Factsheet for TraesCS5B01G190100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G197600.1	Wheat	plastid	89.52	96.35
TraesCS5A01G194600.1	Wheat	plastid	95.89	95.89
HORVU5Hr1G057460.1	Barley	nucleus, plastid	93.83	91.03
Os09t0363100-01	Rice	plastid	69.27	71.17
EER96635	Sorghum	plastid	68.35	69.13
Zm00001d020230_P006	Maize	plastid	67.42	68.05
GSMUA_Achr8P05570_001	Banana	cytosol	22.71	64.24
Bra024130.1-P	Field mustard	cytosol	34.12	51.79
CDY30199	Canola	cytosol	33.92	51.48
Bra024132.1-P	Field mustard	cytosol, plasma membrane, plastid	5.04	49.49
Solyc07g039500.2.1	Tomato	plastid	39.67	47.54
VIT_11s0016g02100.t01	Wine grape	plastid	42.86	47.17
PGSC0003DMT400056675	Potato	cytosol, plastid	39.47	46.94
KRH02705	Soybean	plastid	38.23	46.85
CDY46704	Canola	plastid	37.0	45.98
AT4G29750.1	Thale cress	plastid	37.41	43.28
TraesCS4B01G161000.1	Wheat	plastid	33.4	38.1
TraesCS1B01G396800.2	Wheat	plastid	27.34	33.59
TraesCS7B01G481800.1	Wheat	cytosol, plastid	22.82	30.45
TraesCS7B01G128100.1	Wheat	mitochondrion	8.43	24.33
TraesCS2B01G346500.1	Wheat	plastid	24.67	22.12
TraesCS2B01G367400.1	Wheat	mitochondrion	9.56	19.33
TraesCS3B01G562100.1	Wheat	mitochondrion	7.3	17.93
TraesCS1B01G108100.1	Wheat	mitochondrion	7.81	12.46

Protein Annotations

EnsemblPlants:TraesCS5B01G190100.1	EnsemblPlantsGene:TraesCS5B01G190100	Gene3D:3.30.110.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920	InterPro:RNA-binding_CRM	InterPro:YhbY_like_sf	ncoils:Coil
PANTHER:PTHR31846	PANTHER:PTHR31846:SF7	PFAM:PF01985	PFscan:PS51295	SEG:seg	SMART:SM01103
SUPFAM:SSF75471	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:344291922..344296212

Molecular Weight (calculated)

109462.0 Da

IEP (calculated)

6.879

GRAVY (calculated)

-0.729

Length

973 amino acids

Sequence
(BLAST)

001: MALLFPPPAL SPKPPFPSTL RSTRPRRTTC ISSVSSPRPP ASAPSPSTSS PYKAPALDGG TEIRKKKTKR NLKPSFEEQA LRRWSARAPS QRASFPWQRQ
101: QPQPSHREDE GAEDHEPSSA TLRSIVEYFD YDSSEDGGGD VGEGKDKGND GVAHGEAAQD RDEESRSQPT YLLGSRPVSA PWMHGQEGPT VVDRLLSGPV
201: GGDEEEAVRN GVFDDELDSE DEDEEWVDNS EVLEEEPMTV NLEEELYEDE DPAAPTTSSF PLDSILDQGS TGGGLDRSIR RSSVSSIVNT LRNSMEESAS
301: ATIGSSEGED FVQKLGSVLL PWEREEGNAV DGDKRGRHSN TKLAERTIPE PELRRLRDAA LRMKERMRIG PGGVTHAIVE SIHSKWKVDE VVKMRFEGPP
401: SLNMKRTHEI LEDRTGGTVI WRSGRSIVLY RGMNYNLRCV QSYTKIAEVD SSENAGDAIG LVPSSEERNL QKPTVEHDLQ KPIVERNSQK SSADDVKRLK
501: SIMNFSQEAT ETFDIDSFLD QLGPRYKDWS GRSPIPVDAD LLPGLVPGYK PPFRQLPYRT KISLKDKEMT ALRRLARQTA PHFALGRNRE HQGLAAAIVK
601: VWEKSSIVKI AIKRGVPNTC NDRMAEEIKK LTGGVLVSRN KEYIIFYRGN DFVTPKVRKV LVEQQQHAIT QQEQEELARL KASASITPIP KALKNPLVAG
701: TLAETREATF RWGDSLNDEL RKKENNRLIL AKHTSLLKNM KRKLILAKTK VAKAEMALAK VQEYLSPAEL PTDLETVTDE ERFLFRRIGL KMKAFLMLGR
801: REVFDGTVQN MHFHWKHREL VKIVVKGKTF EQVKHIAISL EAESGGVLIA LDKTTKGYSI IFYRGKNYKR PQVLKPRNLL TRRRAMARSI ELQRREALNH
901: HISVLRHKIW KLKSQLVQMR AAGRKQDAEL LQTVEDDLSS DDDNIQDEGD EAYLQTYGSD DEDDADDDSN EYL

Best Arabidopsis Sequence Match ( AT4G29750.1 )
(BLAST)

001: MALCQFPLNL HTISSSTSSS PRFRRLQPLD TSTKPNFLIR RLRFHSFNHP VRFHTRELSV ITATIDIDTH QRKKTKRKPK PGFFEEISDK WSSRISPKTE
101: KLPWQKQEEQ IQHHEDEEDE EGDESSSNLS SGNGLSDKRT DSNRLYSANE PWSFPRPSGY MSAPWVNNGG SKGVNFTTSS EQGIQSSSFH DVTTVDRYRR
201: DNDSSDRAVD SDLDDGERGM IDSGNNKGIW RTRKSNTVEA ERIVPEHELK RLRNVALRMV ERVKVGSAGI TQALVEAIHE KWEVDEVVKL KFSEPYSLNM
301: KRTHEVLEKK TGGLVIWRSG SSVVLYRGIS YKLKCVQTFI KQNNLEANPE IHRSVEARDY VQEDGNYPKN VPKEQLSELC ELNDLLDEVG PRFHDWTGCA
401: PFPVDADLLP GYVEGYRCPF RILPQGVKPC LSNTEMTEMR RLARTSPPHF ALGRSRELQG LAKAMVKLWA KSAIAKIAIK RGVENTRNER MAEELKRLTR
501: GVLVSRNKEY IVFYRGNDFM PPAVAEALTE RQKEITEVLQ AKEDQAREMA STRATLTSQA KSPKTQLLAG TLAETIAASS RWAPNASSVD IEELKRESAS
601: IKRAALIRDL ELRLLYGKQK LRRAERDLAK VQKDLDPSEL PTDSEIITEE ERLLYRKIGL SMDPFLLLGR REVYDGTIEN MHLHWKHREL VKVIVRGKSL
701: PQVKHIAISL EAESGGVLVS VDKTMKGYAI ILYRGKNYQM PFRLRPSNLL TRKKAFARSI ELQRREALKY HVADLEERIE LLKTGQDDDM ETRNKSDEEE
801: ENLYLRVDES DFSSDEDESL EWESEKNETF LSSEGKEEEE A

Arabidopsis Description

CRS1 / YhbY (CRM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JNR2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.