CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011945.1-P	Field mustard	mitochondrion	41.2	60.62
KRH24621	Soybean	mitochondrion	89.08	59.25
Solyc09g005270.2.1	Tomato	mitochondrion	60.56	46.99
PGSC0003DMT400030768	Potato	mitochondrion	60.56	46.74
Bra000492.1-P	Field mustard	mitochondrion	57.39	46.05
VIT_05s0102g00700.t01	Wine grape	plastid	67.25	45.91
AT2G28480.1	Thale cress	mitochondrion	59.15	45.16
CDX83289	Canola	mitochondrion	56.69	43.28
CDY31205	Canola	mitochondrion	56.69	43.28
PGSC0003DMT400039655	Potato	mitochondrion, plastid	58.8	42.17
TraesCS3D01G505800.1	Wheat	mitochondrion	56.34	40.71
TraesCS3B01G562100.1	Wheat	mitochondrion	56.69	40.66
HORVU3Hr1G110360.1	Barley	mitochondrion	56.69	40.25
EES02081	Sorghum	mitochondrion	57.04	40.0
Solyc12g014280.1.1	Tomato	mitochondrion, plastid	58.1	39.95
Zm00001d042043_P001	Maize	mitochondrion	55.28	39.85
GSMUA_Achr3P16860_001	Banana	mitochondrion	60.21	38.26
Os01t0958400-02	Rice	mitochondrion	54.93	37.41
TraesCS3A01G499000.2	Wheat	mitochondrion, nucleus	56.34	36.87
CDY15751	Canola	mitochondrion, plastid, vacuole	41.2	33.72
KRH07419	Soybean	cytosol	28.87	31.42
KRH41679	Soybean	mitochondrion	39.08	29.92
KRH60382	Soybean	mitochondrion	38.38	29.38
KRH69093	Soybean	mitochondrion	36.27	23.04
KRH71856	Soybean	nucleus	35.56	19.5
KRH65957	Soybean	cytosol, mitochondrion, nucleus, plastid	34.15	19.44
KRH56532	Soybean	mitochondrion	30.28	13.17
KRG93197	Soybean	mitochondrion	30.28	13.17
KRH41639	Soybean	mitochondrion, plastid	22.18	8.67
KRH48490	Soybean	nucleus	21.83	7.84
KRH39182	Soybean	plastid	21.83	7.84
KRH01727	Soybean	plastid	19.72	7.5
KRH02705	Soybean	plastid	20.77	7.43
KRG92332	Soybean	plastid	19.72	6.71
KRH34465	Soybean	plastid	18.31	6.46
KRG93409	Soybean	plastid	22.18	6.13
KRG93411	Soybean	plastid	20.77	5.71
KRH70401	Soybean	plastid	5.63	2.73

Protein Annotations

Gene3D:3.30.110.60	MapMan:35.1	EMBL:ACUP02006806	ncoils:Coil	EnsemblPlantsGene:GLYMA_11G127300	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920	UniProt:K7LPF4
EnsemblPlants:KRH29618	ProteinID:KRH29618	ProteinID:KRH29618.1	PFAM:PF01985	PFscan:PS51295	PANTHER:PTHR31426
PANTHER:PTHR31426:SF2	InterPro:RNA-binding_CRM	SMART:SM01103	SUPFAM:SSF75471	UniParc:UPI00029501AF	InterPro:YhbY_like_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:9667918..9671917

Molecular Weight (calculated)

32960.8 Da

IEP (calculated)

9.775

GRAVY (calculated)

-0.889

Length

284 amino acids

Sequence
(BLAST)

001: MQRKREKEKR RAANRKDPRR LGVKGKKKKQ RFASAEERIK YKIEKGPVVK PDELTGEERF YLKKMGQKRS NYLQIGRRGL FGGVVLNMHM HWKKHETVKV
101: FCKPCKPGQV HEYAQELARL SGGIPLQIIG DDTIIFYRRK NYEQPEVMSP IDTLSKKKAL EKSKFEQSLE SVRRFVAIAE KELELYCRHV ALYGDPNNRN
201: LLSMLDVPSG NSKEKGNHEV SGDFSVSLSE TEADSMEMEL SETENSLQDE NMSMNESDSE EDSMLDSYVI KKERYILLKC KMKV

Best Arabidopsis Sequence Match ( AT2G28480.1 )
(BLAST)

001: MAIAFARGLR KASSFLRSSY PLLISSRLLP ISQEFYDSTL TFVLPTRPIC RNFSHGYGTV NLVISEGKPK FETRELDPPK KYKWLTKKRL KLKRKKEREE
101: RNAANRKDPR RLTVKGKKKK FVNAEERIKY KLEKAKIKEA LLIERLKRYE VAKVQGPEVR PHEITGEERF YLKKMGQKRS NYVPIGRRGV FGGVILNMHL
201: HWKKHETVKV ICNNSKPGQV QQYAEELAKL SGGVPVNIIG DDTIIFYRGK GYVQPQVMSP IDTLSKKRAY EKSKYEQSLE SVRHFIAIAE KELELYYRHV
301: ALYDDPNNRN PLSILDDSPS ESRQHHENEF FLSCSDTDSS SEDEDEDEEL CELDNGSSSS SSAKEELSES EN

Arabidopsis Description

At2g28480 [Source:UniProtKB/TrEMBL;Acc:Q9SK10]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.