Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015570_P002 | Maize | cytosol | 97.41 | 97.41 |
| TraesCS6A01G144800.1 | Wheat | cytoskeleton, cytosol, nucleus | 90.25 | 90.25 |
| TraesCS6D01G133800.1 | Wheat | cytosol | 89.63 | 89.63 |
| Os02t0184400-01 | Rice | endoplasmic reticulum, golgi | 93.46 | 89.12 |
| HORVU6Hr1G028330.1 | Barley | endoplasmic reticulum, golgi | 90.35 | 84.4 |
| TraesCS6B01G173000.2 | Wheat | endoplasmic reticulum, plasma membrane | 90.35 | 83.75 |
| KXG20466 | Sorghum | cytosol | 84.44 | 83.06 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 68.15 | 62.04 |
| CDX88168 | Canola | nucleus | 61.62 | 61.88 |
| CDX80498 | Canola | cytosol | 62.03 | 61.84 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 67.84 | 61.64 |
| CDX70382 | Canola | cytosol | 61.41 | 61.54 |
| CDX92473 | Canola | cytosol | 60.58 | 60.46 |
| CDY35815 | Canola | cytosol | 60.48 | 60.35 |
| CDY45096 | Canola | cytosol | 59.96 | 59.47 |
| OQU78428 | Sorghum | nucleus | 64.94 | 58.5 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 63.28 | 57.98 |
| KRH20178 | Soybean | nucleus | 62.97 | 57.32 |
| KRH03629 | Soybean | endoplasmic reticulum | 62.97 | 57.32 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 62.76 | 57.18 |
| Bra009830.1-P | Field mustard | nucleus | 61.93 | 57.02 |
| PGSC0003DMT400071807 | Potato | cytosol | 62.14 | 56.83 |
| CDX78411 | Canola | cytosol | 61.2 | 56.79 |
| Bra006090.1-P | Field mustard | cytosol | 61.1 | 56.69 |
| Solyc07g007790.2.1 | Tomato | cytosol | 61.72 | 56.45 |
| AT5G11110.1 | Thale cress | cytosol | 61.1 | 56.26 |
| Bra002289.1-P | Field mustard | cytosol | 60.79 | 56.24 |
| AT5G20280.1 | Thale cress | cytosol | 60.58 | 55.99 |
| Bra020096.1-P | Field mustard | cytosol | 59.44 | 55.63 |
| Solyc08g042000.2.1 | Tomato | nucleus | 60.06 | 55.41 |
| EES04111 | Sorghum | nucleus | 53.11 | 47.36 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 23.44 | 43.3 |
| KXG28137 | Sorghum | cytosol | 47.61 | 42.9 |
| EER92301 | Sorghum | cytosol | 16.8 | 20.02 |
| KXG19528 | Sorghum | mitochondrion | 16.6 | 19.95 |
| OQU92441 | Sorghum | cytosol | 15.66 | 18.5 |
| KXG31429 | Sorghum | cytosol | 16.18 | 18.08 |
| OQU77175 | Sorghum | plastid | 16.29 | 17.5 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.2000 | UniProt:A0A194YP74 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004044 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0046524 | InterPro:Glyco_trans_1 |
| EnsemblPlants:KXG29640 | ProteinID:KXG29640 | ProteinID:KXG29640.1 | PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF347 | MetaCyc:PWY-7238 | MetaCyc:PWY-7347 | EnsemblPlantsGene:SORBI_3004G068400 | InterPro:SPP_N |
| InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 | UniParc:UPI0003C6D13B |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:5572016..5578763
Molecular Weight (calculated)
108119.0 Da
IEP (calculated)
7.183
GRAVY (calculated)
-0.333
Length
964 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGNDNWINS YLDAILDAGK AAIGGDRPSL LLRERGHFSP ARYFVEEVIT GYDETDLYKT WLRANAMRSP QERNTRLENM TWRIWNLARK KKEFEKEEAC
101: RLSKRQPETE KTRADATADM SEDLFEGEKG EDAGDPSVAY GDSTTGSSPK TSSIDKLYIV LISLHGLVRG ENMELGRDSD TGGQVKYVVE LAKALSSSPG
201: VYRVDLLTRQ ILAPNFDRSY GEPAELLVST SGKNSKQEKG ENSGAYIIRL PFGPKDKYLA KEHLWPFIQE FVDGALSHIV RMSKAIGEET GRVHPVWPAV
301: IHGHYASAGI AAALLSGALN LPMAFTGHFL GKDKLEGLLK QGRQTREQIN MTYKIMCRIE AEELSLDASE IVIASTRQEI EEQWNLYDGF EVILARKLRA
401: RVKRGANCYG RFMPRMVIIP PGVEFGHIIH DFDMDGEEEN PSPASEDPPI WSQIMRFFTN PRKPMILAVA RPYPEKNITT LVKAFGECRP LRELANLTLI
501: MGNREAISKM HNMSAAVLTS VLTLIDEYDL YGQVAYPKHH KHSEVPDIYR LAARTKGAFV NVAYFEQFGV TLIEAAMNGL PIIATKNGAP VEINQVLNNG
601: LLVDPHDQNA IADALYKLLS DKQLWSRCRE NGLTNIHRFS WPEHCKNYLS RILTLGPRSP AIGNREERSN TPISGRRQII VISVDSVNKE DLVRIIRNAI
701: EVIHTQNMSS STGFVLSTSL TISEINSLLL SGGMLPTDFD AFICNSGSNI YYPSYSGETP NNSKITFALD QNHQSHIEYR WGGEGLRKYL VKWATSVVER
801: KGRTERQIIF EDPEHSSAYC LAFRVVNPNH LPPLKELRKL MRIQSLRCNA LYNHSATRLS VVPIHASRSQ ALRYLCIRWG IEVPNVAVLV GESGDSDYEE
901: LLGGLHRTII LKGEFNIPAN RIHTVRRYPL QDVVALDSSN IIGVEGYTTD DLKSALQQMG ILTQ
101: RLSKRQPETE KTRADATADM SEDLFEGEKG EDAGDPSVAY GDSTTGSSPK TSSIDKLYIV LISLHGLVRG ENMELGRDSD TGGQVKYVVE LAKALSSSPG
201: VYRVDLLTRQ ILAPNFDRSY GEPAELLVST SGKNSKQEKG ENSGAYIIRL PFGPKDKYLA KEHLWPFIQE FVDGALSHIV RMSKAIGEET GRVHPVWPAV
301: IHGHYASAGI AAALLSGALN LPMAFTGHFL GKDKLEGLLK QGRQTREQIN MTYKIMCRIE AEELSLDASE IVIASTRQEI EEQWNLYDGF EVILARKLRA
401: RVKRGANCYG RFMPRMVIIP PGVEFGHIIH DFDMDGEEEN PSPASEDPPI WSQIMRFFTN PRKPMILAVA RPYPEKNITT LVKAFGECRP LRELANLTLI
501: MGNREAISKM HNMSAAVLTS VLTLIDEYDL YGQVAYPKHH KHSEVPDIYR LAARTKGAFV NVAYFEQFGV TLIEAAMNGL PIIATKNGAP VEINQVLNNG
601: LLVDPHDQNA IADALYKLLS DKQLWSRCRE NGLTNIHRFS WPEHCKNYLS RILTLGPRSP AIGNREERSN TPISGRRQII VISVDSVNKE DLVRIIRNAI
701: EVIHTQNMSS STGFVLSTSL TISEINSLLL SGGMLPTDFD AFICNSGSNI YYPSYSGETP NNSKITFALD QNHQSHIEYR WGGEGLRKYL VKWATSVVER
801: KGRTERQIIF EDPEHSSAYC LAFRVVNPNH LPPLKELRKL MRIQSLRCNA LYNHSATRLS VVPIHASRSQ ALRYLCIRWG IEVPNVAVLV GESGDSDYEE
901: LLGGLHRTII LKGEFNIPAN RIHTVRRYPL QDVVALDSSN IIGVEGYTTD DLKSALQQMG ILTQ
0001: MARNDWINSY LEAILDVGTS KKKRFESNSK IVQKLGDINS KDHQEKVFGD MNGKDHQEKV FSPIKYFVEE VVNSFDESDL YKTWIKVIAT RNTRERSNRL
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
Arabidopsis Description
SPS4Probable sucrose-phosphate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JLK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.