Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G518200.1 | Wheat | cytosol | 99.59 | 99.49 |
| TraesCS7B01G434300.1 | Wheat | cytosol | 98.76 | 98.76 |
| HORVU7Hr1G115590.10 | Barley | nucleus | 90.73 | 88.19 |
| KXG20466 | Sorghum | cytosol | 84.35 | 83.57 |
| Zm00001d036749_P001 | Maize | cytosol | 83.32 | 82.97 |
| Os06t0643800-01 | Rice | plasma membrane | 15.65 | 82.61 |
| TraesCS6D01G133800.1 | Wheat | cytosol | 81.57 | 82.16 |
| Zm00001d046595_P002 | Maize | cytosol | 75.49 | 74.95 |
| Zm00001d016399_P002 | Maize | extracellular | 10.71 | 66.24 |
| CDX88168 | Canola | nucleus | 61.07 | 61.77 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 67.35 | 61.76 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 67.25 | 61.55 |
| CDX80498 | Canola | cytosol | 61.28 | 61.53 |
| CDX70382 | Canola | cytosol | 60.87 | 61.43 |
| CDX92473 | Canola | cytosol | 60.56 | 60.87 |
| CDY35815 | Canola | cytosol | 60.45 | 60.77 |
| CDY45096 | Canola | cytosol | 60.45 | 60.39 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 63.44 | 58.56 |
| KRH20178 | Soybean | nucleus | 63.23 | 57.98 |
| TraesCS3D01G013000.1 | Wheat | nucleus | 63.54 | 57.72 |
| PGSC0003DMT400071807 | Potato | cytosol | 62.62 | 57.69 |
| KRH03629 | Soybean | endoplasmic reticulum | 62.82 | 57.6 |
| Solyc07g007790.2.1 | Tomato | cytosol | 62.2 | 57.31 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 62.41 | 57.28 |
| AT5G20280.1 | Thale cress | cytosol | 61.17 | 56.95 |
| Bra009830.1-P | Field mustard | nucleus | 61.38 | 56.92 |
| Bra002289.1-P | Field mustard | cytosol | 60.87 | 56.72 |
| Bra020096.1-P | Field mustard | cytosol | 60.04 | 56.6 |
| CDX78411 | Canola | cytosol | 60.45 | 56.5 |
| Bra006090.1-P | Field mustard | cytosol | 60.35 | 56.4 |
| AT5G11110.1 | Thale cress | cytosol | 60.66 | 56.26 |
| Solyc08g042000.2.1 | Tomato | nucleus | 60.04 | 55.79 |
| TraesCS3D01G420300.1 | Wheat | nucleus | 50.05 | 45.38 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 24.1 | 44.83 |
| TraesCS4D01G088200.1 | Wheat | cytosol, golgi, unclear | 46.86 | 43.13 |
| TraesCS4D01G169800.1 | Wheat | cytosol | 16.17 | 19.41 |
| TraesCS2D01G175600.1 | Wheat | golgi, unclear | 16.37 | 19.11 |
| TraesCS7D01G036600.2 | Wheat | golgi | 15.86 | 18.9 |
| TraesCS7D01G159800.1 | Wheat | mitochondrion | 16.07 | 18.89 |
| TraesCS7D01G552800.1 | Wheat | cytosol | 15.65 | 17.65 |
| TraesCS6D01G403800.1 | Wheat | cytosol | 15.76 | 17.65 |
| TraesCS2D01G403600.1 | Wheat | cytosol | 15.35 | 17.21 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.1000 | Gene3D:3.40.50.2000 | Gene3D:3.90.1070.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 | GO:GO:0046524 | InterPro:Glyco_trans_1 | InterPro:HAD_sf |
| InterPro:IPR023214 | PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF406 |
| InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 |
| EnsemblPlantsGene:TraesCS7D01G508100 | EnsemblPlants:TraesCS7D01G508100.1 | TIGR:cd03800 | TIGR:cd16419 | SEG:seg | : |
Description
No Description!
Coordinates
chr7D:+:611814391..611822181
Molecular Weight (calculated)
108547.0 Da
IEP (calculated)
7.651
GRAVY (calculated)
-0.306
Length
971 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGNDNWINS YLDAILDAGK GAGSGSGGGG AGGGGDRPSL LLRERGHFSP ARYFVEEVIT GYDETDLYKT WSRANAMRSP QERNTRLENM TWRIWNLARK
101: KKEVEDAKRL KRRLETEKPR TDATAEMSED LFEGEKGEDA GDASVAYGDS SAGNTPRISA VDKLYIVLIS LHGLVRGENL ELGRDSDTSG QVKYVVELAK
201: ALSSCPGVYR VDLLTRQILA PNYDRGYGEP SETLVPTSFK NLKQERGENS GAYITRIPFG PKDKYLAKEH LWPYVQEFVD GALSHIVHMS KIIGEEIGCG
301: HPMWPAVIHG HYASAGVAAA LISGALNVHM VFTGHFLGKD KLEGLLKQGR QTREEINMTY KIMRRIEAEE LSLDASEIVI ASTRQEIEEQ WNLYDGFEVM
401: LARKLRARVK RGANCYGRYM PRMVIIPPGV EFGHMIHEFD MEGEEDSHSP ASEDPPIWSE IMRFFTNPRK PLILAVARPY PEKNITTLVK AFGECRPLRE
501: LANLTLIMGN REAISKMSNM SAAVLTSVLT LIDEYDLYGQ VAYPKHHKHS EVLDIYRLAA RTKGAFVNVA YFEQFGVTLI EAAMHGLPVI ATKNGAPVEI
601: HQVLDNGLLV DPHDQHAIAD ALYKLLSDKQ LWSRCRENGL KNIHRFSWPE HCKNYLSRIL TLSPRYPAFP GNEDQIKAPI KGRKCIIVIA VDSASKKDLV
701: CIIKNSIEAT RKETLSGSTG FVLSTSLTMS EIHSLLISAG MAPTDFDAFI CNSGSDLFYP SRAGDSPSTS RVTFALDRTY QSHIEYRWGG EGLRKYLVKW
801: ASSIVERRGR TEKQVIFEDA EHSSTCCFAF RVVNPNYLPP LKELQKLMRI QSLRCHALYN HSATRLSVIP IHASRSQALR YLSVRWGIEL RNVVILVGES
901: GDSDYEELFG GLHKTIVLKG EFNTPANRIH TVRRYPLQDV IALDCSNIIG VEGCSTDVLT PTLKTLGIPT K
101: KKEVEDAKRL KRRLETEKPR TDATAEMSED LFEGEKGEDA GDASVAYGDS SAGNTPRISA VDKLYIVLIS LHGLVRGENL ELGRDSDTSG QVKYVVELAK
201: ALSSCPGVYR VDLLTRQILA PNYDRGYGEP SETLVPTSFK NLKQERGENS GAYITRIPFG PKDKYLAKEH LWPYVQEFVD GALSHIVHMS KIIGEEIGCG
301: HPMWPAVIHG HYASAGVAAA LISGALNVHM VFTGHFLGKD KLEGLLKQGR QTREEINMTY KIMRRIEAEE LSLDASEIVI ASTRQEIEEQ WNLYDGFEVM
401: LARKLRARVK RGANCYGRYM PRMVIIPPGV EFGHMIHEFD MEGEEDSHSP ASEDPPIWSE IMRFFTNPRK PLILAVARPY PEKNITTLVK AFGECRPLRE
501: LANLTLIMGN REAISKMSNM SAAVLTSVLT LIDEYDLYGQ VAYPKHHKHS EVLDIYRLAA RTKGAFVNVA YFEQFGVTLI EAAMHGLPVI ATKNGAPVEI
601: HQVLDNGLLV DPHDQHAIAD ALYKLLSDKQ LWSRCRENGL KNIHRFSWPE HCKNYLSRIL TLSPRYPAFP GNEDQIKAPI KGRKCIIVIA VDSASKKDLV
701: CIIKNSIEAT RKETLSGSTG FVLSTSLTMS EIHSLLISAG MAPTDFDAFI CNSGSDLFYP SRAGDSPSTS RVTFALDRTY QSHIEYRWGG EGLRKYLVKW
801: ASSIVERRGR TEKQVIFEDA EHSSTCCFAF RVVNPNYLPP LKELQKLMRI QSLRCHALYN HSATRLSVIP IHASRSQALR YLSVRWGIEL RNVVILVGES
901: GDSDYEELFG GLHKTIVLKG EFNTPANRIH TVRRYPLQDV IALDCSNIIG VEGCSTDVLT PTLKTLGIPT K
0001: MARNDWINSY LEAILDVGTS KKKRFESNSK IVQKLGDINS KDHQEKVFGD MNGKDHQEKV FSPIKYFVEE VVNSFDESDL YKTWIKVIAT RNTRERSNRL
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
Arabidopsis Description
SPS4Probable sucrose-phosphate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JLK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.