Factsheet for TraesCS2B01G367400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G349000.1	Wheat	mitochondrion	93.14	92.95
HORVU2Hr1G084980.4	Barley	plastid	90.85	77.76
Os04t0492900-03	Rice	mitochondrion	75.26	75.57
TraesCS2D01G347400.2	Wheat	mitochondrion, nucleus, plastid	87.11	72.74
Zm00001d003196_P001	Maize	mitochondrion	72.77	72.16
KXG26557	Sorghum	mitochondrion	75.05	71.91
GSMUA_Achr2P05820_001	Banana	cytosol	45.74	67.28
VIT_12s0035g00830.t01	Wine grape	nucleus	41.58	60.42
KRH69093	Soybean	mitochondrion	48.02	51.68
PGSC0003DMT400071187	Potato	mitochondrion	48.23	50.0
Solyc06g082990.2.1	Tomato	mitochondrion	47.82	49.78
CDY27892	Canola	plastid	45.11	49.77
Bra015127.1-P	Field mustard	plastid	44.91	49.66
CDY00840	Canola	plastid	45.53	49.55
AT3G25440.1	Thale cress	plastid	44.28	47.97
KRH71856	Soybean	nucleus	46.57	43.24
TraesCS7B01G128100.1	Wheat	mitochondrion	23.7	33.83
TraesCS3B01G562100.1	Wheat	mitochondrion	23.91	29.04
TraesCS1B01G108100.1	Wheat	mitochondrion	21.62	17.05
TraesCS1B01G396800.2	Wheat	plastid	19.75	11.99
TraesCS7B01G481800.1	Wheat	cytosol, plastid	16.63	10.97
TraesCS4B01G161000.1	Wheat	plastid	18.92	10.67
TraesCS5B01G190100.1	Wheat	plastid	19.33	9.56
TraesCS2B01G346500.1	Wheat	plastid	19.54	8.66

Protein Annotations

EnsemblPlants:TraesCS2B01G367400.1	EnsemblPlantsGene:TraesCS2B01G367400	Gene3D:3.30.110.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920	InterPro:RNA-binding_CRM	InterPro:YhbY_like_sf	ncoils:Coil
PANTHER:PTHR31426	PANTHER:PTHR31426:SF5	PFAM:PF01985	PFscan:PS51295	SEG:seg	SMART:SM01103
SUPFAM:SSF75471	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:523762178..523764974

Molecular Weight (calculated)

55094.5 Da

IEP (calculated)

9.365

GRAVY (calculated)

-0.811

Length

481 amino acids

Sequence
(BLAST)

001: MASRLLSLRQ ATRRWRFRPS PSPPHCPSSG SVDATALSRG TMKLSAPPPP YTFHKVFDQD DRFFSWPQSY NLQTCRPVHT SLPVDSQNQD MATGPQNTGA
101: MVSVDDSDKP KAKRKKLKGK RAVTRFLKSL RWKKEREFQR MTAEEKILKK LKLARRKEER LLAALKKIEP NDPSEPTHDP EVLTPEEHFY FLKMGQKSKN
201: YVPVGRRGIY QGVILNMHLH WKKHQTLQVI VKTFTPEEVK EIASELAILS GGIVLSIEEG NTIIMYRGKN YAQPPPEIMS PKVALPRKKA LDKSKYRDRL
301: RALRRYIPRL EQELEDQHAR MKLVEVIGQS AAKDIAFISD STNSVSVNKA SSSSVHKRTV SELLSENIER SEKLEDENSE VDDDSTSESI AYSESEDLSD
401: MFETDSEEQA EDSKERPLYL DRLDKFLPEK NDNEADDFEE HLRKIASLSD KADSPAKELK ISELDEIDKI FLRASSLLKK R

Best Arabidopsis Sequence Match ( AT3G25440.1 )
(BLAST)

001: MGFLTAAIRV STSAASMLLR RKSRQLGFLA SSSPLFSSFN SMNRTISSCN IVCKVLHKES LTRPMWNVSF LRSSSFHSTP ARETGDDDIS KSENSSSQDG
101: DSCTKLKRKK LKGKRAVVRW LKFFRWKKKK EFERMTSEEK ILNKLRKARK KEERLMETMK KLEPSESAET THDPEILTPE EHFYYLKMGL KCKNYVPVGR
201: RGIYQGVILN MHLHWKKHQT LQVVIKTFTP DEVKEIAVEL ARLTGGIVLD VHEGNTIIMY RGKNYVQPPT EIMSPRITLP RKKALDKSKC RDALRAVRKY
301: IPRLEQELQL LQAQAETKRD YTNVKVDDNQ ERSEELKKII ERSEECLEDE QEEDEAGLEL ATDSDLSDIF ETDSELEDAK TERPLFLEEF EKFPAINNRE
401: DEDFGDLGKA KSEGEENDDD KSPNFDEVDK MFLRAAFLLK KKRR

Arabidopsis Description

Uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q67XL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.