Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G190100.1 | Wheat | plastid | 71.17 | 69.27 |
| TraesCS5A01G194600.1 | Wheat | plastid | 70.86 | 68.96 |
| TraesCS5D01G197600.1 | Wheat | plastid | 64.94 | 68.03 |
| GSMUA_Achr8P05570_001 | Banana | cytosol | 24.6 | 67.73 |
| HORVU5Hr1G057460.1 | Barley | nucleus, plastid | 71.7 | 67.7 |
| EER96635 | Sorghum | plastid | 68.74 | 67.67 |
| Zm00001d020230_P006 | Maize | plastid | 68.32 | 67.12 |
| Bra024130.1-P | Field mustard | cytosol | 35.8 | 52.89 |
| CDY30199 | Canola | cytosol | 35.59 | 52.57 |
| Bra024132.1-P | Field mustard | cytosol, plasma membrane, plastid | 5.49 | 52.53 |
| KRH02705 | Soybean | plastid | 40.65 | 48.49 |
| VIT_11s0016g02100.t01 | Wine grape | plastid | 44.98 | 48.19 |
| Solyc07g039500.2.1 | Tomato | plastid | 40.44 | 47.17 |
| PGSC0003DMT400056675 | Potato | cytosol, plastid | 40.23 | 46.58 |
| CDY46704 | Canola | plastid | 38.44 | 46.49 |
| AT4G29750.1 | Thale cress | plastid | 39.28 | 44.23 |
| Os11t0592400-00 | Rice | plastid | 34.21 | 36.57 |
| Os05t0551900-00 | Rice | plastid | 28.72 | 34.78 |
| Os08t0360100-01 | Rice | plastid | 22.39 | 29.24 |
| Os04t0464800-00 | Rice | plastid | 24.92 | 27.54 |
| Os06t0304500-01 | Rice | mitochondrion | 9.4 | 25.57 |
| Os01t0958400-02 | Rice | mitochondrion | 8.87 | 20.14 |
| Os04t0492900-03 | Rice | mitochondrion | 8.98 | 17.75 |
| Os05t0145300-01 | Rice | mitochondrion | 8.34 | 14.11 |
Protein Annotations
| Gene3D:3.30.110.60 | MapMan:35.1 | EntrezGene:4346858 | ProteinID:BAD23409.1 | ProteinID:BAD33710.1 | ProteinID:BAF24904.1 |
| ProteinID:BAT07711.1 | ncoils:Coil | ProteinID:EAZ31373.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR001890 | InterPro:IPR035920 | EnsemblPlantsGene:Os09g0363100 | EnsemblPlants:Os09t0363100-01 | PFAM:PF01985 |
| PFscan:PS51295 | PANTHER:PTHR31846 | PANTHER:PTHR31846:SF7 | UniProt:Q6K4E4 | InterPro:RNA-binding_CRM | SMART:SM01103 |
| SUPFAM:SSF75471 | UniParc:UPI00003B0632 | RefSeq:XP_015612635.1 | RefSeq:XP_015612636.1 | InterPro:YhbY_like_sf | SEG:seg |
Description
Albino Leaf 2Chloroplast group IIA intron splicing factor CRS1, Splicing of chloroplast group I and II introns, Chloroplast development (Os09t0363100-01)
Coordinates
chr9:+:11880515..11885069
Molecular Weight (calculated)
105928.0 Da
IEP (calculated)
7.180
GRAVY (calculated)
-0.673
Length
947 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLFPPPPH ALSPKPPFPS TLRSTRSLRL RRATAAAAAA GAGVSSSSPS TSSPEKAPAL DVASGKRGGK KRRSLKPSFE KQAIRRWSAR APSQRASFPW
101: QQQQQQQQPG GGEGEAAGDQ ESGWSGSSTL QSIVDYFDFD YDSSDGDGDG DGDGVVVGGE AAEAQEDGPR PEPSFLLGSR PVSAPWMHGE EEPMTNQLVS
201: DEEGLDGDGA SEDEMGLVDG DGDEDEDLGS EEETLSESSD GEFSEDYAAP AANSSSMMDS VLDHVSSGGG FYRGTRRSSV NSIVNTMRNS MEESSRNAAI
301: ECPETEDFVQ KLGPVLLPWE REGDVDRPRK RSNTELAERT IPEHELRRLR DVALRMKERM RVGPGGVTQL IVESIHQKWR VEEVVKLRFE GPPSLNMKRT
401: HDILEERTGG IVIWRSGRSV VLYRGMNYNL RCVQSYTQTT EVNFDKRVSS NSVEPIHVEH KFQKSGADGL NRSAYIVNSS EKPTETFDID SFLDQLGPRY
501: KDWSGRGPIP VDADLLPGVV PGYKTPFRLL PYMVKSTLRN KEMTALRRLA RQTAPHFALG RNREHQGLAT AIVKLWEKSS IAKIAIKRGV PNTCNDRMAE
601: EIRKLTGGVL LSRNKEYIVF YRGNDFITPK VRQVLVEKQE QAITWQDEEE LARLKASASI SVKPKVFKNP PVAGTLAETR EAKSRWGDSI NAELRKKEKN
701: HMILTKHTSL LRNLKRKLIL AKTKVIKAEK ALAKVQEFLS PAELPTDLET VTDEERFLLR RIGLKMKAFL MLGRREVFDG TVQNMHLHWK HRELVKVLVK
801: GKSFPQVKHI AISLEAESGG VLISVDKTTK GYAIILYRGK NYKTPQILKP RNLLSRRKAL ARSIELQRRE GLNHHISNLR DKIWKLKSQL VRMQVAGEKP
901: DAELLQTVEA DLSKDDDKIE DEGEEAYLQT YISEDEEEPE DDQNEYL
101: QQQQQQQQPG GGEGEAAGDQ ESGWSGSSTL QSIVDYFDFD YDSSDGDGDG DGDGVVVGGE AAEAQEDGPR PEPSFLLGSR PVSAPWMHGE EEPMTNQLVS
201: DEEGLDGDGA SEDEMGLVDG DGDEDEDLGS EEETLSESSD GEFSEDYAAP AANSSSMMDS VLDHVSSGGG FYRGTRRSSV NSIVNTMRNS MEESSRNAAI
301: ECPETEDFVQ KLGPVLLPWE REGDVDRPRK RSNTELAERT IPEHELRRLR DVALRMKERM RVGPGGVTQL IVESIHQKWR VEEVVKLRFE GPPSLNMKRT
401: HDILEERTGG IVIWRSGRSV VLYRGMNYNL RCVQSYTQTT EVNFDKRVSS NSVEPIHVEH KFQKSGADGL NRSAYIVNSS EKPTETFDID SFLDQLGPRY
501: KDWSGRGPIP VDADLLPGVV PGYKTPFRLL PYMVKSTLRN KEMTALRRLA RQTAPHFALG RNREHQGLAT AIVKLWEKSS IAKIAIKRGV PNTCNDRMAE
601: EIRKLTGGVL LSRNKEYIVF YRGNDFITPK VRQVLVEKQE QAITWQDEEE LARLKASASI SVKPKVFKNP PVAGTLAETR EAKSRWGDSI NAELRKKEKN
701: HMILTKHTSL LRNLKRKLIL AKTKVIKAEK ALAKVQEFLS PAELPTDLET VTDEERFLLR RIGLKMKAFL MLGRREVFDG TVQNMHLHWK HRELVKVLVK
801: GKSFPQVKHI AISLEAESGG VLISVDKTTK GYAIILYRGK NYKTPQILKP RNLLSRRKAL ARSIELQRRE GLNHHISNLR DKIWKLKSQL VRMQVAGEKP
901: DAELLQTVEA DLSKDDDKIE DEGEEAYLQT YISEDEEEPE DDQNEYL
001: MALCQFPLNL HTISSSTSSS PRFRRLQPLD TSTKPNFLIR RLRFHSFNHP VRFHTRELSV ITATIDIDTH QRKKTKRKPK PGFFEEISDK WSSRISPKTE
101: KLPWQKQEEQ IQHHEDEEDE EGDESSSNLS SGNGLSDKRT DSNRLYSANE PWSFPRPSGY MSAPWVNNGG SKGVNFTTSS EQGIQSSSFH DVTTVDRYRR
201: DNDSSDRAVD SDLDDGERGM IDSGNNKGIW RTRKSNTVEA ERIVPEHELK RLRNVALRMV ERVKVGSAGI TQALVEAIHE KWEVDEVVKL KFSEPYSLNM
301: KRTHEVLEKK TGGLVIWRSG SSVVLYRGIS YKLKCVQTFI KQNNLEANPE IHRSVEARDY VQEDGNYPKN VPKEQLSELC ELNDLLDEVG PRFHDWTGCA
401: PFPVDADLLP GYVEGYRCPF RILPQGVKPC LSNTEMTEMR RLARTSPPHF ALGRSRELQG LAKAMVKLWA KSAIAKIAIK RGVENTRNER MAEELKRLTR
501: GVLVSRNKEY IVFYRGNDFM PPAVAEALTE RQKEITEVLQ AKEDQAREMA STRATLTSQA KSPKTQLLAG TLAETIAASS RWAPNASSVD IEELKRESAS
601: IKRAALIRDL ELRLLYGKQK LRRAERDLAK VQKDLDPSEL PTDSEIITEE ERLLYRKIGL SMDPFLLLGR REVYDGTIEN MHLHWKHREL VKVIVRGKSL
701: PQVKHIAISL EAESGGVLVS VDKTMKGYAI ILYRGKNYQM PFRLRPSNLL TRKKAFARSI ELQRREALKY HVADLEERIE LLKTGQDDDM ETRNKSDEEE
801: ENLYLRVDES DFSSDEDESL EWESEKNETF LSSEGKEEEE A
101: KLPWQKQEEQ IQHHEDEEDE EGDESSSNLS SGNGLSDKRT DSNRLYSANE PWSFPRPSGY MSAPWVNNGG SKGVNFTTSS EQGIQSSSFH DVTTVDRYRR
201: DNDSSDRAVD SDLDDGERGM IDSGNNKGIW RTRKSNTVEA ERIVPEHELK RLRNVALRMV ERVKVGSAGI TQALVEAIHE KWEVDEVVKL KFSEPYSLNM
301: KRTHEVLEKK TGGLVIWRSG SSVVLYRGIS YKLKCVQTFI KQNNLEANPE IHRSVEARDY VQEDGNYPKN VPKEQLSELC ELNDLLDEVG PRFHDWTGCA
401: PFPVDADLLP GYVEGYRCPF RILPQGVKPC LSNTEMTEMR RLARTSPPHF ALGRSRELQG LAKAMVKLWA KSAIAKIAIK RGVENTRNER MAEELKRLTR
501: GVLVSRNKEY IVFYRGNDFM PPAVAEALTE RQKEITEVLQ AKEDQAREMA STRATLTSQA KSPKTQLLAG TLAETIAASS RWAPNASSVD IEELKRESAS
601: IKRAALIRDL ELRLLYGKQK LRRAERDLAK VQKDLDPSEL PTDSEIITEE ERLLYRKIGL SMDPFLLLGR REVYDGTIEN MHLHWKHREL VKVIVRGKSL
701: PQVKHIAISL EAESGGVLVS VDKTMKGYAI ILYRGKNYQM PFRLRPSNLL TRKKAFARSI ELQRREALKY HVADLEERIE LLKTGQDDDM ETRNKSDEEE
801: ENLYLRVDES DFSSDEDESL EWESEKNETF LSSEGKEEEE A
Arabidopsis Description
CRS1 / YhbY (CRM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JNR2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.