CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86250	Canola	cytosol	96.53	98.86
AT5G49190.1	Thale cress	cytosol	93.93	93.93
VIT_12s0057g00130.t01	Wine grape	cytosol	18.46	84.18
VIT_00s1562g00010.t01	Wine grape	cytosol	18.34	83.62
VIT_05s0077g01930.t01	Wine grape	cytosol	82.65	82.55
VIT_10s0071g00070.t01	Wine grape	cytosol	8.18	81.48
KRH12090	Soybean	endoplasmic reticulum	75.84	76.31
GSMUA_Achr8P22470_001	Banana	cytosol	76.33	76.14
GSMUA_Achr3P08200_001	Banana	mitochondrion	16.85	75.14
CDY52781	Canola	mitochondrion	74.47	74.11
CDY22042	Canola	cytosol, mitochondrion	74.47	74.11
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	74.23	74.04
GSMUA_Achr3P08190_001	Banana	cytosol	57.0	73.72
EER92301	Sorghum	cytosol	73.73	73.55
TraesCS4D01G169800.1	Wheat	cytosol	73.61	73.42
HORVU4Hr1G049500.3	Barley	cytosol	73.48	73.21
TraesCS4A01G140000.1	Wheat	cytosol, golgi, unclear	73.11	72.93
TraesCS4B01G167500.1	Wheat	cytosol	72.86	72.68
Zm00001d029091_P003	Maize	cytosol	73.85	72.33
Zm00001d029087_P002	Maize	cytosol	73.85	70.2
CDX88838	Canola	endoplasmic reticulum, golgi	63.82	69.31
CDX70945	Canola	cytosol	66.79	66.87
CDX92432	Canola	cytosol	66.05	66.21
CDY16569	Canola	cytosol	65.92	66.09
VIT_10s0071g00080.t01	Wine grape	cytosol	6.07	63.64
CDX87785	Canola	cytosol	12.52	62.73
Zm00001d010801_P001	Maize	cytosol	18.59	61.22
CDY71780	Canola	cytosol, extracellular	22.92	51.97
CDY38565	Canola	cytosol	53.9	51.42
CDY26996	Canola	cytosol	53.53	51.06
CDX72985	Canola	cytosol	54.89	47.43
CDX96472	Canola	cytosol	54.52	47.06
CDX68228	Canola	cytosol	54.52	46.81
CDY11107	Canola	cytosol	54.28	46.6
CDY46981	Canola	cytosol, nucleus, plastid	17.22	40.52
CDX73329	Canola	cytosol	2.23	23.68
CDX94270	Canola	nucleus	10.66	18.18
CDY35815	Canola	cytosol	20.57	17.18
CDX92473	Canola	cytosol	20.57	17.18
CDY45096	Canola	cytosol	20.57	17.08
CDX70382	Canola	cytosol	20.32	17.05
CDX88168	Canola	nucleus	19.83	16.67
CDX80498	Canola	cytosol	19.83	16.55
CDX78411	Canola	cytosol	20.94	16.27
CDX89776	Canola	cytosol	21.07	15.98
CDY18270	Canola	cytosol	21.07	15.96
CDY41124	Canola	cytosol	19.58	15.09
CDY69825	Canola	cytosol	0.74	3.45

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:A0A078DDM7
EnsemblPlants:CDX85398	ProteinID:CDX85398	ProteinID:CDX85398.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016157	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00143079001	InterPro:Glyco_trans_1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF509
MetaCyc:PWY-3801	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI0004EEEC1A

Description

BnaC07g27090D

Coordinates

chrLK031841:-:1556877..1561108

Molecular Weight (calculated)

92141.4 Da

IEP (calculated)

6.392

GRAVY (calculated)

-0.248

Length

807 amino acids

Sequence
(BLAST)

001: MPTGRFETMR EWVHDAISAQ RNELLSLFSR YVAQGKGILQ SHQLIDEFLK TVKVDGTTED LKNRPFMKVL QSAEEAIVLP PFVALAIRPR PGVREYVRVN
101: VYELSVDHLT VSEYLRFKEE LVNGHANGNY LLELDFEPFN ATFPRPTRSS SIGNGVQFLN RHLSSIMFRN KDSLEPLLEF LRTHKHDGRA MMLNDRIQNI
201: RTLQEALARA EEFLSKLPLA TPYSEFEFEL QGMGFERGWG DTAQKVSEMV HLLLDILQAP DPSVLETFLG RIPMVFNVVI LSPHGYFGQA NVLGLPDTGG
301: QVVYILDQVR ALESEMLLRI QKQGLDVTPK ILIVTRLIPE AEGTTCNQRL EKVSGTEHTH ILRIPFRTEK GILRKWISRF DVWPYLETFA EDASNEIAAE
401: LQSVPNLIIG NYSDGNLVAS LLACKLGVIQ CNIAHALEKT KYPESDIYWR NHEDKYHFAS QFTADLIAMN NADFIITSTY QEIAGSKNKV GQYESHTAFT
501: LPGLYRVVHG INVFDPKFNI VSPGADMTIY FPYSDKERRL TALHESIEEL LFSSEQNVEH VGFLSDQLKP IIFSMARLDR VKNLTGLVEC YAKNSKLREV
601: ANLVVVGGYV DVNQSRDREE MAEIQKMHSL IKQYGLHGEF RWIAAQMNRA RNGELYRYIA DTKGVFVQPA FYEAFGLTVV ESMTCGLPTF ATCHGGPAEI
701: IENGVSGFHI DPYHPEQLAT TLVSFFETCN ADPSHWEKIS DGGLKRIYER YTWKKYSERL LTLAGVYSFW KHVSKLERRE TRRYLEMFYS LKYRDLANSI
801: PLATDEH

Best Arabidopsis Sequence Match ( AT5G49190.1 )
(BLAST)

001: MPTGRFETMR EWVYDAISAQ RNELLSLFSR YVAQGKGILQ SHQLIDEFLK TVKVDGTLED LNKSPFMKVL QSAEEAIVLP PFVALAIRPR PGVREYVRVN
101: VYELSVDHLT VSEYLRFKEE LVNGHANGDY LLELDFEPFN ATLPRPTRSS SIGNGVQFLN RHLSSIMFRN KESMEPLLEF LRTHKHDGRP MMLNDRIQNI
201: PILQGALARA EEFLSKLPLA TPYSEFEFEL QGMGFERGWG DTAQKVSEMV HLLLDILQAP DPSVLETFLG RIPMVFNVVI LSPHGYFGQA NVLGLPDTGG
301: QVVYILDQVR ALENEMLLRI QKQGLEVIPK ILIVTRLLPE AKGTTCNQRL ERVSGTEHAH ILRIPFRTEK GILRKWISRF DVWPYLETFA EDASNEISAE
401: LQGVPNLIIG NYSDGNLVAS LLASKLGVIQ CNIAHALEKT KYPESDIYWR NHEDKYHFSS QFTADLIAMN NADFIITSTY QEIAGSKNNV GQYESHTAFT
501: MPGLYRVVHG IDVFDPKFNI VSPGADMTIY FPYSDKERRL TALHESIEEL LFSAEQNDEH VGLLSDQSKP IIFSMARLDR VKNLTGLVEC YAKNSKLREL
601: ANLVIVGGYI DENQSRDREE MAEIQKMHSL IEQYDLHGEF RWIAAQMNRA RNGELYRYIA DTKGVFVQPA FYEAFGLTVV ESMTCALPTF ATCHGGPAEI
701: IENGVSGFHI DPYHPDQVAA TLVSFFETCN TNPNHWVKIS EGGLKRIYER YTWKKYSERL LTLAGVYAFW KHVSKLERRE TRRYLEMFYS LKFRDLANSI
801: PLATDEN

Arabidopsis Description

SUS2Sucrose synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q00917]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.