CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56532	Soybean	mitochondrion	92.19	92.19
CDY66660	Canola	plastid	48.09	69.47
Bra033017.1-P	Field mustard	plastid	49.31	66.81
CDY13722	Canola	mitochondrion, nucleus, plastid	50.08	65.4
CDX83707	Canola	mitochondrion, nucleus, plastid	50.23	65.08
Bra025285.1-P	Field mustard	plastid	51.76	63.65
AT3G27550.2	Thale cress	mitochondrion	52.22	62.34
PGSC0003DMT400015748	Potato	nucleus, plastid	49.0	60.04
Solyc07g047900.2.1	Tomato	mitochondrion, nucleus	50.23	57.24
GSMUA_Achr9P19780_001	Banana	nucleus	47.78	55.12
Os05t0145300-01	Rice	mitochondrion	45.64	53.21
HORVU1Hr1G019580.2	Barley	plastid	46.25	52.8
TraesCS1A01G108800.1	Wheat	mitochondrion	47.01	50.33
TraesCS1B01G108100.1	Wheat	mitochondrion	46.86	50.16
TraesCS1D01G090300.1	Wheat	mitochondrion	46.71	50.08
Zm00001d010884_P001	Maize	mitochondrion	45.79	46.36
Zm00001d024823_P001	Maize	mitochondrion	45.33	45.26
EES17695	Sorghum	plastid	46.71	44.53
CDY03983	Canola	cytosol	47.47	42.35
VIT_14s0066g00360.t01	Wine grape	nucleus	58.04	35.52
KRH29618	Soybean	nucleus	13.17	30.28
KRH41679	Soybean	mitochondrion	16.23	28.57
KRH60382	Soybean	mitochondrion	16.23	28.57
KRH07419	Soybean	cytosol	11.33	28.35
KRH69093	Soybean	mitochondrion	18.53	27.07
KRH24621	Soybean	mitochondrion	16.69	25.53
KRH71856	Soybean	nucleus	18.53	23.36
KRH65957	Soybean	cytosol, mitochondrion, nucleus, plastid	14.24	18.64
KRH41639	Soybean	mitochondrion, plastid	12.71	11.42
KRH39182	Soybean	plastid	13.32	11.0
KRH48490	Soybean	nucleus	13.32	11.0
KRG92332	Soybean	plastid	12.86	10.06
KRH34465	Soybean	plastid	12.1	9.81
KRH02705	Soybean	plastid	11.49	9.45
KRG93411	Soybean	plastid	14.7	9.28
KRH01727	Soybean	plastid	10.11	8.84
KRG93409	Soybean	plastid	13.63	8.67
KRH70401	Soybean	plastid	4.29	4.77

Protein Annotations

EntrezGene:100782246	MapMan:35.1	UniProt:A0A0R0EG62	EMBL:ACUP02011541	ncoils:Coil	EnsemblPlantsGene:GLYMA_19G003000
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920
EnsemblPlants:KRG93197	ProteinID:KRG93197	ProteinID:KRG93197.1	PFAM:PF01985	PFscan:PS51295	PANTHER:PTHR31426
PANTHER:PTHR31426:SF4	InterPro:RNA-binding_CRM	SMART:SM01103	SUPFAM:SSF75471	UniParc:UPI000233F199	InterPro:YhbY_like_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:194869..198819

Molecular Weight (calculated)

75091.4 Da

IEP (calculated)

6.910

GRAVY (calculated)

-1.091

Length

653 amino acids

Sequence
(BLAST)

001: MFGARNLQRH CFKPLSSLLQ LQSNLYKNVV PLGHTPECSN TIKVEEEYHR VGLYCFVKQL NLLNGPLSRA MSTSKGRSMR SKVERRMQKE SGKTLREIRR
101: AKKLKKKLMT EEERLIYNLK RAKKKVALLL QKLKKYELPE LPHPRHDPEL LTPEQLQAYK KIGFRNKNYV PVGVRGVFGG VVQNMHLHWK FHETVQVCCD
201: NFPKEKIKEM ASMLARLSGG IVINVHNVKT IIMFRGRNYR QPKNLIPINT LTKRKALFKA RFEQALESQK LNIKKIEQQL RRMGVNPEDP AAMASIQRVA
301: STFFNAIDQK EGSPYVFREG KQSITEPAEG FEESEPIADS DQEELDRFIA EIEDAADKEY EAEEAKEKEE FGRIRYWNKE EFGGRYRRSD ASTNDDRDVE
401: ARGSRVWQTT HPKRHAVDSD DEENTHSDND DDDEEEEWHF NNSADASDLD SNSEGSDGTR RRFKESRRKR EKQNNPGIGR ARDNESSSRH AGAKFRGNMT
501: VEDSESEGML SDVENAMWES EDEEQENNDS GYLRKLSDSY KSSSSDDEYA HQTMSNKKSG ARDHEGKVGG SAQYHDSFDA PKSVRGKKHG VNKIDSESID
601: EFSCSENWLW PSDAAEETGD YPTNQNSNNV IKSDIPKSQR RTLKEADEAW DSD

Best Arabidopsis Sequence Match ( AT3G27550.2 )
(BLAST)

001: MFVSRSLSRH CWRTCKWSLF SLLQSDSCVR NLVSSSNPVT SIGNSSEGNS NSFQPLMNQV FKGWSRGMST SRGRSMRSKV ESRMRKESGK TLREIRRAKK
101: LKKKLMTDEE RLIYNLKRAK KKVALLLQKL KKYDLPELPS PVHDPELFTS EQVQAFKKIG FKNKNYVPVG VRGVFGGVVQ NMHMHWKFHE TVQVCCDNFP
201: KEKIKEMASM IARLSGGVVI NIHNVKTIIM FRGRNYRQPK NLIPVNTLTK RKALFKARFE QALESQKLNI KKTEQQLRRM GVNPEDPVAM ASIHRVASTF
301: FNAIDKKEGT PYVFHGDKQS ERGTSVDNRE ESEPGDEDSD QEELDRFIAE IEEAADKEWE EEEAAEQEES GRIRYWNREE FAGRSRTPEL RSYGDASHGF
401: RRNDRDTHSQ RRPNDSDDDD DDGELDSEDD EIPKRFDRAR SSNTNTRRPR EDFKRRSPDP RPRPRAQVRS DDDVLSDLDN TMWDSEDEED APPANYISSS
501: DDDEDENRTV SASSSKQSRF RNNSSRDGIN NSKSKSGKQR DEDWDSD

Arabidopsis Description

RNA-binding CRS1 / YhbY (CRM) domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.