Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039123.1-P | Field mustard | plastid | 82.79 | 84.46 |
| CDY49049 | Canola | plastid | 81.5 | 84.43 |
| CDY37526 | Canola | plastid | 81.31 | 83.79 |
| PGSC0003DMT400069622 | Potato | cytosol | 16.12 | 64.94 |
| Solyc08g044250.1.1 | Tomato | mitochondrion | 3.46 | 63.64 |
| VIT_14s0066g01910.t01 | Wine grape | cytosol | 55.49 | 53.74 |
| PGSC0003DMT400003527 | Potato | plastid | 54.01 | 52.05 |
| GSMUA_Achr10P... | Banana | plastid | 48.57 | 49.15 |
| KRG93409 | Soybean | plastid | 49.55 | 48.78 |
| KRG93411 | Soybean | plastid | 47.18 | 46.13 |
| OQU81723 | Sorghum | plastid | 45.9 | 44.4 |
| Solyc02g087250.2.1 | Tomato | extracellular | 54.3 | 43.54 |
| Zm00001d025633_P007 | Maize | plastid | 44.71 | 43.5 |
| Zm00001d025629_P007 | Maize | plastid | 44.71 | 43.5 |
| Os04t0464800-00 | Rice | plastid | 36.1 | 42.59 |
| TraesCS2B01G346500.1 | Wheat | plastid | 45.5 | 42.4 |
| TraesCS2D01G327400.1 | Wheat | plastid | 45.1 | 42.03 |
| HORVU2Hr1G081140.2 | Barley | plastid | 45.2 | 42.0 |
| TraesCS2A01G335400.1 | Wheat | plastid | 45.2 | 40.88 |
| AT3G23070.1 | Thale cress | plastid | 28.78 | 33.03 |
| AT5G16180.1 | Thale cress | endoplasmic reticulum | 22.65 | 31.81 |
| AT3G18390.1 | Thale cress | plastid | 26.01 | 31.01 |
| AT4G29750.1 | Thale cress | plastid | 25.72 | 30.92 |
| AT4G14510.1 | Thale cress | plastid | 27.4 | 30.54 |
| AT2G28480.1 | Thale cress | mitochondrion | 9.0 | 24.46 |
| AT4G13070.1 | Thale cress | mitochondrion | 8.01 | 23.62 |
| AT3G25440.1 | Thale cress | plastid | 8.8 | 20.05 |
| AT3G27550.2 | Thale cress | mitochondrion | 8.41 | 15.54 |
Protein Annotations
| MapMan:16.12.2.1.2 | Gene3D:3.30.110.60 | EntrezGene:821288 | ProteinID:AAF24608.1 | ProteinID:AEE73657.1 | ArrayExpress:AT3G01370 |
| EnsemblPlantsGene:AT3G01370 | RefSeq:AT3G01370 | TAIR:AT3G01370 | RefSeq:AT3G01370-TAIR-G | EnsemblPlants:AT3G01370.1 | TAIR:AT3G01370.1 |
| Symbol:ATCFM2 | EMBL:AY136347 | Unigene:At.28082 | EMBL:BT010594 | ncoils:Coil | GO:GO:0000372 |
| GO:GO:0000373 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006397 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008380 | GO:GO:0009507 | GO:GO:0009532 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009987 | GO:GO:0030529 | InterPro:IPR001890 | InterPro:IPR035920 | RefSeq:NP_186786.2 | PFAM:PF01985 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS51295 | PANTHER:PTHR31846 | PANTHER:PTHR31846:SF16 | UniProt:Q8L7C2 | InterPro:RNA-binding_CRM | SMART:SM01103 |
| SUPFAM:SSF75471 | UniParc:UPI00000A2282 | InterPro:YhbY_like_sf | SEG:seg | : | : |
Description
CFM2CRM-domain containing factor CFM2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8L7C2]
Coordinates
chr3:+:139011..143782
Molecular Weight (calculated)
113669.0 Da
IEP (calculated)
9.137
GRAVY (calculated)
-0.573
Length
1011 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLLPLFHQQP LILAKTFPDR IFPPFLVPNT LVSRRNVSRA NSGIFCSSAS GRKTLPQSAI QRIAEKLRSL GFVEEKHDSP TRRITGEESG KNSPGEIFVP
0101: LPKQLPIHRV GHTIDTSWST PSYPVPKPGS GTAISRYHEL KRVWKKETEM ERKKEEKVPS LAELTLPPAE LRRLRTVGIR LTKKLKIGKA GITEGIVNGI
0201: HERWRTTEVV KIFCEDISRM NMKRTHDVLE TKTGGLVIWR SGSKILLYRG VNYQYPYFVS DRDLAHEAAS GASSMDQGVV DSREKQSIAE SSAPSITNKM
0301: VKPMLTQGVG SPDKVRFQLP GEVQLVEEAD RLLEGLGPRF TDWWAYDPLP VDGDLLPAVV PDYRRPFRLL PYGVSPKLTD DEMTTIRRLG RPLPCHFALG
0401: RNRNLQGLAV AIVKLWEKCE LAKIAVKRGV QNTNSELMAE ELKWLTGGTL ISRDKDFIVL YRGKDFLPSA VSSAIEERRR QTMIMENSSV HGNKLTENEE
0501: EIKPRAVKED IELEAKDQKD HIQTHQMKSR QRNSPEAILE KTSMKLSMAL EKKANAEKVL ADLENRESPQ LSDIDKEGIT NDEKYMLRKI GLKMKPFLLL
0601: GRRGVFDGTI ENMHLHWKYR ELVKIICNEY SIEAAHKVAE ILEAESGGIL VAVEMVSKGY AIIVYRGKNY ERPQCLRPQT LLSKREALKR SVEAQRRKSL
0701: KLHVLKLSNN IEELNRQLVE DSATNETWSD GESSNMMVEE ETENQHTEPE KAREKIELGY SSDLSVPSSG EENWEDDSEG EVDPLTTSSQ EYQEDESESA
0801: SSQRHEGNSL DSTANLSVFA ETGSANASSF HDRSLPHNSF LNANRKLPGS STGSGSQISA LRERKSENDG LVTDLSNRER LILRKQALKM KKRPPFAVGR
0901: SNVVTGLART LKMHFQKNPL AIVNVKGRAN GTSVQEVIAK LKEETGALLV SQEPSKVILY RGWGAEEEMK SFYPNNNVKS SINLPSTRSF VDDPPHVSPA
1001: LIEAIRLECG L
0101: LPKQLPIHRV GHTIDTSWST PSYPVPKPGS GTAISRYHEL KRVWKKETEM ERKKEEKVPS LAELTLPPAE LRRLRTVGIR LTKKLKIGKA GITEGIVNGI
0201: HERWRTTEVV KIFCEDISRM NMKRTHDVLE TKTGGLVIWR SGSKILLYRG VNYQYPYFVS DRDLAHEAAS GASSMDQGVV DSREKQSIAE SSAPSITNKM
0301: VKPMLTQGVG SPDKVRFQLP GEVQLVEEAD RLLEGLGPRF TDWWAYDPLP VDGDLLPAVV PDYRRPFRLL PYGVSPKLTD DEMTTIRRLG RPLPCHFALG
0401: RNRNLQGLAV AIVKLWEKCE LAKIAVKRGV QNTNSELMAE ELKWLTGGTL ISRDKDFIVL YRGKDFLPSA VSSAIEERRR QTMIMENSSV HGNKLTENEE
0501: EIKPRAVKED IELEAKDQKD HIQTHQMKSR QRNSPEAILE KTSMKLSMAL EKKANAEKVL ADLENRESPQ LSDIDKEGIT NDEKYMLRKI GLKMKPFLLL
0601: GRRGVFDGTI ENMHLHWKYR ELVKIICNEY SIEAAHKVAE ILEAESGGIL VAVEMVSKGY AIIVYRGKNY ERPQCLRPQT LLSKREALKR SVEAQRRKSL
0701: KLHVLKLSNN IEELNRQLVE DSATNETWSD GESSNMMVEE ETENQHTEPE KAREKIELGY SSDLSVPSSG EENWEDDSEG EVDPLTTSSQ EYQEDESESA
0801: SSQRHEGNSL DSTANLSVFA ETGSANASSF HDRSLPHNSF LNANRKLPGS STGSGSQISA LRERKSENDG LVTDLSNRER LILRKQALKM KKRPPFAVGR
0901: SNVVTGLART LKMHFQKNPL AIVNVKGRAN GTSVQEVIAK LKEETGALLV SQEPSKVILY RGWGAEEEMK SFYPNNNVKS SINLPSTRSF VDDPPHVSPA
1001: LIEAIRLECG L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.