Factsheet for TraesCS2A01G366200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G349000.1	Wheat	mitochondrion	96.86	95.85
HORVU2Hr1G084980.4	Barley	plastid	91.82	77.94
Os04t0492900-03	Rice	mitochondrion	74.42	74.11
KXG26557	Sorghum	mitochondrion	74.42	70.72
Zm00001d003196_P001	Maize	mitochondrion	71.28	70.1
GSMUA_Achr2P05820_001	Banana	cytosol	45.07	65.75
VIT_12s0035g00830.t01	Wine grape	nucleus	40.88	58.91
KRH69093	Soybean	mitochondrion	47.8	51.01
PGSC0003DMT400071187	Potato	mitochondrion	48.01	49.35
CDY27892	Canola	plastid	44.86	49.08
Bra015127.1-P	Field mustard	plastid	44.65	48.97
Solyc06g082990.2.1	Tomato	mitochondrion	47.38	48.92
CDY00840	Canola	plastid	45.07	48.64
AT3G25440.1	Thale cress	plastid	43.82	47.07
KRH71856	Soybean	nucleus	47.17	43.44
TraesCS7A01G219200.1	Wheat	mitochondrion	23.48	33.33
TraesCS3A01G499000.2	Wheat	mitochondrion, nucleus	23.27	25.58
TraesCS1A01G108800.1	Wheat	mitochondrion	22.43	17.54
TraesCS1A01G376400.1	Wheat	plastid	19.5	13.03
TraesCS4A01G150500.1	Wheat	plastid	17.4	11.17
TraesCS7A01G557100.1	Wheat	cytosol, plastid	16.56	10.99
TraesCS5A01G194600.1	Wheat	plastid	18.87	9.25
TraesCS2A01G335400.1	Wheat	plastid	19.5	8.32

Protein Annotations

Gene3D:3.30.110.60	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920	PFAM:PF01985	PFscan:PS51295	PANTHER:PTHR31426
PANTHER:PTHR31426:SF5	InterPro:RNA-binding_CRM	SMART:SM01103	SUPFAM:SSF75471	EnsemblPlantsGene:TraesCS2A01G366200	EnsemblPlants:TraesCS2A01G366200.1
InterPro:YhbY_like_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:610712237..610715597

Molecular Weight (calculated)

54198.5 Da

IEP (calculated)

9.624

GRAVY (calculated)

-0.779

Length

477 amino acids

Sequence
(BLAST)

001: MAGRLLLLRQ ATRRWRLQPS PPPPPCPSSG SVDATAPSHG TMRLSAPPPP FFYQDDGFFS WPRSYNLQTC RSVHTSRPVN SQNQDTATGP QNTGAMVSVD
101: DSGKPKVKRK KLKGKRAVTR FLKSLRWKKE REFQRMTAKE KILKKLKLAQ KKEERLLAAL KKIEPNDPSE PTHDPEVLTP EEHFYFLKMG EKSKNYVPVG
201: RRGIYQGVIL NMHLHWKKHQ TLQVIVKTFT PEEVKEIASE LAVLNGGIVL SIEEGNTIIM YRGKNYAQPP PEIMSPKVAL PRKKALDKSK YRDRLRALRR
301: YIPRLEQELE YQHALMKLAG GHIGQSAAKD IAFISDSTNS VSVNKDSSSS VYKRTVSELL SESVERSEKL GDENSEVDDD STSESITYSE SEDLSDMFET
401: DSEEQAEGSK ERPLYLDRLD KFLPEKVDNE SDDFEEHLRK IASLSDKADS PAKELKISEL DEIDKIFLRA SSLLKKR

Best Arabidopsis Sequence Match ( AT3G25440.1 )
(BLAST)

001: MGFLTAAIRV STSAASMLLR RKSRQLGFLA SSSPLFSSFN SMNRTISSCN IVCKVLHKES LTRPMWNVSF LRSSSFHSTP ARETGDDDIS KSENSSSQDG
101: DSCTKLKRKK LKGKRAVVRW LKFFRWKKKK EFERMTSEEK ILNKLRKARK KEERLMETMK KLEPSESAET THDPEILTPE EHFYYLKMGL KCKNYVPVGR
201: RGIYQGVILN MHLHWKKHQT LQVVIKTFTP DEVKEIAVEL ARLTGGIVLD VHEGNTIIMY RGKNYVQPPT EIMSPRITLP RKKALDKSKC RDALRAVRKY
301: IPRLEQELQL LQAQAETKRD YTNVKVDDNQ ERSEELKKII ERSEECLEDE QEEDEAGLEL ATDSDLSDIF ETDSELEDAK TERPLFLEEF EKFPAINNRE
401: DEDFGDLGKA KSEGEENDDD KSPNFDEVDK MFLRAAFLLK KKRR

Arabidopsis Description

Uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q67XL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.