Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70401 | Soybean | plastid | 70.42 | 89.61 |
| VIT_14s0006g02670.t01 | Wine grape | mitochondrion | 14.46 | 57.14 |
| AT5G16180.1 | Thale cress | endoplasmic reticulum | 51.67 | 53.61 |
| Solyc02g086200.1.1 | Tomato | plastid | 53.95 | 50.25 |
| PGSC0003DMT400067878 | Potato | plastid | 53.95 | 50.25 |
| HORVU1Hr1G001270.1 | Barley | cytosol, nucleus | 8.17 | 50.0 |
| TraesCS7A01G557100.1 | Wheat | cytosol, plastid | 42.3 | 43.95 |
| GSMUA_Achr9P19190_001 | Banana | plastid | 45.78 | 43.57 |
| EES13710 | Sorghum | plastid | 41.9 | 42.99 |
| TraesCS7D01G553500.1 | Wheat | plastid | 41.9 | 42.94 |
| TraesCS7B01G481800.1 | Wheat | cytosol, plastid | 41.23 | 42.25 |
| Os08t0360100-01 | Rice | plastid | 40.56 | 41.79 |
| Zm00001d032373_P004 | Maize | plastid | 42.44 | 40.8 |
| KRH41639 | Soybean | mitochondrion, plastid | 34.0 | 34.94 |
| CDX85512 | Canola | golgi | 50.47 | 34.4 |
| CDY38130 | Canola | golgi | 50.47 | 34.18 |
| Bra023555.1-P | Field mustard | golgi | 50.2 | 34.09 |
| KRH48490 | Soybean | nucleus | 34.4 | 32.49 |
| KRH39182 | Soybean | plastid | 34.14 | 32.24 |
| KRH02705 | Soybean | plastid | 31.99 | 30.1 |
| KRH34465 | Soybean | plastid | 31.46 | 29.19 |
| KRG92332 | Soybean | plastid | 32.53 | 29.1 |
| KRH07419 | Soybean | cytosol | 8.43 | 24.14 |
| KRG93409 | Soybean | plastid | 30.12 | 21.91 |
| KRG93411 | Soybean | plastid | 28.51 | 20.6 |
| KRH29618 | Soybean | nucleus | 7.5 | 19.72 |
| KRH60382 | Soybean | mitochondrion | 9.5 | 19.14 |
| KRH41679 | Soybean | mitochondrion | 9.5 | 19.14 |
| KRH69093 | Soybean | mitochondrion | 10.04 | 16.78 |
| KRH24621 | Soybean | mitochondrion | 8.84 | 15.46 |
| KRH65957 | Soybean | cytosol, mitochondrion, nucleus, plastid | 10.17 | 15.23 |
| KRH71856 | Soybean | nucleus | 10.04 | 14.48 |
| KRH56532 | Soybean | mitochondrion | 8.84 | 10.11 |
| KRG93197 | Soybean | mitochondrion | 8.84 | 10.11 |
Protein Annotations
| EntrezGene:100811938 | MapMan:16.12.2.1.1.8 | Gene3D:3.30.110.60 | EMBL:ACUP02011524 | ncoils:Coil | EnsemblPlantsGene:GLYMA_18G295000 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR001890 | InterPro:IPR035920 |
| UniProt:K7MVH3 | EnsemblPlants:KRH01727 | ProteinID:KRH01727 | ProteinID:KRH01727.1 | PFAM:PF01985 | PFscan:PS51295 |
| PANTHER:PTHR31846 | PANTHER:PTHR31846:SF10 | InterPro:RNA-binding_CRM | SMART:SM01103 | SUPFAM:SSF75471 | UniParc:UPI0002962610 |
| InterPro:YhbY_like_sf | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:57240998..57253670
Molecular Weight (calculated)
86050.5 Da
IEP (calculated)
10.187
GRAVY (calculated)
-0.558
Length
747 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFLSFHPSL FPNSYSRFHI SSSLPPNSNN GHNHQHTSPS QVPIKSPTPP WMKVPLLLQP HELVDLSNPK SKKFKPEKHE LSDKALMGKE VRGKRAMKKI
101: VDRVEKLHKT QNSNETRVDS LNVENFGGYL EILKENEEVR SKGRMPWEKD EKFGFVKVKR EKAVTAAELT LDKALLRRLR NEAARMRTWI KVKKAGVTQD
201: VVDQIKRTWR RNELAMIKFD IPLCRNMDRA REIVETKTGG LVVLSKKDFL VVYRGCNHQL TTKGSPSLRT NHYEMNRVEL ATKGDIFRVE SNHSSSEMLN
301: WNADHKDSIS TGIQDVNCQL VNGSLYERET ERLLDGLGPR FIDWWMHKPL PVDADLLPEE VPGFQPPFRL CPPHSSAKLT DYELTYFRKL AQSLPTHFVL
401: GRNKGLKGLA SAILKLWEKS LIAKIAIKYG IPNTDNEMMA NELKCLTGGV LLLRNKFYIL LYRGNDFLPR SVASLVEKRE LELKSRQLHE EVARMKAIQA
501: FSPIDEVPLD TSTSGTLTEF RKIQTKLEDT KSVNVDSNIQ LEAEICRLEK ELKEEQRRAF ILNKKIKRSE RELSKLNAAW TPSEQDTDLE IMTDEERECF
601: RKIGLKMQSS LLLGRRGIFD GVLEGLHQHW KHREVVKVIT MQKLFSQVIN TAKVLETESG GILVSVDKLK EGHAIIIYRG KNYKRPSIKL AKNLLTKREA
701: LRRSLEMQRI GSMKFFAHQR EQAISELEVK LADLQQKKEI ELREFAN
101: VDRVEKLHKT QNSNETRVDS LNVENFGGYL EILKENEEVR SKGRMPWEKD EKFGFVKVKR EKAVTAAELT LDKALLRRLR NEAARMRTWI KVKKAGVTQD
201: VVDQIKRTWR RNELAMIKFD IPLCRNMDRA REIVETKTGG LVVLSKKDFL VVYRGCNHQL TTKGSPSLRT NHYEMNRVEL ATKGDIFRVE SNHSSSEMLN
301: WNADHKDSIS TGIQDVNCQL VNGSLYERET ERLLDGLGPR FIDWWMHKPL PVDADLLPEE VPGFQPPFRL CPPHSSAKLT DYELTYFRKL AQSLPTHFVL
401: GRNKGLKGLA SAILKLWEKS LIAKIAIKYG IPNTDNEMMA NELKCLTGGV LLLRNKFYIL LYRGNDFLPR SVASLVEKRE LELKSRQLHE EVARMKAIQA
501: FSPIDEVPLD TSTSGTLTEF RKIQTKLEDT KSVNVDSNIQ LEAEICRLEK ELKEEQRRAF ILNKKIKRSE RELSKLNAAW TPSEQDTDLE IMTDEERECF
601: RKIGLKMQSS LLLGRRGIFD GVLEGLHQHW KHREVVKVIT MQKLFSQVIN TAKVLETESG GILVSVDKLK EGHAIIIYRG KNYKRPSIKL AKNLLTKREA
701: LRRSLEMQRI GSMKFFAHQR EQAISELEVK LADLQQKKEI ELREFAN
001: MRNGINILSY PRFLSFCEVF VLLLCNFSDN PKLQTFTQML NSLFLSARAF PSLITNSSSR RAKSSQFDQF RENRGVSDAA IKVPTAPWMK GPLLLRPDEI
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF
Arabidopsis Description
CRS1Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF10]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.