CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60382	Soybean	mitochondrion	91.91	91.91
KRH07419	Soybean	cytosol	58.49	83.14
VIT_10s0092g00060.t01	Wine grape	nucleus	55.8	76.95
PGSC0003DMT400032783	Potato	mitochondrion	51.48	68.95
CDY49592	Canola	mitochondrion	54.72	62.46
Bra034894.1-P	Field mustard	mitochondrion	54.18	62.23
CDY34540	Canola	mitochondrion	53.91	61.73
AT4G13070.1	Thale cress	mitochondrion	54.99	59.48
TraesCS7B01G128100.1	Wheat	mitochondrion	52.29	57.57
Os06t0304500-01	Rice	mitochondrion	53.91	57.47
TraesCS7D01G222900.1	Wheat	mitochondrion	51.75	57.14
EES12394	Sorghum	mitochondrion	52.02	57.1
TraesCS7A01G219200.1	Wheat	mitochondrion	51.48	56.85
Zm00001d025706_P002	Maize	mitochondrion	51.48	56.51
GSMUA_Achr9P12700_001	Banana	mitochondrion	53.1	52.53
Solyc01g105090.2.1	Tomato	plastid	52.02	51.47
KRH65957	Soybean	cytosol, mitochondrion, nucleus, plastid	57.41	42.69
KRH29618	Soybean	nucleus	29.92	39.08
KRH24621	Soybean	mitochondrion	35.85	31.15
KRH69093	Soybean	mitochondrion	31.0	25.73
KRH71856	Soybean	nucleus	30.46	21.81
KRH56532	Soybean	mitochondrion	28.57	16.23
KRG93197	Soybean	mitochondrion	28.57	16.23
KRH41639	Soybean	mitochondrion, plastid	22.91	11.69
KRH39182	Soybean	plastid	23.72	11.13
KRH48490	Soybean	nucleus	23.18	10.87
KRH02705	Soybean	plastid	22.64	10.58
KRH01727	Soybean	plastid	19.14	9.5
KRG92332	Soybean	plastid	21.29	9.46
KRH34465	Soybean	plastid	19.95	9.19
KRG93411	Soybean	plastid	22.91	8.22
KRG93409	Soybean	plastid	21.56	7.79
KRH70401	Soybean	plastid	7.82	4.94

Protein Annotations

Gene3D:3.30.110.60	MapMan:35.1	EMBL:ACUP02004777	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G043700	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920	UniProt:K7L4Y2
EnsemblPlants:KRH41679	ProteinID:KRH41679	ProteinID:KRH41679.1	PFAM:PF01985	PFscan:PS51295	PANTHER:PTHR31426
PANTHER:PTHR31426:SF3	InterPro:RNA-binding_CRM	SMART:SM01103	SUPFAM:SSF75471	UniParc:UPI0002953787	InterPro:YhbY_like_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:3437688..3443242

Molecular Weight (calculated)

43325.4 Da

IEP (calculated)

10.325

GRAVY (calculated)

-0.718

Length

371 amino acids

Sequence
(BLAST)

001: MFSAALITGT RRGFSCTFNR DSLFWLCCLV EHVPTIASSP TTTSYFWSFT PDKCIHQRTY RTPRHLSRVP SLSSRPGFLL MQRSNIFGIH DILGNWLPAR
101: YISNESVELK TDNNVVRFSL DKSDDINYGK KSQLNKRVKM SRKAKLNELR FYRLKAKKKM ISPNPEVRIT YKLEKAKRKE TWLVEKLRKF DVPKSPPETF
201: DPEILTEEER HYLKRTGEKK KHYVPVGRRG VFGGVVLNMH LHWKNHETVK VICKPCKPGQ VHEYAEELAR LSKGIVIDIK PNNTIIFYRG KNYVQPEVMS
301: PPNTLSKVKA LEKYRYEQSL EHTSQFIERL EKELEEYHQH LAKFKKGKED NAKDGLGKHD SIYAGHKMSH T

Best Arabidopsis Sequence Match ( AT4G13070.1 )
(BLAST)

001: MLALGYAKEI AQRFLRNPKW TSRFFLLHYQ SSNYSSYVKS RPFLQVQCKS ASFDVSQAQR WNLFAYDGLF SRRYLSNSTI ELRTDDNVVR FAFNNVSSSG
101: NNVVPTRKEK KWKRAKLSRK AKVNELRFYR LKAKKKMNSP NPEVRIRYKL EKAKRKEEWL IEKLRKYDVP KSPAEPYDPE SLTEEEQHYL KRTGEKRKNF
201: VLVGRRGVFG GVVLNLHLHW KKHETVKVIC KPCNKPGQVH EYAEELARLS KGIVIDVKPN NTIVLYRGKN YVRPEVMSPV DTLSKDKALE KYRYEQSLEH
301: TSEFIEKLEK ELEEYHKYVA RHKKKKDEEA EKKKEAVSKS KVV

Arabidopsis Description

At4g13070 [Source:UniProtKB/TrEMBL;Acc:Q67YJ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.