Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400049042 | Potato | cytosol | 24.74 | 81.82 |
| CDX73329 | Canola | cytosol | 8.46 | 52.63 |
| Bra033195.1-P | Field mustard | cytosol | 93.45 | 42.22 |
| CDY41124 | Canola | cytosol | 93.45 | 42.22 |
| AT4G10120.3 | Thale cress | cytosol | 87.95 | 39.62 |
| VIT_18s0089g00410.t01 | Wine grape | cytosol | 72.73 | 33.59 |
| KRH56446 | Soybean | cytosol | 71.25 | 32.5 |
| Solyc11g045110.1.1 | Tomato | cytosol | 65.96 | 31.2 |
| GSMUA_Achr6P17480_001 | Banana | nucleus | 67.44 | 30.58 |
| CDY35815 | Canola | cytosol | 57.72 | 28.26 |
| CDX92473 | Canola | cytosol | 57.51 | 28.16 |
| CDY45096 | Canola | cytosol | 57.29 | 27.88 |
| CDX89776 | Canola | cytosol | 61.1 | 27.16 |
| CDY18270 | Canola | cytosol | 61.1 | 27.14 |
| CDX88168 | Canola | nucleus | 54.76 | 26.98 |
| CDX80498 | Canola | cytosol | 54.97 | 26.89 |
| KRH62455 | Soybean | cytosol | 43.97 | 26.77 |
| CDX70382 | Canola | cytosol | 54.12 | 26.61 |
| CDX78411 | Canola | cytosol | 53.91 | 24.54 |
| CDY71780 | Canola | cytosol, extracellular | 10.99 | 14.61 |
| CDX88838 | Canola | endoplasmic reticulum, golgi | 17.97 | 11.44 |
| CDX70945 | Canola | cytosol | 19.03 | 11.17 |
| CDY16569 | Canola | cytosol | 18.6 | 10.93 |
| CDX92432 | Canola | cytosol | 18.6 | 10.93 |
| CDY22042 | Canola | cytosol, mitochondrion | 18.6 | 10.85 |
| CDY52781 | Canola | mitochondrion | 18.6 | 10.85 |
| CDX86250 | Canola | cytosol | 17.76 | 10.66 |
| CDX85398 | Canola | cytosol | 18.18 | 10.66 |
| CDY26996 | Canola | cytosol | 17.76 | 9.93 |
| CDY38565 | Canola | cytosol | 17.76 | 9.93 |
| CDX72985 | Canola | cytosol | 17.55 | 8.89 |
| CDY11107 | Canola | cytosol | 17.34 | 8.72 |
| CDX68228 | Canola | cytosol | 17.34 | 8.72 |
| CDX96472 | Canola | cytosol | 16.91 | 8.56 |
| CDY46981 | Canola | cytosol, nucleus, plastid | 3.59 | 4.96 |
| CDY69825 | Canola | cytosol | 1.48 | 4.02 |
| CDX87785 | Canola | cytosol | 0.63 | 1.86 |
| PGSC0003DMT400049047 | Potato | golgi, mitochondrion, plastid | 2.11 | 1.8 |
Protein Annotations
| EnsemblPlants:CDX94270 | EnsemblPlantsGene:GSBRNA2T00157325001 | Gene3D:3.40.50.2000 | GO:A0A078DY56 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016157 |
| GO:GO:0016740 | InterPro:Sucrose_synth | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF358 | PFAM:PF00862 | ProteinID:CDX94270 |
| ProteinID:CDX94270.1 | SEG:seg | SUPFAM:SSF53756 | UniParc:UPI0004EF389D | MapMan:3.1.2.7 | : |
Description
BnaC02g29300D
Coordinates
chrLK031880:-:1085850..1087928
Molecular Weight (calculated)
53821.1 Da
IEP (calculated)
8.064
GRAVY (calculated)
-0.623
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MARNEWINSY LEAILDVGTS NKKRFESNSK IVQKLGDMNR KEPQEKVFSP IKYFVEEVVN SFDESDLYKT WIKVIATRNT RERSNRLENI CWRIWHLARK
101: KKQIVWDDGI RLSKRRDERE KGRNDAEEDL SELSEGEKEK SDAVTTLEPP RDQMPRIRSE MQIWSEDDKS SRNLYIVPAS ICSMHGLVRG ENMELGRDSD
201: TGGQVKYVVE LARALANTEG VHRVDLLTRQ ISSPEVDSSY GEPVEMLSCP PEGSGSCGSY IIRIPCGSRD KYIAKESLWP HIHEFVDGAL NHIVDIARSL
301: GEQVNGGKPI WPYVIHGHYA DAGEVAAHLA GTLNVPMVLT GHSLGRNKFE QLLKQGRITR EDINKTYKIM RRIEAEELSL DAAEMVVTST RQEIEAQWGL
401: YDGFDIKLER KLRVRRRRGV TCFGRYMPRM VVCLLFSRAE PSRPTPSRAE PSRAEPSRPD GGGGARVGSS LFL
101: KKQIVWDDGI RLSKRRDERE KGRNDAEEDL SELSEGEKEK SDAVTTLEPP RDQMPRIRSE MQIWSEDDKS SRNLYIVPAS ICSMHGLVRG ENMELGRDSD
201: TGGQVKYVVE LARALANTEG VHRVDLLTRQ ISSPEVDSSY GEPVEMLSCP PEGSGSCGSY IIRIPCGSRD KYIAKESLWP HIHEFVDGAL NHIVDIARSL
301: GEQVNGGKPI WPYVIHGHYA DAGEVAAHLA GTLNVPMVLT GHSLGRNKFE QLLKQGRITR EDINKTYKIM RRIEAEELSL DAAEMVVTST RQEIEAQWGL
401: YDGFDIKLER KLRVRRRRGV TCFGRYMPRM VVCLLFSRAE PSRPTPSRAE PSRAEPSRPD GGGGARVGSS LFL
0001: MAGNEWINGY LEAILDSQAQ GIEETQQKPQ ASVNLREGDG QYFNPTKYFV EEVVTGVDET DLHRTWLKVV ATRNSRERNS RLENMCWRIW HLTRKKKQLE
0101: WEDSQRIANR RLEREQGRRD ATEDLSEDLS EGEKGDGLGE IVQPETPRRQ LQRNLSNLEI WSDDKKENRL YVVLISLHGL VRGENMELGS DSDTGGQVKY
0201: VVELARALAR MPGVYRVDLF TRQICSSEVD WSYAEPTEML TTAEDCDGDE TGESSGAYII RIPFGPRDKY LNKEILWPFV QEFVDGALAH ILNMSKVLGE
0301: QIGKGKPVWP YVIHGHYADA GDSAALLSGA LNVPMVLTGH SLGRNKLEQL LKQGRQSKED INSTYKIKRR IEAEELSLDA AELVITSTRQ EIDEQWGLYD
0401: GFDVKLEKVL RARARRGVNC HGRFMPRMAV IPPGMDFTNV EVQEDTPEGD GDLASLVGGT EGSSPKAVPT IWSEVMRFFT NPHKPMILAL SRPDPKKNIT
0501: TLLKAFGECR PLRELANLTL IMGNRDDIDE LSSGNASVLT TVLKLIDKYD LYGSVAYPKH HKQSDVPDIY RLAANTKGVF INPALVEPFG LTLIEAAAHG
0601: LPMVATKNGG PVDIHRALHN GLLVDPHDQE AIANALLKLV SEKNLWHECR INGWKNIHLF SWPEHCRTYL TRIAACRMRH PQWQTDADEV AAQDDEFSLN
0701: DSLKDVQDMS LRLSMDGDKP SLNGSLEPNS ADPVKQIMSR MRTPEIKSKP ELQGKKQSDN LGSKYPVLRR RERLVVLAVD CYDNEGAPDE KAMVPMIQNI
0801: IKAVRSDPQM AKNSGFAIST SMPLDELTRF LKSAKIQVSE FDTLICSSGS EVYYPGGEEG KLLPDPDYSS HIDYRWGMEG LKNTVWKLMN TTAVGGEARN
0901: KGSPSLIQED QASSNSHCVA YMIKDRSKVM RVDDLRQKLR LRGLRCHPMY CRNSTRMQIV PLLASRSQAL RYLFVRWRLN VANMYVVVGD RGDTDYEELI
1001: SGTHKTVIVK GLVTLGSDAL LRSTDLRDDI VPSESPFIGF LKVDSPVKEI TDIFKQLSKA TA
0101: WEDSQRIANR RLEREQGRRD ATEDLSEDLS EGEKGDGLGE IVQPETPRRQ LQRNLSNLEI WSDDKKENRL YVVLISLHGL VRGENMELGS DSDTGGQVKY
0201: VVELARALAR MPGVYRVDLF TRQICSSEVD WSYAEPTEML TTAEDCDGDE TGESSGAYII RIPFGPRDKY LNKEILWPFV QEFVDGALAH ILNMSKVLGE
0301: QIGKGKPVWP YVIHGHYADA GDSAALLSGA LNVPMVLTGH SLGRNKLEQL LKQGRQSKED INSTYKIKRR IEAEELSLDA AELVITSTRQ EIDEQWGLYD
0401: GFDVKLEKVL RARARRGVNC HGRFMPRMAV IPPGMDFTNV EVQEDTPEGD GDLASLVGGT EGSSPKAVPT IWSEVMRFFT NPHKPMILAL SRPDPKKNIT
0501: TLLKAFGECR PLRELANLTL IMGNRDDIDE LSSGNASVLT TVLKLIDKYD LYGSVAYPKH HKQSDVPDIY RLAANTKGVF INPALVEPFG LTLIEAAAHG
0601: LPMVATKNGG PVDIHRALHN GLLVDPHDQE AIANALLKLV SEKNLWHECR INGWKNIHLF SWPEHCRTYL TRIAACRMRH PQWQTDADEV AAQDDEFSLN
0701: DSLKDVQDMS LRLSMDGDKP SLNGSLEPNS ADPVKQIMSR MRTPEIKSKP ELQGKKQSDN LGSKYPVLRR RERLVVLAVD CYDNEGAPDE KAMVPMIQNI
0801: IKAVRSDPQM AKNSGFAIST SMPLDELTRF LKSAKIQVSE FDTLICSSGS EVYYPGGEEG KLLPDPDYSS HIDYRWGMEG LKNTVWKLMN TTAVGGEARN
0901: KGSPSLIQED QASSNSHCVA YMIKDRSKVM RVDDLRQKLR LRGLRCHPMY CRNSTRMQIV PLLASRSQAL RYLFVRWRLN VANMYVVVGD RGDTDYEELI
1001: SGTHKTVIVK GLVTLGSDAL LRSTDLRDDI VPSESPFIGF LKVDSPVKEI TDIFKQLSKA TA
Arabidopsis Description
SPS3SPS3F [Source:UniProtKB/TrEMBL;Acc:A0A178WKI5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.