Factsheet for TraesCS3A01G499000.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

mitochondrion 4
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G562100.1	Wheat	mitochondrion	88.48	96.97
TraesCS3D01G505800.1	Wheat	mitochondrion	87.1	96.18
HORVU3Hr1G110360.1	Barley	mitochondrion	85.25	92.5
Zm00001d042043_P001	Maize	mitochondrion	70.51	77.67
EES02081	Sorghum	mitochondrion	71.43	76.54
Os01t0958400-02	Rice	mitochondrion	68.89	71.7
Bra011945.1-P	Field mustard	mitochondrion	30.65	68.91
Solyc09g005270.2.1	Tomato	mitochondrion	47.7	56.56
KRH29618	Soybean	nucleus	36.87	56.34
PGSC0003DMT400030768	Potato	mitochondrion	47.23	55.71
Bra000492.1-P	Field mustard	mitochondrion	45.39	55.65
CDY31205	Canola	mitochondrion	45.39	52.96
AT2G28480.1	Thale cress	mitochondrion	45.16	52.69
CDX83289	Canola	mitochondrion	45.16	52.69
GSMUA_Achr3P16860_001	Banana	mitochondrion	53.0	51.45
VIT_05s0102g00700.t01	Wine grape	plastid	49.08	51.2
PGSC0003DMT400039655	Potato	mitochondrion, plastid	46.08	50.51
KRH24621	Soybean	mitochondrion	48.16	48.95
Solyc12g014280.1.1	Tomato	mitochondrion, plastid	46.08	48.43
TraesCS7A01G219200.1	Wheat	mitochondrion	32.26	41.67
CDY15751	Canola	mitochondrion, plastid, vacuole	32.95	41.21
TraesCS2A01G366200.1	Wheat	mitochondrion	25.58	23.27
TraesCS2A01G349000.1	Wheat	mitochondrion	25.81	23.24
TraesCS1A01G108800.1	Wheat	mitochondrion	22.58	16.07
TraesCS1A01G376400.1	Wheat	plastid	18.2	11.06
TraesCS4A01G150500.1	Wheat	plastid	18.2	10.63
TraesCS7A01G557100.1	Wheat	cytosol, plastid	15.9	9.6
TraesCS2A01G335400.1	Wheat	plastid	19.82	7.69
TraesCS5A01G194600.1	Wheat	plastid	16.13	7.19

Protein Annotations

EnsemblPlants:TraesCS3A01G499000.2	EnsemblPlantsGene:TraesCS3A01G499000	Gene3D:3.30.110.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920	InterPro:RNA-binding_CRM	InterPro:YhbY_like_sf	ncoils:Coil
PANTHER:PTHR31426	PANTHER:PTHR31426:SF2	PFAM:PF01985	PFscan:PS51295	SEG:seg	SignalP:SignalP-noTM
SMART:SM01103	SUPFAM:SSF75471	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3A:+:724315935..724319701

Molecular Weight (calculated)

49575.6 Da

IEP (calculated)

10.048

GRAVY (calculated)

-0.715

Length

434 amino acids

Sequence
(BLAST)

001: MLLHHLLLLC HVRRQVLNFF YDALSKSNGQ LMAIRLLSRQ NLRKLAASFT LLNPSQKILL SPPPPAHSYC RSDAISPSKC LSPFYPFMYS RGVRWASYES
101: VNLVLSDDGK PKFEIEEVEP SKKGRFLTKR RLKLQRKREK RKRKEANKND PRRIRPKGKK IKQKFPTPEA RLKYKIEKSK LKEAMLVEKL KRYEVAKAEG
201: PVAKRDDLDG EERFYLKKVS QKKSNYVPIG RRGVFGGVIL NMHLHWKKHE TVKVICKPCK PGQIQEYANE IARLSGGVPI NVIGNDTIVF YRGKDYVQPE
301: VMSPIDTLSK KKALEKSKYE QSLETVRRFI AISEKELELY YRHVALYGKP QPQNADLVHG GGSQASSPEM EELNHGKDQG PHLARNAFSN VDIMDTSESD
401: EEYDSSSESD ANDVAAGDAV DSSEDTDVSD HRLF

Best Arabidopsis Sequence Match ( AT2G28480.1 )
(BLAST)

001: MAIAFARGLR KASSFLRSSY PLLISSRLLP ISQEFYDSTL TFVLPTRPIC RNFSHGYGTV NLVISEGKPK FETRELDPPK KYKWLTKKRL KLKRKKEREE
101: RNAANRKDPR RLTVKGKKKK FVNAEERIKY KLEKAKIKEA LLIERLKRYE VAKVQGPEVR PHEITGEERF YLKKMGQKRS NYVPIGRRGV FGGVILNMHL
201: HWKKHETVKV ICNNSKPGQV QQYAEELAKL SGGVPVNIIG DDTIIFYRGK GYVQPQVMSP IDTLSKKRAY EKSKYEQSLE SVRHFIAIAE KELELYYRHV
301: ALYDDPNNRN PLSILDDSPS ESRQHHENEF FLSCSDTDSS SEDEDEDEEL CELDNGSSSS SSAKEELSES EN

Arabidopsis Description

At2g28480 [Source:UniProtKB/TrEMBL;Acc:Q9SK10]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.