Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69093 | Soybean | mitochondrion | 79.54 | 92.17 |
| VIT_12s0035g00830.t01 | Wine grape | nucleus | 45.56 | 71.3 |
| GSMUA_Achr2P05820_001 | Banana | cytosol | 40.73 | 64.53 |
| Solyc06g082990.2.1 | Tomato | mitochondrion | 48.84 | 54.76 |
| PGSC0003DMT400071187 | Potato | mitochondrion | 48.65 | 54.31 |
| Bra015127.1-P | Field mustard | plastid | 45.37 | 54.02 |
| CDY00840 | Canola | plastid | 45.75 | 53.62 |
| CDY27892 | Canola | plastid | 44.98 | 53.44 |
| AT3G25440.1 | Thale cress | plastid | 45.17 | 52.7 |
| TraesCS2A01G366200.1 | Wheat | mitochondrion | 43.44 | 47.17 |
| TraesCS2A01G349000.1 | Wheat | mitochondrion | 43.63 | 46.89 |
| TraesCS2B01G367400.1 | Wheat | mitochondrion | 43.24 | 46.57 |
| Os04t0492900-03 | Rice | mitochondrion | 43.05 | 46.56 |
| Zm00001d003196_P001 | Maize | mitochondrion | 43.44 | 46.39 |
| KXG26557 | Sorghum | mitochondrion | 44.02 | 45.42 |
| HORVU2Hr1G084980.4 | Barley | plastid | 45.37 | 41.81 |
| TraesCS2D01G347400.2 | Wheat | mitochondrion, nucleus, plastid | 43.82 | 39.41 |
| KRH29618 | Soybean | nucleus | 19.5 | 35.56 |
| KRH07419 | Soybean | cytosol | 17.37 | 34.48 |
| KRH41679 | Soybean | mitochondrion | 21.81 | 30.46 |
| KRH60382 | Soybean | mitochondrion | 20.85 | 29.11 |
| KRH24621 | Soybean | mitochondrion | 22.59 | 27.4 |
| KRH65957 | Soybean | cytosol, mitochondrion, nucleus, plastid | 19.3 | 20.04 |
| KRH56532 | Soybean | mitochondrion | 23.55 | 18.68 |
| KRG93197 | Soybean | mitochondrion | 23.36 | 18.53 |
| KRH41639 | Soybean | mitochondrion, plastid | 15.83 | 11.28 |
| KRH39182 | Soybean | plastid | 16.8 | 11.0 |
| KRH48490 | Soybean | nucleus | 16.6 | 10.87 |
| KRG92332 | Soybean | plastid | 17.18 | 10.66 |
| KRH02705 | Soybean | plastid | 16.22 | 10.58 |
| KRH34465 | Soybean | plastid | 16.02 | 10.31 |
| KRH01727 | Soybean | plastid | 14.48 | 10.04 |
| KRG93411 | Soybean | plastid | 16.8 | 8.41 |
| KRG93409 | Soybean | plastid | 16.02 | 8.08 |
| KRH70401 | Soybean | plastid | 7.53 | 6.64 |
Protein Annotations
| EntrezGene:100790692 | Gene3D:3.30.110.60 | MapMan:35.1 | UniProt:A0A0R0KY77 | EMBL:ACUP02001091 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_02G173200 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR001890 |
| InterPro:IPR035920 | EnsemblPlants:KRH71856 | ProteinID:KRH71856 | ProteinID:KRH71856.1 | PFAM:PF01985 | PFscan:PS51295 |
| PANTHER:PTHR31426 | PANTHER:PTHR31426:SF5 | InterPro:RNA-binding_CRM | SMART:SM01103 | SUPFAM:SSF75471 | UniParc:UPI0003DEBA2F |
| InterPro:YhbY_like_sf | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:27557102..27563934
Molecular Weight (calculated)
59575.0 Da
IEP (calculated)
9.157
GRAVY (calculated)
-0.690
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGETNRKD KMSSLGTSKG ILEIAKFGVY VTAHVHFRRQ SQQPPQVHGT WFKHCGFNFI YIALVGSKSE SLIGKYGVEA FGSTPSLLIF FFFASHTPLI
101: SQQNKEPIFG HLCYMKPSPF LGNVSFHSYP FLKFNDKVVE QQHQDSQKAS SANVDGDGNA KVKRNKLKGK RAVVRWLKFF RFKKKKEYER MTAEEKNLYK
201: LLKARKKEER LCEALKKIEP AESSETTHDP EILTPEEHFF FLKMGLKSKN YVPVGRRGIY QGVILNMHLH WKKHQTLKVV VKTFSAEEVK EIAAELARLS
301: GGIVLDIHED NTIIMYRGKN YSQPPTEIMS PRVSLSRKKA LDKSKYRDAL RAVRRYIPRL EQELEILRAQ FKSSAESNTD AAEAIQNSGR ESIESGSISN
401: FQLQNSYKDR EMMNVNIGST EDETDMNSEL DSDSDKLSDI FETDSDTENF VKEEKPLYLD EFDNFPEQSD GEMNDFEEHM RQMSLKSKNM EKDDNLPKLD
501: EVDKIFLQAT SFLKKKIK
101: SQQNKEPIFG HLCYMKPSPF LGNVSFHSYP FLKFNDKVVE QQHQDSQKAS SANVDGDGNA KVKRNKLKGK RAVVRWLKFF RFKKKKEYER MTAEEKNLYK
201: LLKARKKEER LCEALKKIEP AESSETTHDP EILTPEEHFF FLKMGLKSKN YVPVGRRGIY QGVILNMHLH WKKHQTLKVV VKTFSAEEVK EIAAELARLS
301: GGIVLDIHED NTIIMYRGKN YSQPPTEIMS PRVSLSRKKA LDKSKYRDAL RAVRRYIPRL EQELEILRAQ FKSSAESNTD AAEAIQNSGR ESIESGSISN
401: FQLQNSYKDR EMMNVNIGST EDETDMNSEL DSDSDKLSDI FETDSDTENF VKEEKPLYLD EFDNFPEQSD GEMNDFEEHM RQMSLKSKNM EKDDNLPKLD
501: EVDKIFLQAT SFLKKKIK
001: METMKKLEPS ESAETTHDPE ILTPEEHFYY LKMGLKCKNY VPVGRRGIYQ GVILNMHLHW KKHQTLQVVI KTFTPDEVKE IAVELARLTG GIVLDVHEGN
101: TIIMYRGKNY VQPPTEIMSP RITLPRKKAL DKSKCRDALR AVRKYIPRLE QELQLLQAQA ETKRDYTNVK VDDNQERSEE LKKIIERSEE CLEDEQEEDE
201: AGLELATDSD LSDIFETDSE LEDAKTERPL FLEEFEKFPA INNREDEDFG DLGKAKSEGE ENDDDKSPNF DEVDKMFLRA AFLLKKKRR
101: TIIMYRGKNY VQPPTEIMSP RITLPRKKAL DKSKCRDALR AVRKYIPRLE QELQLLQAQA ETKRDYTNVK VDDNQERSEE LKKIIERSEE CLEDEQEEDE
201: AGLELATDSD LSDIFETDSE LEDAKTERPL FLEEFEKFPA INNREDEDFG DLGKAKSEGE ENDDDKSPNF DEVDKMFLRA AFLLKKKRR
Arabidopsis Description
Uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q67XL4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.