Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G461800.1 | Wheat | nucleus | 92.85 | 86.25 |
| TraesCS3D01G420300.1 | Wheat | nucleus | 92.85 | 86.09 |
| TraesCS3A01G425500.1 | Wheat | nucleus | 92.85 | 85.85 |
| Zm00001d012036_P001 | Maize | nucleus | 82.58 | 76.78 |
| EES04111 | Sorghum | nucleus | 83.08 | 76.32 |
| Zm00001d042353_P003 | Maize | nucleus | 82.58 | 76.0 |
| Os01t0919400-01 | Rice | plasma membrane | 82.88 | 75.92 |
| Bra015364.1-P | Field mustard | cytosol | 56.5 | 65.69 |
| GSMUA_Achr4P16070_001 | Banana | nucleus | 71.2 | 65.34 |
| VIT_05s0029g01140.t01 | Wine grape | cytosol | 67.17 | 62.51 |
| PGSC0003DMT400067951 | Potato | nucleus | 66.57 | 62.12 |
| Solyc09g092130.2.1 | Tomato | nucleus, unclear | 66.47 | 62.03 |
| KRH14493 | Soybean | cytosol | 65.26 | 60.96 |
| KRG98934 | Soybean | cytosol | 64.05 | 60.4 |
| KRH46034 | Soybean | cytosol | 64.15 | 60.38 |
| AT1G04920.1 | Thale cress | cytosol | 64.25 | 60.08 |
| CDX89776 | Canola | cytosol | 64.25 | 59.96 |
| CDY18270 | Canola | cytosol | 64.25 | 59.91 |
| HORVU4Hr1G015570.3 | Barley | cytosol | 50.96 | 47.92 |
| HORVU3Hr1G002280.1 | Barley | plastid | 51.26 | 45.04 |
| HORVU7Hr1G115590.10 | Barley | nucleus | 44.01 | 43.74 |
| HORVU6Hr1G028330.1 | Barley | endoplasmic reticulum, golgi | 44.61 | 42.93 |
| HORVU0Hr1G019020.1 | Barley | cytosol | 3.12 | 20.81 |
| HORVU4Hr1G049500.3 | Barley | cytosol | 16.52 | 20.25 |
| HORVU7Hr1G033230.2 | Barley | mitochondrion | 16.21 | 19.9 |
| HORVU7Hr1G007220.8 | Barley | cytosol | 16.01 | 19.51 |
| HORVU2Hr1G030870.1 | Barley | plasma membrane | 16.01 | 19.49 |
| HORVU6Hr1G094880.6 | Barley | cytosol | 15.71 | 18.12 |
| HORVU7Hr1G120520.1 | Barley | cytosol | 15.71 | 18.08 |
| HORVU5Hr1G050660.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.2000 | UniProt:A0A287MCC2 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016157 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0046524 | InterPro:Glyco_trans_1 | EnsemblPlantsGene:HORVU3Hr1G093830 |
| EnsemblPlants:HORVU3Hr1G093830.2 | PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF360 |
| InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 |
| UniParc:UPI000B486467 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:644135497..644140302
Molecular Weight (calculated)
110367.0 Da
IEP (calculated)
6.333
GRAVY (calculated)
-0.367
Length
993 amino acids
Sequence
(BLAST)
(BLAST)
001: QLEIEGIQRM SARQKEQEQV RREATEDLAE DLSEGEKGDI VGELMPSGTP KKKFQRNFSD LSVWSDENKE KKLYIVLISV HGLVRGENME LGSDSDTGGQ
101: VNRTEHLVTQ NVSYNSDMHD LRSVISCFQV KYVVELARAL AMMPGVYRVD LFTRQVSSPE VDWSYGEPTE MLTSGPQDAE GSGESAGAYI VRIPCGPSTK
201: YIKKESLWPY LQEFVDGALA HILNMSKVLG EQVGHGKPVL PYVIHGHYAD AGDVAALLSG ALNVPMVLTG HSLGRNKLEQ IMKQGRMSKE EIDATYKIMR
301: RIEGEELALD AAELVITSTR QEIDEQWGLY DGFDVKLEKV LRARTRRGVS CHGRFMPRMM VIPPGMDFSN VVVQDIDGDG DKDDINLDGA SPRSLPPIWA
401: EVMRFLTNPH KPMILALSRP DPKKNITTLV KAFGECRPLR ELANLVLIMG NRDDIDEMPP GNANVLTTVL KLVDKYDLYG SVAFPKHHNQ ADVPEIYRLT
501: AKTKGVFINP ALVEPFGLTL IEAAAHGLPI VATKNGGPVD ITNALNSGLL VDPHDQNAIA DALLKLVADK NLWQECRKNG LRNIHLYSWP EHCRTYLARV
601: AGCRIRNPRW LKDTPADAGA DDEEALEDSL IEFQDLSLRL SIDGERCSIN EPASSDPQDQ VQKIMNKLHQ SSSGAPDAAV DKNPANVHVA GTVNKYPLLR
701: RRRRLFIVAV DCYGDDGRAS KKMLQVIQEV FRAVRSDTQM SKISGFALST AMPLSETLQL LQMGKVPPTD FDALICGSGS EVYYPGTAQC LDAQGRLRPD
801: QDYLQHINHR WSHDGARQTI GKLMASQDGS GNVVEPDVES CNAHCVSFFV RDPKKVRTID EMRERLRMRG LRCHLMYCRN STRMQVVPLM ASRSQALRYL
901: FVRWGLAVGN MYLIVGEHGD TDREEMLSGL HKTVIVKGVT EKGSEDLLRS SGSYHKEDVV PVDSPLAATT RGELKSDEIM RALKEVSKAS SGM
101: VNRTEHLVTQ NVSYNSDMHD LRSVISCFQV KYVVELARAL AMMPGVYRVD LFTRQVSSPE VDWSYGEPTE MLTSGPQDAE GSGESAGAYI VRIPCGPSTK
201: YIKKESLWPY LQEFVDGALA HILNMSKVLG EQVGHGKPVL PYVIHGHYAD AGDVAALLSG ALNVPMVLTG HSLGRNKLEQ IMKQGRMSKE EIDATYKIMR
301: RIEGEELALD AAELVITSTR QEIDEQWGLY DGFDVKLEKV LRARTRRGVS CHGRFMPRMM VIPPGMDFSN VVVQDIDGDG DKDDINLDGA SPRSLPPIWA
401: EVMRFLTNPH KPMILALSRP DPKKNITTLV KAFGECRPLR ELANLVLIMG NRDDIDEMPP GNANVLTTVL KLVDKYDLYG SVAFPKHHNQ ADVPEIYRLT
501: AKTKGVFINP ALVEPFGLTL IEAAAHGLPI VATKNGGPVD ITNALNSGLL VDPHDQNAIA DALLKLVADK NLWQECRKNG LRNIHLYSWP EHCRTYLARV
601: AGCRIRNPRW LKDTPADAGA DDEEALEDSL IEFQDLSLRL SIDGERCSIN EPASSDPQDQ VQKIMNKLHQ SSSGAPDAAV DKNPANVHVA GTVNKYPLLR
701: RRRRLFIVAV DCYGDDGRAS KKMLQVIQEV FRAVRSDTQM SKISGFALST AMPLSETLQL LQMGKVPPTD FDALICGSGS EVYYPGTAQC LDAQGRLRPD
801: QDYLQHINHR WSHDGARQTI GKLMASQDGS GNVVEPDVES CNAHCVSFFV RDPKKVRTID EMRERLRMRG LRCHLMYCRN STRMQVVPLM ASRSQALRYL
901: FVRWGLAVGN MYLIVGEHGD TDREEMLSGL HKTVIVKGVT EKGSEDLLRS SGSYHKEDVV PVDSPLAATT RGELKSDEIM RALKEVSKAS SGM
0001: MAGNEWINGY LEAILDSQAQ GIEETQQKPQ ASVNLREGDG QYFNPTKYFV EEVVTGVDET DLHRTWLKVV ATRNSRERNS RLENMCWRIW HLTRKKKQLE
0101: WEDSQRIANR RLEREQGRRD ATEDLSEDLS EGEKGDGLGE IVQPETPRRQ LQRNLSNLEI WSDDKKENRL YVVLISLHGL VRGENMELGS DSDTGGQVKY
0201: VVELARALAR MPGVYRVDLF TRQICSSEVD WSYAEPTEML TTAEDCDGDE TGESSGAYII RIPFGPRDKY LNKEILWPFV QEFVDGALAH ILNMSKVLGE
0301: QIGKGKPVWP YVIHGHYADA GDSAALLSGA LNVPMVLTGH SLGRNKLEQL LKQGRQSKED INSTYKIKRR IEAEELSLDA AELVITSTRQ EIDEQWGLYD
0401: GFDVKLEKVL RARARRGVNC HGRFMPRMAV IPPGMDFTNV EVQEDTPEGD GDLASLVGGT EGSSPKAVPT IWSEVMRFFT NPHKPMILAL SRPDPKKNIT
0501: TLLKAFGECR PLRELANLTL IMGNRDDIDE LSSGNASVLT TVLKLIDKYD LYGSVAYPKH HKQSDVPDIY RLAANTKGVF INPALVEPFG LTLIEAAAHG
0601: LPMVATKNGG PVDIHRALHN GLLVDPHDQE AIANALLKLV SEKNLWHECR INGWKNIHLF SWPEHCRTYL TRIAACRMRH PQWQTDADEV AAQDDEFSLN
0701: DSLKDVQDMS LRLSMDGDKP SLNGSLEPNS ADPVKQIMSR MRTPEIKSKP ELQGKKQSDN LGSKYPVLRR RERLVVLAVD CYDNEGAPDE KAMVPMIQNI
0801: IKAVRSDPQM AKNSGFAIST SMPLDELTRF LKSAKIQVSE FDTLICSSGS EVYYPGGEEG KLLPDPDYSS HIDYRWGMEG LKNTVWKLMN TTAVGGEARN
0901: KGSPSLIQED QASSNSHCVA YMIKDRSKVM RVDDLRQKLR LRGLRCHPMY CRNSTRMQIV PLLASRSQAL RYLFVRWRLN VANMYVVVGD RGDTDYEELI
1001: SGTHKTVIVK GLVTLGSDAL LRSTDLRDDI VPSESPFIGF LKVDSPVKEI TDIFKQLSKA TA
0101: WEDSQRIANR RLEREQGRRD ATEDLSEDLS EGEKGDGLGE IVQPETPRRQ LQRNLSNLEI WSDDKKENRL YVVLISLHGL VRGENMELGS DSDTGGQVKY
0201: VVELARALAR MPGVYRVDLF TRQICSSEVD WSYAEPTEML TTAEDCDGDE TGESSGAYII RIPFGPRDKY LNKEILWPFV QEFVDGALAH ILNMSKVLGE
0301: QIGKGKPVWP YVIHGHYADA GDSAALLSGA LNVPMVLTGH SLGRNKLEQL LKQGRQSKED INSTYKIKRR IEAEELSLDA AELVITSTRQ EIDEQWGLYD
0401: GFDVKLEKVL RARARRGVNC HGRFMPRMAV IPPGMDFTNV EVQEDTPEGD GDLASLVGGT EGSSPKAVPT IWSEVMRFFT NPHKPMILAL SRPDPKKNIT
0501: TLLKAFGECR PLRELANLTL IMGNRDDIDE LSSGNASVLT TVLKLIDKYD LYGSVAYPKH HKQSDVPDIY RLAANTKGVF INPALVEPFG LTLIEAAAHG
0601: LPMVATKNGG PVDIHRALHN GLLVDPHDQE AIANALLKLV SEKNLWHECR INGWKNIHLF SWPEHCRTYL TRIAACRMRH PQWQTDADEV AAQDDEFSLN
0701: DSLKDVQDMS LRLSMDGDKP SLNGSLEPNS ADPVKQIMSR MRTPEIKSKP ELQGKKQSDN LGSKYPVLRR RERLVVLAVD CYDNEGAPDE KAMVPMIQNI
0801: IKAVRSDPQM AKNSGFAIST SMPLDELTRF LKSAKIQVSE FDTLICSSGS EVYYPGGEEG KLLPDPDYSS HIDYRWGMEG LKNTVWKLMN TTAVGGEARN
0901: KGSPSLIQED QASSNSHCVA YMIKDRSKVM RVDDLRQKLR LRGLRCHPMY CRNSTRMQIV PLLASRSQAL RYLFVRWRLN VANMYVVVGD RGDTDYEELI
1001: SGTHKTVIVK GLVTLGSDAL LRSTDLRDDI VPSESPFIGF LKVDSPVKEI TDIFKQLSKA TA
Arabidopsis Description
SPS3SPS3F [Source:UniProtKB/TrEMBL;Acc:A0A178WKI5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.