Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G190100.1 | Wheat | plastid | 91.03 | 93.83 |
| TraesCS5A01G194600.1 | Wheat | plastid | 90.93 | 93.73 |
| TraesCS5D01G197600.1 | Wheat | plastid | 84.05 | 93.25 |
| Os09t0363100-01 | Rice | plastid | 67.7 | 71.7 |
| EER96635 | Sorghum | plastid | 66.5 | 69.33 |
| Zm00001d020230_P006 | Maize | plastid | 65.4 | 68.05 |
| GSMUA_Achr8P05570_001 | Banana | cytosol | 22.23 | 64.83 |
| Bra024130.1-P | Field mustard | cytosol | 33.4 | 52.26 |
| CDY30199 | Canola | cytosol | 33.2 | 51.95 |
| Bra024132.1-P | Field mustard | cytosol, plasma membrane, plastid | 4.89 | 49.49 |
| Solyc07g039500.2.1 | Tomato | plastid | 38.29 | 47.29 |
| VIT_11s0016g02100.t01 | Wine grape | plastid | 41.58 | 47.17 |
| PGSC0003DMT400056675 | Potato | cytosol, plastid | 38.09 | 46.7 |
| KRH02705 | Soybean | plastid | 36.69 | 46.35 |
| CDY46704 | Canola | plastid | 35.89 | 45.98 |
| AT4G29750.1 | Thale cress | plastid | 36.09 | 43.04 |
| HORVU7Hr1G052190.1 | Barley | plastid | 33.1 | 37.43 |
| HORVU1Hr1G083550.4 | Barley | plasma membrane | 26.32 | 34.06 |
| HORVU1Hr1G001270.1 | Barley | cytosol, nucleus | 3.99 | 32.79 |
| HORVU2Hr1G081140.2 | Barley | plastid | 23.83 | 21.97 |
| HORVU3Hr1G110360.1 | Barley | mitochondrion | 7.08 | 17.75 |
| HORVU2Hr1G084980.4 | Barley | plastid | 9.27 | 16.55 |
| HORVU1Hr1G019580.2 | Barley | plastid | 6.88 | 12.06 |
Protein Annotations
| Gene3D:3.30.110.60 | MapMan:35.1 | UniProt:A0A287RC99 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | EnsemblPlantsGene:HORVU5Hr1G057460 | EnsemblPlants:HORVU5Hr1G057460.1 | InterPro:IPR001890 | InterPro:IPR035920 |
| PFAM:PF01985 | PFscan:PS51295 | PANTHER:PTHR31846 | PANTHER:PTHR31846:SF7 | InterPro:RNA-binding_CRM | SMART:SM01103 |
| SUPFAM:SSF75471 | UniParc:UPI000B4650F8 | InterPro:YhbY_like_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr5H:+:450655794..450660921
Molecular Weight (calculated)
112212.0 Da
IEP (calculated)
8.107
GRAVY (calculated)
-0.708
Length
1003 amino acids
Sequence
(BLAST)
(BLAST)
0001: SKVPTISSSF RHLPSPLAPS PKLRSSPPMA LLFPPPALSP KPPFPSTLRS TRPRRATCIS GVSSPRPPAS APSPSTPSPY NAPALDGGTE ISKKKKKRNL
0101: KPSFEEQALR RWSARAPSQR ASFPWQRQQQ QPARREDEGA EDHEPSSATL RSIVEYFDYD PPSNDGDGGV GVRGDGGAAK GNDGVARGGA AQDRDEESRS
0201: QPTYLLGTRP VSAPWMHGQE GPTVVDRLLS APVGGDGGVF DDELDSEDED EEWVDNREVL EEEPMTVNLE EEMYEVDDSA APMTASSSFP LDSILDQDST
0301: DGGFDRSIRR SSVSSIVNTL RNSMEESGPN ATIGSSEGED FVQKLGSVLL PWEREEGDAF DGDKRGKHSN TKLAETTIPE PELRRLRDAA LRMKERMRVG
0401: PGGVTQAIVE SIHSKWKVEE VVKMRFEGPP SLNMKRTHEI LEDRTGGTVI WRSGRSIVLY RGMNYNLRCV QSYAKTAEVD SSENSGDAIG VVSSSEERNL
0501: QKPTVEHDLQ KPIVERNLQK SSADDVKRST SVMNFSQEAT ETFDIDSFLD QLGPRYKDWS GRSPVPVDAD LLPGLVPGYK PPFRQLPYRT KISLKDKEMT
0601: ALRRLARQTA PHFALGRNRE HQGLATAIVK VWEKSSIVKI AIKRGVPNTC NDRMAEEIKK LTGGVLVSRN KEYIIFYRGN DFVTPKVRKV LVEQQQHAIT
0701: QQDQEELARL KASASITPIP KALKNPLVAG TLAETREATS RWGDSLNDEL RKKENNRLIL AKHTSLLKNM KRKLILAKTK VAKAEMALAK VQEYLSPAEL
0801: PTDLETVTDE ERFLFRRIGL KMKAFLMLGR REVFDGTVQN MHFHWKHREL VKIVVKGKTF EQVKHIAISL EAESGGVLIA LDKTTKGYSI IFYRGKNYKR
0901: PQVLKPRNLL TRRRAMARSI ELQRREALNH HISVLRHKIW KLKSQLVQMR AAGRKQDAEL LQTVEDDLSS DDDNIQDEGD EAYLQTYGSD DEDDAEDDSN
1001: EYL
0101: KPSFEEQALR RWSARAPSQR ASFPWQRQQQ QPARREDEGA EDHEPSSATL RSIVEYFDYD PPSNDGDGGV GVRGDGGAAK GNDGVARGGA AQDRDEESRS
0201: QPTYLLGTRP VSAPWMHGQE GPTVVDRLLS APVGGDGGVF DDELDSEDED EEWVDNREVL EEEPMTVNLE EEMYEVDDSA APMTASSSFP LDSILDQDST
0301: DGGFDRSIRR SSVSSIVNTL RNSMEESGPN ATIGSSEGED FVQKLGSVLL PWEREEGDAF DGDKRGKHSN TKLAETTIPE PELRRLRDAA LRMKERMRVG
0401: PGGVTQAIVE SIHSKWKVEE VVKMRFEGPP SLNMKRTHEI LEDRTGGTVI WRSGRSIVLY RGMNYNLRCV QSYAKTAEVD SSENSGDAIG VVSSSEERNL
0501: QKPTVEHDLQ KPIVERNLQK SSADDVKRST SVMNFSQEAT ETFDIDSFLD QLGPRYKDWS GRSPVPVDAD LLPGLVPGYK PPFRQLPYRT KISLKDKEMT
0601: ALRRLARQTA PHFALGRNRE HQGLATAIVK VWEKSSIVKI AIKRGVPNTC NDRMAEEIKK LTGGVLVSRN KEYIIFYRGN DFVTPKVRKV LVEQQQHAIT
0701: QQDQEELARL KASASITPIP KALKNPLVAG TLAETREATS RWGDSLNDEL RKKENNRLIL AKHTSLLKNM KRKLILAKTK VAKAEMALAK VQEYLSPAEL
0801: PTDLETVTDE ERFLFRRIGL KMKAFLMLGR REVFDGTVQN MHFHWKHREL VKIVVKGKTF EQVKHIAISL EAESGGVLIA LDKTTKGYSI IFYRGKNYKR
0901: PQVLKPRNLL TRRRAMARSI ELQRREALNH HISVLRHKIW KLKSQLVQMR AAGRKQDAEL LQTVEDDLSS DDDNIQDEGD EAYLQTYGSD DEDDAEDDSN
1001: EYL
001: MALCQFPLNL HTISSSTSSS PRFRRLQPLD TSTKPNFLIR RLRFHSFNHP VRFHTRELSV ITATIDIDTH QRKKTKRKPK PGFFEEISDK WSSRISPKTE
101: KLPWQKQEEQ IQHHEDEEDE EGDESSSNLS SGNGLSDKRT DSNRLYSANE PWSFPRPSGY MSAPWVNNGG SKGVNFTTSS EQGIQSSSFH DVTTVDRYRR
201: DNDSSDRAVD SDLDDGERGM IDSGNNKGIW RTRKSNTVEA ERIVPEHELK RLRNVALRMV ERVKVGSAGI TQALVEAIHE KWEVDEVVKL KFSEPYSLNM
301: KRTHEVLEKK TGGLVIWRSG SSVVLYRGIS YKLKCVQTFI KQNNLEANPE IHRSVEARDY VQEDGNYPKN VPKEQLSELC ELNDLLDEVG PRFHDWTGCA
401: PFPVDADLLP GYVEGYRCPF RILPQGVKPC LSNTEMTEMR RLARTSPPHF ALGRSRELQG LAKAMVKLWA KSAIAKIAIK RGVENTRNER MAEELKRLTR
501: GVLVSRNKEY IVFYRGNDFM PPAVAEALTE RQKEITEVLQ AKEDQAREMA STRATLTSQA KSPKTQLLAG TLAETIAASS RWAPNASSVD IEELKRESAS
601: IKRAALIRDL ELRLLYGKQK LRRAERDLAK VQKDLDPSEL PTDSEIITEE ERLLYRKIGL SMDPFLLLGR REVYDGTIEN MHLHWKHREL VKVIVRGKSL
701: PQVKHIAISL EAESGGVLVS VDKTMKGYAI ILYRGKNYQM PFRLRPSNLL TRKKAFARSI ELQRREALKY HVADLEERIE LLKTGQDDDM ETRNKSDEEE
801: ENLYLRVDES DFSSDEDESL EWESEKNETF LSSEGKEEEE A
101: KLPWQKQEEQ IQHHEDEEDE EGDESSSNLS SGNGLSDKRT DSNRLYSANE PWSFPRPSGY MSAPWVNNGG SKGVNFTTSS EQGIQSSSFH DVTTVDRYRR
201: DNDSSDRAVD SDLDDGERGM IDSGNNKGIW RTRKSNTVEA ERIVPEHELK RLRNVALRMV ERVKVGSAGI TQALVEAIHE KWEVDEVVKL KFSEPYSLNM
301: KRTHEVLEKK TGGLVIWRSG SSVVLYRGIS YKLKCVQTFI KQNNLEANPE IHRSVEARDY VQEDGNYPKN VPKEQLSELC ELNDLLDEVG PRFHDWTGCA
401: PFPVDADLLP GYVEGYRCPF RILPQGVKPC LSNTEMTEMR RLARTSPPHF ALGRSRELQG LAKAMVKLWA KSAIAKIAIK RGVENTRNER MAEELKRLTR
501: GVLVSRNKEY IVFYRGNDFM PPAVAEALTE RQKEITEVLQ AKEDQAREMA STRATLTSQA KSPKTQLLAG TLAETIAASS RWAPNASSVD IEELKRESAS
601: IKRAALIRDL ELRLLYGKQK LRRAERDLAK VQKDLDPSEL PTDSEIITEE ERLLYRKIGL SMDPFLLLGR REVYDGTIEN MHLHWKHREL VKVIVRGKSL
701: PQVKHIAISL EAESGGVLVS VDKTMKGYAI ILYRGKNYQM PFRLRPSNLL TRKKAFARSI ELQRREALKY HVADLEERIE LLKTGQDDDM ETRNKSDEEE
801: ENLYLRVDES DFSSDEDESL EWESEKNETF LSSEGKEEEE A
Arabidopsis Description
CRS1 / YhbY (CRM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JNR2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.