CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006578.1-P	Field mustard	cytosol	98.38	90.69
CDX70945	Canola	cytosol	97.98	90.32
CDX92432	Canola	cytosol	95.69	88.32
CDY16569	Canola	cytosol	95.56	88.2
AT5G20830.1	Thale cress	cytosol	92.87	85.4
HORVU0Hr1G019020.1	Barley	cytosol	16.42	81.88
KRH19379	Soybean	cytosol	85.33	78.76
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	84.93	78.39
KRH12615	Soybean	endoplasmic reticulum	83.85	77.3
KRH37557	Soybean	endoplasmic reticulum	82.64	75.8
PGSC0003DMT400007505	Potato	cytosol	80.75	74.53
VIT_11s0016g00470.t01	Wine grape	cytosol	81.7	74.48
Solyc12g009300.1.1	Tomato	nucleus	80.48	74.29
Solyc07g042550.2.1	Tomato	extracellular	79.54	73.42
PGSC0003DMT400035262	Potato	cytosol	79.0	72.65
KXG19528	Sorghum	mitochondrion	75.64	70.07
GSMUA_Achr7P19810_001	Banana	mitochondrion	76.45	69.61
GSMUA_Achr2P21870_001	Banana	cytosol	75.91	69.2
GSMUA_Achr6P10890_001	Banana	unclear	75.91	69.2
TraesCS7A01G158900.1	Wheat	golgi, nucleus	75.24	69.18
Os06t0194900-03	Rice	extracellular	75.24	69.18
HORVU7Hr1G033230.2	Barley	mitochondrion	75.1	68.97
Zm00001d045042_P014	Maize	cytosol, mitochondrion	75.91	68.61
Zm00001d047253_P003	Maize	cytosol	74.97	68.26
OQU92441	Sorghum	cytosol	74.97	68.26
GSMUA_Achr3P01900_001	Banana	mitochondrion	74.97	68.26
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	74.97	68.26
TraesCS7D01G036600.2	Wheat	golgi	74.83	68.22
Solyc07g042520.2.1	Tomato	cytosol, extracellular	73.62	68.12
TraesCS4A01G446700.1	Wheat	cytosol	74.7	68.1
HORVU7Hr1G007220.8	Barley	cytosol	74.7	68.1
TraesCS7A01G040900.2	Wheat	cytosol	74.7	68.1
PGSC0003DMT400035264	Potato	cytosol	73.49	68.0
Os03t0401300-01	Rice	extracellular	74.16	67.52
HORVU2Hr1G030870.1	Barley	plasma membrane	74.02	67.4
Os07t0616800-01	Rice	cytosol	74.02	67.4
TraesCS7B01G063400.1	Wheat	mitochondrion	74.7	67.19
TraesCS7D01G159800.1	Wheat	mitochondrion	74.7	67.19
TraesCS2B01G194200.1	Wheat	golgi	74.56	66.67
TraesCS2A01G168200.1	Wheat	golgi, unclear	74.56	66.67
TraesCS2D01G175600.1	Wheat	golgi, unclear	74.43	66.47
CDY22042	Canola	cytosol, mitochondrion	69.72	63.87
CDX85398	Canola	cytosol	69.31	63.82
CDY52781	Canola	mitochondrion	69.58	63.75
CDX86250	Canola	cytosol	67.29	63.45
HORVU5Hr1G050660.1	Barley	cytosol	3.36	62.5
CDY26996	Canola	cytosol	55.99	49.17
CDY71780	Canola	cytosol, extracellular	23.55	49.16
CDY38565	Canola	cytosol	55.85	49.05
CDX87785	Canola	cytosol	10.09	46.58
CDX72985	Canola	cytosol	58.14	46.25
CDX96472	Canola	cytosol	58.01	46.1
CDY11107	Canola	cytosol	57.2	45.21
CDX68228	Canola	cytosol	57.07	45.11
CDY46981	Canola	cytosol, nucleus, plastid	14.54	31.49
CDX73329	Canola	cytosol	2.42	23.68
CDX94270	Canola	nucleus	11.44	17.97
CDX70382	Canola	cytosol	21.4	16.53
CDX88168	Canola	nucleus	21.0	16.25
CDX80498	Canola	cytosol	21.0	16.13
CDY35815	Canola	cytosol	20.73	15.94
CDX92473	Canola	cytosol	20.59	15.84
CDX89776	Canola	cytosol	22.34	15.6
CDX78411	Canola	cytosol	21.8	15.59
CDY18270	Canola	cytosol	22.34	15.59
CDY45096	Canola	cytosol	20.32	15.54
CDY41124	Canola	cytosol	21.0	14.9
CDY69825	Canola	cytosol	0.67	2.87

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:A0A078DNP2
EnsemblPlants:CDX88838	ProteinID:CDX88838	ProteinID:CDX88838.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016157	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00148916001	InterPro:Glyco_trans_1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF391
MetaCyc:PWY-3801	SUPFAM:SSF53756	SignalP:SignalP-noTM	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470
UniParc:UPI0004EF386B	SEG:seg	:	:	:	:

Description

BnaA03g08110D

Coordinates

chrLK031856:+:1184792..1188358

Molecular Weight (calculated)

85437.0 Da

IEP (calculated)

6.006

GRAVY (calculated)

-0.264

Length

743 amino acids

Sequence
(BLAST)

001: MVVRVLVFLV VKEAIVLPPW VALAVRPRPG VWEYIRVNLH ALVVEELQPA EFLHFKEELV DGVKNGDFTL ELDFEPFNAS VPRPTLPKYI GDGVEFLNRH
101: LSAKLFHEKD SLLPLLKFLQ LHSHQGKTLM LNEKIQNLNT LQHILRKAEE YLAKLSPETP YEDFEAKFEE IGLERGWGNN AERVLDMLRL LLDLLEAPDP
201: CTLETFLGRI PMVFNVVILS PHGYFAQDNV LGYPDTGGQV VYILDQVRAL ETEMLQRIKQ QGLDITPRIL ILTRLLPDAV GTTCGERLER VDGSEYCDIL
301: RVPFRTEKGI VRKWISRFEV WPYLETYTED AAVELAKELK GKPDLIIGNY SDGNLVASLL AHKLGVTQCT IAHALEKTKY PDSDIYWKKL DDKYHFSCQF
401: TADLFAMNHT DFIITSTLQE IAGSKDTVGQ YESHTAFTLP GLYRVVHGID VFDPKFNIVS PGADMSIYFP YTEEKRRLTK FHPEIEELLY SDVENQEHLC
501: VLKDKKKPIL FTMARLDRVK NLSGLVEWYG KNKRLRELVN LVVVGGDRRK ESKDNEEKAE MKRMYDLIDE YKLNGQFRWI SSQMNRVRNG ELYRYICDTK
601: GAFVQPALYE AFGLTVVEAM TCGLPTFATC KGGPAEIIVH GKSGFHIDPY HGDQAADTLA DFFTKCKEDP SHWDEISKGG LQRIEEKYTW QIYSQRLLTL
701: TGVYGFWKHV SNLDRLESRR YLEMFYALKY RPLAKAVPLA EEE

Best Arabidopsis Sequence Match ( AT5G20830.3 )
(BLAST)

001: MANAERMITR VHSQRERLNE TLVSERNEVL ALLSRVEAKG KGILQQNQII AEFEALPEQT RKKLEGGPFF DLLKSTQEAI VLPPWVALAV RPRPGVWEYL
101: RVNLHALVVE ELQPAEFLHF KEELVDGVKN GNFTLELDFE PFNASIPRPT LHKYIGNGVD FLNRHLSAKL FHDKESLLPL LKFLRLHSHQ GKNLMLSEKI
201: QNLNTLQHTL RKAEEYLAEL KSETLYEEFE AKFEEIGLER GWGDNAERVL DMIRLLLDLL EAPDPCTLET FLGRVPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALEIEML QRIKQQGLNI KPRILILTRL LPDAVGTTCG ERLERVYDSE YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TYTEDAAVEL
401: SKELNGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDDKYH FSCQFTADIF AMNHTDFIIT STFQEIAGSK ETVGQYESHT
501: AFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFPYTEEK RRLTKFHSEI EELLYSDVEN KEHLCVLKDK KKPILFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELANLVVVG GDRRKESKDN EEKAEMKKMY DLIEEYKLNG QFRWISSQMD RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCKGGPA
701: EIIVHGKSGF HIDPYHGDQA ADTLADFFTK CKEDPSHWDE ISKGGLQRIE EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LEARRYLEMF YALKYRPLAQ
801: AVPLAQDD

Arabidopsis Description

SUS1Sucrose synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P49040]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.