Factsheet for VIT_10s0071g00070.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0071g00080.t01	Wine grape	cytosol	51.85	54.55
VIT_00s1562g00010.t01	Wine grape	cytosol	97.53	44.63
VIT_12s0057g00130.t01	Wine grape	cytosol	96.3	44.07
Zm00001d010801_P001	Maize	cytosol	54.32	17.96
GSMUA_Achr3P08190_001	Banana	cytosol	80.25	10.42
VIT_05s0077g01930.t01	Wine grape	cytosol	88.89	8.91
AT5G49190.1	Thale cress	cytosol	83.95	8.43
GSMUA_Achr8P22470_001	Banana	cytosol	83.95	8.41
Bra037432.1-P	Field mustard	cytosol	82.72	8.3
CDX85398	Canola	cytosol	81.48	8.18
VIT_07s0005g00750.t01	Wine grape	cytosol	81.48	8.14
KRH12090	Soybean	endoplasmic reticulum	79.01	7.98
TraesCS4A01G140000.1	Wheat	cytosol, golgi, unclear	79.01	7.91
TraesCS4D01G169800.1	Wheat	cytosol	79.01	7.91
EER92301	Sorghum	cytosol	79.01	7.91
HORVU4Hr1G049500.3	Barley	cytosol	79.01	7.9
TraesCS4B01G167500.1	Wheat	cytosol	77.78	7.79
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	76.54	7.66
Zm00001d029091_P003	Maize	cytosol	76.54	7.52
VIT_11s0016g00470.t01	Wine grape	cytosol	75.31	7.48
Zm00001d029087_P002	Maize	cytosol	76.54	7.3
CDX86250	Canola	cytosol	61.73	6.35
VIT_04s0079g00230.t01	Wine grape	cytosol	65.43	6.26
VIT_17s0053g00700.t01	Wine grape	cytosol	58.02	5.19
VIT_11s0118g00200.t01	Wine grape	cytosol	19.75	1.52
VIT_18s0089g00410.t01	Wine grape	cytosol	18.52	1.46
VIT_05s0029g01140.t01	Wine grape	cytosol	18.52	1.41
VIT_04s0008g05730.t01	Wine grape	cytosol	17.28	1.32
VIT_18s0075g00350.t01	Wine grape	cytosol	1.23	0.7
VIT_18s0075g00340.t01	Wine grape	plastid	0.0	0.0
GSMUA_Achr3P08200_001	Banana	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:3.40.50.2000	MapMan:35.1	ProteinID:CCB58897	ProteinID:CCB58897.1	UniProt:F6HW33	EMBL:FN596260
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005975	GO:GO:0005985	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016157	GO:GO:0016740
PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF509	InterPro:Sucrose_synth	UniParc:UPI0002109F4D	ArrayExpress:VIT_10s0071g00070
EnsemblPlantsGene:VIT_10s0071g00070	EnsemblPlants:VIT_10s0071g00070.t01	:	:	:	:

Description

No Description!

Coordinates

chr10:+:16130687..16131415

Molecular Weight (calculated)

9408.0 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.486

Length

81 amino acids

Sequence
(BLAST)

1: MEKTKYPESD IYWRKFEDKY HFSSQFTADL IAMNNADSII TSTYQEIAGS KNHVGQYESR TTFTLLGLHR VVHGIDFLSQ V

Best Arabidopsis Sequence Match ( AT5G49190.3 )
(BLAST)

001: MKVLQSAEEA IVLPPFVALA IRPRPGVREY VRVNVYELSV DHLTVSEYLR FKEELVNGHA NGDYLLELDF EPFNATLPRP TRSSSIGNGV QFLNRHLSSI
101: MFRNKESMEP LLEFLRTHKH DGRPMMLNDR IQNIPILQGA LARAEEFLSK LPLATPYSEF EFELQGMGFE RGWGDTAQKV SEMVHLLLDI LQAPDPSVLE
201: TFLGRIPMVF NVVILSPHGY FGQANVLGLP DTGGQVVYIL DQVRALENEM LLRIQKQGLE VIPKILIVTR LLPEAKGTTC NQRLERVSGT EHAHILRIPF
301: RTEKGILRKW ISRFDVWPYL ETFAEDASNE ISAELQGVPN LIIGNYSDGN LVASLLASKL GVIQCNIAHA LEKTKYPESD IYWRNHEDKY HFSSQFTADL
401: IAMNNADFII TSTYQEIAGS KNNVGQYESH TAFTMPGLYR VVHGIDVFDP KFNIVSPGAD MTIYFPYSDK ERRLTALHES IEELLFSAEQ NDEHVGLLSD
501: QSKPIIFSMA RLDRVKNLTG LVECYAKNSK LRELANLVIV GGYIDENQSR DREEMAEIQK MHSLIEQYDL HGEFRWIAAQ MNRARNGELY RYIADTKGVF
601: VQPAFYEAFG LTVVESMTCA LPTFATCHGG PAEIIENGVS GFHIDPYHPD QVAATLVSFF ETCNTNPNHW VKISEGGLKR IYERYTWKKY SERLLTLAGV
701: YAFWKHVSKL ERRETRRYLE MFYSLKFRDL ANSIPLATDE N

Arabidopsis Description

SUS2Sucrose synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q00917]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.