Factsheet for HORVU1Hr1G001270.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G553500.1	Wheat	plastid	94.26	15.78
TraesCS7B01G481800.1	Wheat	cytosol, plastid	91.8	15.36
VIT_14s0006g02680.t01	Wine grape	cytosol, extracellular, mitochondrion, plastid, vacuole	49.18	14.96
TraesCS7A01G557100.1	Wheat	cytosol, plastid	87.7	14.88
Os08t0360100-01	Rice	plastid	68.03	11.45
EES13710	Sorghum	plastid	66.39	11.13
Zm00001d032373_P004	Maize	plastid	67.21	10.55
KRH70401	Soybean	plastid	41.8	8.69
GSMUA_Achr9P19190_001	Banana	plastid	53.28	8.28
KRH01727	Soybean	plastid	50.0	8.17
Solyc02g086200.1.1	Tomato	plastid	52.46	7.98
PGSC0003DMT400067878	Potato	plastid	50.82	7.73
AT5G16180.1	Thale cress	endoplasmic reticulum	42.62	7.22
HORVU1Hr1G083550.4	Barley	plasma membrane	40.98	6.45
HORVU7Hr1G052190.1	Barley	plastid	42.62	5.86
HORVU2Hr1G081140.2	Barley	plastid	45.9	5.15
CDX85512	Canola	golgi	41.8	4.65
CDY38130	Canola	golgi	40.98	4.53
Bra023555.1-P	Field mustard	golgi	40.16	4.45
HORVU5Hr1G057460.1	Barley	nucleus, plastid	32.79	3.99
HORVU3Hr1G110360.1	Barley	mitochondrion	6.56	2.0
VIT_14s0006g02670.t01	Wine grape	mitochondrion	2.46	1.59
HORVU2Hr1G084980.4	Barley	plastid	2.46	0.53
HORVU1Hr1G019580.2	Barley	plastid	1.64	0.35

Protein Annotations

EnsemblPlants:HORVU1Hr1G001270.1	EnsemblPlantsGene:HORVU1Hr1G001270	PANTHER:PTHR31846	PANTHER:PTHR31846:SF10	UniParc:UPI000B471673	UniProt:A0A287EFJ7
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:2922060..2922587

Molecular Weight (calculated)

13876.3 Da

IEP (calculated)

5.168

GRAVY (calculated)

-0.623

Length

122 amino acids

Sequence
(BLAST)

001: APQPQWKHES NAEPSTNHND DAHGVFRGID PSLAVHAYEE PVEGKLYERE VNRLLDSLGP RFVDWWWNTP LPMDADLLPE VVPGFKTPFR QCPPGVRPTL
101: ADEELTYLRK LARPLPTHFA LG

Best Arabidopsis Sequence Match ( AT5G16180.1 )
(BLAST)

001: MRNGINILSY PRFLSFCEVF VLLLCNFSDN PKLQTFTQML NSLFLSARAF PSLITNSSSR RAKSSQFDQF RENRGVSDAA IKVPTAPWMK GPLLLRPDEI
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF

Arabidopsis Description

CRS1Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF10]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.