CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050151_P001	Maize	cytosol	13.94	91.24
Os04t0249500-00	Rice	cytosol	85.17	90.52
Os04t0309600-01	Rice	cytosol, plasma membrane	84.95	90.28
TraesCS7B01G482200.1	Wheat	cytosol	85.62	89.2
TraesCS7D01G552800.1	Wheat	cytosol	85.62	89.2
TraesCS2A01G406700.1	Wheat	cytosol	85.62	88.89
TraesCS2B01G424300.1	Wheat	cytosol	85.62	88.89
TraesCS7A01G557600.1	Wheat	cytosol	85.17	88.73
HORVU7Hr1G120520.1	Barley	cytosol	85.17	88.53
TraesCS2D01G403600.1	Wheat	cytosol	85.4	88.45
Zm00001d014119_P001	Maize	cytosol	14.94	87.58
GSMUA_Achr3P13980_001	Banana	cytosol	72.46	77.01
GSMUA_Achr9P21240_001	Banana	cytosol	72.46	77.01
PGSC0003DMT400079728	Potato	cytosol	14.72	75.0
KXG31429	Sorghum	cytosol	70.79	73.58
KRH17270	Soybean	cytosol	65.55	70.0
KRH72916	Soybean	cytosol	65.44	69.88
VIT_04s0079g00230.t01	Wine grape	cytosol	65.89	69.78
PGSC0003DMT400043117	Potato	cytosol	64.77	69.17
VIT_17s0053g00700.t01	Wine grape	cytosol	69.01	68.32
CDY71780	Canola	cytosol, extracellular	26.76	67.42
KRH30890	Soybean	cytosol	62.54	66.39
Solyc02g081300.2.1	Tomato	cytosol, nucleus	65.22	66.18
Bra039502.1-P	Field mustard	cytosol	61.32	65.71
AT5G37180.1	Thale cress	cytosol	61.2	65.59
CDY38565	Canola	cytosol	61.32	65.01
CDY26996	Canola	cytosol	61.2	64.89
Solyc03g098290.2.1	Tomato	cytosol, nucleus	63.88	64.31
KRH09470	Soybean	cytosol, plastid	64.77	63.15
KRH38924	Soybean	plastid	64.66	62.98
CDX72985	Canola	cytosol	61.98	59.53
CDX96472	Canola	cytosol	61.54	59.04
Bra015995.1-P	Field mustard	cytosol	61.98	58.96
Bra003845.1-P	Field mustard	cytosol	61.76	58.94
CDX68228	Canola	cytosol	61.43	58.62
AT1G73370.1	Thale cress	cytosol	61.54	58.6
CDY11107	Canola	cytosol	61.32	58.51
EER92301	Sorghum	cytosol	51.62	57.23
KXG19528	Sorghum	mitochondrion	50.72	56.73
OQU92441	Sorghum	cytosol	50.84	55.88
KXG29640	Sorghum	cytosol	17.5	16.29
EES04111	Sorghum	nucleus	19.29	16.0
KXG20466	Sorghum	cytosol	17.28	15.82
OQU78428	Sorghum	nucleus	18.17	15.23
KXG28137	Sorghum	cytosol	16.95	14.21

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	UniProt:A0A1W0VVA4
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_1
EnsemblPlants:OQU77175	ProteinID:OQU77175	ProteinID:OQU77175.1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526
PANTHER:PTHR12526:SF546	MetaCyc:PWY-3801	EnsemblPlantsGene:SORBI_3010G276700	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn
TIGRFAMs:TIGR02470	UniParc:UPI0009DC8945	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:60979154..60983631

Molecular Weight (calculated)

102481.0 Da

IEP (calculated)

7.854

GRAVY (calculated)

-0.366

Length

897 amino acids

Sequence
(BLAST)

001: MLPSFYKLLP MDTQPVTASQ HSSFSSIETI TFFSTLFLSK PTMASKLSFK RTDSLAESMP DALRQSRYQM KKCFQRYVSK GRRLLKNQQL IEELEKSLDD
101: KVEKEKLVEG FLGYIICSTQ EAVVLPPYVA FAVRMNPGIW EYVKVHSEDL SVEGITPSEY LKFKETLYDE NWAKDDNSLE VDFGALDLST PHLTLPSSIG
201: NGLQFVSKFM SSKLGDKPEI SMKPLLDYLL SLNYRGEKLM VNDTIDTVNK LQTALLLAEV FVSGLPRYTP FLKFEQRFQE WGLEKGWGDT AERCKETLNC
301: LSEVLQAPDP INMEKFFSRV PSTFNIVIFS IHGYFGQEKV LGLPDTGGQV VYILDQVRAL EEELLQRIKL QGLNVTPKIL VLTRLIPDAK GTKCNVELEP
401: VENTKHSHIL RVPFKTEDGK ELRQWVSRFD IYPYLERYAQ DSCAKILDIL EGKPDLIIGN YTDGNLVASL MSSKLGVTQG TIAHALEKTK YEDSDVKWRD
501: LDQKYHFSCQ FTADMIAMNT SDFIITSTYQ EIAGSKEKPG QYEHHYAFTM PGLCRYATGI NVFDPKFNIA APGADQSIYF PFTQKQKRLT DLHPQIEELL
601: YSKQDTNEHI GYLADRNKPI IFSMARLDKV KNITGLVEWY GQNKRLRDLV NLVVVAGLLE ASQSKDREEI EEINKMHSLI DMYQLKGQIR WIKAQTDRVR
701: NGELYRCIAD TKGAFVQPAL YEAFGLTVIE AMNCGLTTFA TNQGGPAEII VDGVSGFHIN PMNGREASNK IADFFQKCKE DPSYWNKVST AGLQRIYECY
801: TWKIYATKVL NMGSTYGFWK TLNKEERLAK QRYLQMFYNL QFRNLAKTVP RLFEHPPQAL AGPSTMTVTR PKERQPRTRI QRIMTSLMGQ KSSTSQQ

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.