CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003196_P001	Maize	mitochondrion	87.05	90.1
Os04t0492900-03	Rice	mitochondrion	73.11	76.62
TraesCS2B01G367400.1	Wheat	mitochondrion	71.91	75.05
TraesCS2A01G349000.1	Wheat	mitochondrion	71.71	74.69
TraesCS2A01G366200.1	Wheat	mitochondrion	70.72	74.42
GSMUA_Achr2P05820_001	Banana	cytosol	45.42	69.72
HORVU2Hr1G084980.4	Barley	plastid	72.71	64.95
VIT_12s0035g00830.t01	Wine grape	nucleus	40.64	61.63
TraesCS2D01G347400.2	Wheat	mitochondrion, nucleus, plastid	68.92	60.07
PGSC0003DMT400071187	Potato	mitochondrion	48.8	52.8
CDY00840	Canola	plastid	46.41	52.71
KRH69093	Soybean	mitochondrion	46.81	52.57
Solyc06g082990.2.1	Tomato	mitochondrion	48.01	52.16
CDY27892	Canola	plastid	45.02	51.83
Bra015127.1-P	Field mustard	plastid	44.82	51.72
AT3G25440.1	Thale cress	plastid	44.02	49.77
KRH71856	Soybean	nucleus	45.42	44.02
EES12394	Sorghum	mitochondrion	23.31	34.62
EES02081	Sorghum	mitochondrion	24.9	30.86
EES17695	Sorghum	plastid	22.71	16.64
KXG22496	Sorghum	plastid	18.92	11.86
OQU83762	Sorghum	cytosol, nucleus, plastid	19.72	11.58
EES13710	Sorghum	plastid	15.34	10.58
EER96635	Sorghum	plastid	17.73	9.25
OQU81723	Sorghum	plastid	18.53	8.9

Protein Annotations

Gene3D:3.30.110.60	MapMan:35.1	EntrezGene:8073713	UniProt:A0A1B6PLL2	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001890	InterPro:IPR035920	EnsemblPlants:KXG26557
ProteinID:KXG26557	ProteinID:KXG26557.2	PFAM:PF01985	PFscan:PS51295	PANTHER:PTHR31426	PANTHER:PTHR31426:SF5
InterPro:RNA-binding_CRM	SMART:SM01103	EnsemblPlantsGene:SORBI_3006G131700	SUPFAM:SSF75471	unigene:Sbi.17671	UniParc:UPI000B8B9CE1
InterPro:YhbY_like_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:49604915..49608314

Molecular Weight (calculated)

57397.2 Da

IEP (calculated)

8.763

GRAVY (calculated)

-0.781

Length

502 amino acids

Sequence
(BLAST)

001: MASRLFLLRR HTRLWRRQEP RSRSLCPSSY GGSLASSHGT LELLAHLPNS PSYTFHKVFN RDAGFFSWLQ SCNIQAYHCI HTSRSVNSGN QATAGPQQNP
101: GVSVPVDESS ELKPKRKKLK GRRAVTRFLK SLRWKKKKEI QRMTAEEKIL YKLKLARKKE ERLVAALKKI EPEDPSEPTH DPEVLTPEEH FYFLKMGQKC
201: KNYVPVGRRG IYQGVILNMH LHWKKHQTLQ VIVKTFTPEE VKEIATELAR LSGGIVLDIQ DGNTIIMYRG KNYAQPPPEI MSPKVSLSRK KALDKSKYME
301: KLRALRRYIP RLEQELEDLH AQMKLAGEHK GQSVGKHIAS ISHDTNSVPA RKEPCSSVHS KTVSDLLSGS VEGSKRLEDE SSEVEDDSAS ESLSFSESED
401: LSDIFETESE EQEEDKKDHP LYLDRLDKFP SEKNDNEPDD FEEHLRKIAS LSDKTDSPSK ELKVSELDEI DKIFLRASSL LKKRRQICSA DASLICHAEE
501: EW

Best Arabidopsis Sequence Match ( AT3G25440.1 )
(BLAST)

001: MGFLTAAIRV STSAASMLLR RKSRQLGFLA SSSPLFSSFN SMNRTISSCN IVCKVLHKES LTRPMWNVSF LRSSSFHSTP ARETGDDDIS KSENSSSQDG
101: DSCTKLKRKK LKGKRAVVRW LKFFRWKKKK EFERMTSEEK ILNKLRKARK KEERLMETMK KLEPSESAET THDPEILTPE EHFYYLKMGL KCKNYVPVGR
201: RGIYQGVILN MHLHWKKHQT LQVVIKTFTP DEVKEIAVEL ARLTGGIVLD VHEGNTIIMY RGKNYVQPPT EIMSPRITLP RKKALDKSKC RDALRAVRKY
301: IPRLEQELQL LQAQAETKRD YTNVKVDDNQ ERSEELKKII ERSEECLEDE QEEDEAGLEL ATDSDLSDIF ETDSELEDAK TERPLFLEEF EKFPAINNRE
401: DEDFGDLGKA KSEGEENDDD KSPNFDEVDK MFLRAAFLLK KKRR

Arabidopsis Description

Uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q67XL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.