Factsheet for AT4G13070.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34540	Canola	mitochondrion	77.84	82.41
CDY49592	Canola	mitochondrion	77.55	81.85
Bra034894.1-P	Field mustard	mitochondrion	76.97	81.73
VIT_10s0092g00060.t01	Wine grape	nucleus	56.56	72.12
PGSC0003DMT400032783	Potato	mitochondrion	52.77	65.34
KRH07419	Soybean	cytosol	45.48	59.77
EES12394	Sorghum	mitochondrion	55.1	55.92
Zm00001d025706_P002	Maize	mitochondrion	54.81	55.62
KRH41679	Soybean	mitochondrion	59.48	54.99
KRH60382	Soybean	mitochondrion	58.31	53.91
Os06t0304500-01	Rice	mitochondrion	53.94	53.16
TraesCS7B01G128100.1	Wheat	mitochondrion	52.19	53.12
TraesCS7A01G219200.1	Wheat	mitochondrion	51.6	52.68
TraesCS7D01G222900.1	Wheat	mitochondrion	51.31	52.38
GSMUA_Achr9P12700_001	Banana	mitochondrion	54.52	49.87
Solyc01g105090.2.1	Tomato	plastid	53.64	49.07
AT2G28480.1	Thale cress	mitochondrion	37.03	34.14
KRH65957	Soybean	cytosol, mitochondrion, nucleus, plastid	49.56	34.07
AT3G25440.1	Thale cress	plastid	30.9	23.87
AT3G27550.2	Thale cress	mitochondrion	27.99	17.55
AT5G16180.1	Thale cress	endoplasmic reticulum	22.16	10.56
AT3G18390.1	Thale cress	plastid	23.62	9.55
AT3G23070.1	Thale cress	plastid	23.03	8.97
AT4G29750.1	Thale cress	plastid	21.28	8.68
AT4G14510.1	Thale cress	plastid	22.16	8.38
AT3G01370.1	Thale cress	plastid	23.62	8.01

Protein Annotations

Gene3D:3.30.110.60	MapMan:35.1	EntrezGene:826921	ProteinID:AEE83226.1	EMBL:AK175251	EMBL:AK176471
EMBL:AK176848	ArrayExpress:AT4G13070	EnsemblPlantsGene:AT4G13070	RefSeq:AT4G13070	TAIR:AT4G13070	RefSeq:AT4G13070-TAIR-G
EnsemblPlants:AT4G13070.1	TAIR:AT4G13070.1	Unigene:At.43316	EMBL:BT022043	EMBL:BT029203	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0008150	InterPro:IPR001890
InterPro:IPR035920	RefSeq:NP_193043.2	PFAM:PF01985	PO:PO:0000037	PO:PO:0000282	PO:PO:0000293
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616
PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009031	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020100	PO:PO:0025022	PFscan:PS51295	PANTHER:PTHR31426
PANTHER:PTHR31426:SF3	UniProt:Q67YJ7	InterPro:RNA-binding_CRM	SMART:SM01103	SUPFAM:SSF75471	UniParc:UPI000034F1F2
InterPro:YhbY_like_sf	SEG:seg	:	:	:	:

Description

At4g13070 [Source:UniProtKB/TrEMBL;Acc:Q67YJ7]

Coordinates

chr4:-:7621346..7623402

Molecular Weight (calculated)

40556.8 Da

IEP (calculated)

10.466

GRAVY (calculated)

-0.894

Length

343 amino acids

Sequence
(BLAST)

001: MLALGYAKEI AQRFLRNPKW TSRFFLLHYQ SSNYSSYVKS RPFLQVQCKS ASFDVSQAQR WNLFAYDGLF SRRYLSNSTI ELRTDDNVVR FAFNNVSSSG
101: NNVVPTRKEK KWKRAKLSRK AKVNELRFYR LKAKKKMNSP NPEVRIRYKL EKAKRKEEWL IEKLRKYDVP KSPAEPYDPE SLTEEEQHYL KRTGEKRKNF
201: VLVGRRGVFG GVVLNLHLHW KKHETVKVIC KPCNKPGQVH EYAEELARLS KGIVIDVKPN NTIVLYRGKN YVRPEVMSPV DTLSKDKALE KYRYEQSLEH
301: TSEFIEKLEK ELEEYHKYVA RHKKKKDEEA EKKKEAVSKS KVV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.