Factsheet for Bra036282.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra036282.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02280.1	Bra036282.1-P	AT4G02280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22042	Canola	cytosol, mitochondrion	99.63	99.63
AT4G02280.1	Thale cress	mitochondrion	93.83	94.07
KRG96468	Soybean	cytosol, endoplasmic reticulum, nucleus	82.0	81.9
VIT_07s0005g00750.t01	Wine grape	cytosol	81.75	81.75
KRH68215	Soybean	cytosol, endoplasmic reticulum, nucleus	81.63	81.53
GSMUA_Achr8P22470_001	Banana	cytosol	79.9	80.1
EER92301	Sorghum	cytosol	79.28	79.48
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	79.04	79.23
TraesCS4D01G169800.1	Wheat	cytosol	78.55	78.74
GSMUA_Achr3P08200_001	Banana	mitochondrion	17.51	78.45
Zm00001d029091_P003	Maize	cytosol	79.41	78.16
HORVU4Hr1G049500.3	Barley	cytosol	78.05	78.15
Solyc09g098590.2.1	Tomato	cytosol	78.18	78.08
PGSC0003DMT400017087	Potato	cytosol	78.05	78.05
TraesCS4A01G140000.1	Wheat	cytosol, golgi, unclear	77.81	78.0
TraesCS4B01G167500.1	Wheat	cytosol	77.44	77.63
GSMUA_Achr3P08190_001	Banana	cytosol	59.31	77.08
Zm00001d029087_P002	Maize	cytosol	79.28	75.74
Bra037432.1-P	Field mustard	cytosol	74.11	74.47
Bra002332.1-P	Field mustard	cytosol	65.97	68.07
Bra006578.1-P	Field mustard	cytosol	67.45	67.87
Zm00001d010801_P001	Maize	cytosol	19.36	64.08
Bra039502.1-P	Field mustard	cytosol	55.12	53.41
Bra003845.1-P	Field mustard	cytosol	56.1	48.4
Bra015995.1-P	Field mustard	cytosol	55.86	48.04
Bra002289.1-P	Field mustard	cytosol	21.33	16.6
Bra006090.1-P	Field mustard	cytosol	20.84	16.27
Bra009830.1-P	Field mustard	nucleus	20.72	16.05
Bra020096.1-P	Field mustard	cytosol	20.35	16.02
Bra033195.1-P	Field mustard	cytosol	19.11	14.8
Bra015364.1-P	Field mustard	cytosol	15.04	14.29

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	EnsemblPlantsGene:Bra036282
EnsemblPlants:Bra036282.1	EnsemblPlants:Bra036282.1-P	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0005982	GO:GO:0005985	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009414	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0010431	GO:GO:0010555
GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_1	UniProt:M4F5C6	PFAM:PF00534
PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF509	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn
TIGRFAMs:TIGR02470	UniParc:UPI0002541F9A	:	:	:	:

Description

AT4G02280 (E=0.0) SUS3, ATSUS3 | SUS3 (sucrose synthase 3); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups

Coordinates

chrA09:-:295403..299326

Molecular Weight (calculated)

92341.7 Da

IEP (calculated)

6.147

GRAVY (calculated)

-0.274

Length

811 amino acids

Sequence
(BLAST)

001: MSNPKLTRIL SMRDRVQDTL SAHRNELVAL LSRYVDQGKG ILQPHNLIDE LESIIGDDDA RKKSLSDGPF GEILKSAMEA IVIPPFVALA VRPRQGVWEY
101: VRVNVYELSV EQLTVSEYLC FKEELVDGAS SSDPFCLELD FEPFNANVPR PSRSSSIGNG VQFLNRHLSS VMFRNKDCLE PLLDFLRVHK YKGHPLMLND
201: RIQSIYRLQS QLSKAEDHIS KLPEETPFSE FEYSIQGMGF EKGWGDTAAR VLEMMYLLSD ILQAPDPSSL EKFLGMVPMV FNVVILSPHG YFGQANVLGL
301: PDTGGQVVYI LDQVRALETE MLLRIKRQGL DITPRILIVT RLIPDAKGTT CNQRLERVSG TEHTHILRVP FRSDKGILRK WISRFDVWPY LENYAQDAAS
401: EIVGELRGVP DFIIGNYSDG NLVASLMAHK MGVTQCTIAH ALEKTKYPDS DIYWKDFDNK YHFSCQFTAD LIAMNNADFI ITSTYQEIAG TKNTVGQYES
501: HGAFTLPGLY RVVHGIDVFD PKFNIVSPGA DMTIYFPFTE SEKRLTALHG SIEEMLYSPE QTDEHVGTLS DRSKPLLFSM ARLDKVKNIS GLVEMYGKNT
601: KLRELVNLVV IAGNIDVNKS KDREEISEIE KMHGLIKNYK LEGQFRWITA QTNRARNGEL YRYIADTKGA FAQPAFYEAF GLTVVEAMTC GLPTFATLHG
701: GPAEIIEHGV SGFHIDPYHP EQAGNIMAEF FQRCKEDPNH WNKVSDSGLQ RIYERYTWKI YSERLMTLAG VYGFWKYVSK LERRETRRYL EMFYILKFRD
801: LVKTVPLSDD E

Best Arabidopsis Sequence Match ( AT4G02280.1 )
(BLAST)

001: MANPKLTRVL STRDRVQDTL SAHRNELVAL LSRYVDQGKG ILQPHNLIDE LESVIGDDET KKSLSDGPFG EILKSAMEAI VVPPFVALAV RPRPGVWEYV
101: RVNVFELSVE QLTVSEYLRF KEELVDGPNS DPFCLELDFE PFNANVPRPS RSSSIGNGVQ FLNRHLSSVM FRNKDCLEPL LDFLRVHKYK GHPLMLNDRI
201: QSISRLQIQL SKAEDHISKL SQETPFSEFE YALQGMGFEK GWGDTAGRVL EMMHLLSDIL QAPDPSSLEK FLGMVPMVFN VVILSPHGYF GQANVLGLPD
301: TGGQVVYILD QVRALETEML LRIKRQGLDI SPSILIVTRL IPDAKGTTCN QRLERVSGTE HTHILRVPFR SEKGILRKWI SRFDVWPYLE NYAQDAASEI
401: VGELQGVPDF IIGNYSDGNL VASLMAHRMG VTQCTIAHAL EKTKYPDSDI YWKDFDNKYH FSCQFTADLI AMNNADFIIT STYQEIAGTK NTVGQYESHG
501: AFTLPGLYRV VHGIDVFDPK FNIVSPGADM TIYFPYSEET RRLTALHGSI EEMLYSPDQT DEHVGTLSDR SKPILFSMAR LDKVKNISGL VEMYSKNTKL
601: RELVNLVVIA GNIDVNKSKD REEIVEIEKM HNLMKNYKLD GQFRWITAQT NRARNGELYR YIADTRGAFA QPAFYEAFGL TVVEAMTCGL PTFATCHGGP
701: AEIIEHGLSG FHIDPYHPEQ AGNIMADFFE RCKEDPNHWK KVSDAGLQRI YERYTWKIYS ERLMTLAGVY GFWKYVSKLE RRETRRYLEM FYILKFRDLV
801: KTVPSTADD

Arabidopsis Description

SUS3Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6L8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.