Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29640 | Sorghum | cytosol | 97.41 | 97.41 |
| TraesCS6A01G144800.1 | Wheat | cytoskeleton, cytosol, nucleus | 89.52 | 89.52 |
| TraesCS6D01G133800.1 | Wheat | cytosol | 88.9 | 88.9 |
| Os02t0184400-01 | Rice | endoplasmic reticulum, golgi | 92.84 | 88.53 |
| HORVU6Hr1G028330.1 | Barley | endoplasmic reticulum, golgi | 89.52 | 83.62 |
| TraesCS6B01G173000.2 | Wheat | endoplasmic reticulum, plasma membrane | 89.63 | 83.08 |
| Zm00001d036749_P001 | Maize | cytosol | 82.57 | 81.64 |
| Zm00001d046595_P002 | Maize | cytosol | 75.41 | 74.34 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 68.57 | 62.42 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 68.15 | 61.92 |
| CDX88168 | Canola | nucleus | 61.62 | 61.88 |
| CDX80498 | Canola | cytosol | 62.03 | 61.84 |
| CDX70382 | Canola | cytosol | 61.51 | 61.64 |
| CDX92473 | Canola | cytosol | 61.2 | 61.08 |
| CDY35815 | Canola | cytosol | 61.1 | 60.97 |
| CDY45096 | Canola | cytosol | 60.68 | 60.19 |
| Zm00001d016399_P002 | Maize | extracellular | 9.65 | 59.24 |
| Zm00001d050125_P002 | Maize | nucleus | 64.94 | 59.11 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 63.8 | 58.46 |
| KRH03629 | Soybean | endoplasmic reticulum | 63.38 | 57.7 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 63.17 | 57.56 |
| KRH20178 | Soybean | nucleus | 63.07 | 57.41 |
| PGSC0003DMT400071807 | Potato | cytosol | 62.76 | 57.4 |
| Solyc07g007790.2.1 | Tomato | cytosol | 62.34 | 57.02 |
| Bra009830.1-P | Field mustard | nucleus | 61.93 | 57.02 |
| CDX78411 | Canola | cytosol | 61.31 | 56.88 |
| Bra002289.1-P | Field mustard | cytosol | 61.41 | 56.81 |
| Bra006090.1-P | Field mustard | cytosol | 61.2 | 56.79 |
| AT5G20280.1 | Thale cress | cytosol | 61.31 | 56.66 |
| Bra020096.1-P | Field mustard | cytosol | 60.17 | 56.31 |
| AT5G11110.1 | Thale cress | cytosol | 61.1 | 56.26 |
| Solyc08g042000.2.1 | Tomato | nucleus | 60.37 | 55.69 |
| Zm00001d012036_P001 | Maize | nucleus | 52.7 | 47.57 |
| Zm00001d042353_P003 | Maize | nucleus | 52.07 | 46.52 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 23.65 | 43.68 |
| Zm00001d048979_P001 | Maize | cytosol | 44.5 | 42.02 |
| Zm00001d029091_P003 | Maize | cytosol | 16.8 | 19.66 |
| Zm00001d045042_P014 | Maize | cytosol, mitochondrion | 16.49 | 19.34 |
| Zm00001d010801_P001 | Maize | cytosol | 4.88 | 19.18 |
| Zm00001d029087_P002 | Maize | cytosol | 16.8 | 19.08 |
| Zm00001d047253_P003 | Maize | cytosol | 15.66 | 18.5 |
| Zm00001d051837_P002 | Maize | cytosol | 16.29 | 18.45 |
| Zm00001d050151_P001 | Maize | cytosol | 1.24 | 8.76 |
| Zm00001d014119_P001 | Maize | cytosol | 1.35 | 8.5 |
Protein Annotations
| KEGG:00500+2.4.1.14 | EntrezGene:103626734 | MapMan:3.1.2.7 | Gene3D:3.40.50.2000 | UniProt:A0A1D6H2R7 | ProteinID:AQK69131.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0046524 |
| InterPro:Glyco_trans_1 | PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF347 |
| InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 |
| UniParc:UPI0004DEC95D | EnsemblPlantsGene:Zm00001d015570 | EnsemblPlants:Zm00001d015570_P002 | EnsemblPlants:Zm00001d015570_T002 | SEG:seg | : |
Description
Sucrose-phosphate synthase 1
Coordinates
chr5:+:98828050..98835540
Molecular Weight (calculated)
108023.0 Da
IEP (calculated)
7.439
GRAVY (calculated)
-0.331
Length
964 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGNDNWINS YLDAILDAGK AAIGGDRPSL LLRERGHFSP ARYFVEEVIT GYDETDLYKT WLRANAMRSP QERNTRLENM TWRIWNLARK KKEFEKEEAC
101: RMSKRQPETE KTRADATADM SEDLFEGEKG EDAGDPSVAY GDSTTGSSPK TSSIDKLYIV LISLHGLVRG ENMELGRDSD TGGQIKYVVE LAKALSSSPG
201: VYRVDLLTRQ ILAPNFDRSY GEPKELLVST SGKNYKQEKG ENSGAYIIRI PFGPKDKYLA KEHLWPFIQE FVDGALSHIV RMSKAIGEET GRGHPVWPAV
301: IHGHYASAGI AAALLSGALN LPMAFTGHFL GKDKLEGLLK QGRQTREQIN MTYKIMCRIE AEELSLDASE IVIASTRQEI EEQWNLYDGF EVILARKLRA
401: RVKRGANCYG RFMPRMVIIP PGVEFGHIIH DFDMDGEEEN PCPASEDPPI WSQIMRFFTN PRKPMILAVA RPYPEKNITT LVKAFGECRP LRELANLTLI
501: MGNREAISKM HNMSAAVLTS VLTLIDEYDL YGQVAYPKHH KHSEVPDIYR LAARTKGAFV NVAYFEQFGV TLIEAAMNGL PIIATKNGAP VEINQVLNNG
601: LLVDPHDQNA IADALYKLLS DKHLWSRCRE NGLTNIHQFS WPEHCKNYLS RILTLGPRSP AIGNREERSN TPISGRKNII VISVDSVNKE GLVRIIRNAI
701: EVIHKENMSG STGFVLSTSL TISEIHSLLL SGGMLPTDFD AFICNSGSNI YYPSHSGETS NNSKITFALD QNHQSHIEYR WGGEGLRKYL VKWATSVVER
801: KGRTERQIIF EDPEHSSAYC LAFRVVNPNH LPPLKELRKL MRIQSLRCNA LYNHSATRLS VVPIHASRSQ ALRYLCIRLG IEVPNVAVLV GESGDSDYEE
901: LLGGLHRTVI LKGEFNIAAN RIHTVRRYPL QDVVALDSSN IIGVDGYTTD DLRSALQQMG ILAR
101: RMSKRQPETE KTRADATADM SEDLFEGEKG EDAGDPSVAY GDSTTGSSPK TSSIDKLYIV LISLHGLVRG ENMELGRDSD TGGQIKYVVE LAKALSSSPG
201: VYRVDLLTRQ ILAPNFDRSY GEPKELLVST SGKNYKQEKG ENSGAYIIRI PFGPKDKYLA KEHLWPFIQE FVDGALSHIV RMSKAIGEET GRGHPVWPAV
301: IHGHYASAGI AAALLSGALN LPMAFTGHFL GKDKLEGLLK QGRQTREQIN MTYKIMCRIE AEELSLDASE IVIASTRQEI EEQWNLYDGF EVILARKLRA
401: RVKRGANCYG RFMPRMVIIP PGVEFGHIIH DFDMDGEEEN PCPASEDPPI WSQIMRFFTN PRKPMILAVA RPYPEKNITT LVKAFGECRP LRELANLTLI
501: MGNREAISKM HNMSAAVLTS VLTLIDEYDL YGQVAYPKHH KHSEVPDIYR LAARTKGAFV NVAYFEQFGV TLIEAAMNGL PIIATKNGAP VEINQVLNNG
601: LLVDPHDQNA IADALYKLLS DKHLWSRCRE NGLTNIHQFS WPEHCKNYLS RILTLGPRSP AIGNREERSN TPISGRKNII VISVDSVNKE GLVRIIRNAI
701: EVIHKENMSG STGFVLSTSL TISEIHSLLL SGGMLPTDFD AFICNSGSNI YYPSHSGETS NNSKITFALD QNHQSHIEYR WGGEGLRKYL VKWATSVVER
801: KGRTERQIIF EDPEHSSAYC LAFRVVNPNH LPPLKELRKL MRIQSLRCNA LYNHSATRLS VVPIHASRSQ ALRYLCIRLG IEVPNVAVLV GESGDSDYEE
901: LLGGLHRTVI LKGEFNIAAN RIHTVRRYPL QDVVALDSSN IIGVDGYTTD DLRSALQQMG ILAR
0001: MARNDWINSY LEAILDVGTS KKKRFESNSK IVQKLGDINS KDHQEKVFGD MNGKDHQEKV FSPIKYFVEE VVNSFDESDL YKTWIKVIAT RNTRERSNRL
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
Arabidopsis Description
SPS4Probable sucrose-phosphate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JLK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.