Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G383500.1 | Wheat | mitochondrion, plastid | 97.9 | 89.73 |
| HORVU1Hr1G083550.4 | Barley | plasma membrane | 97.34 | 89.68 |
| TraesCS1B01G396800.2 | Wheat | plastid | 96.5 | 86.99 |
| Os05t0551900-00 | Rice | plastid | 80.67 | 73.66 |
| KXG22496 | Sorghum | plastid | 81.51 | 72.66 |
| Zm00001d038922_P001 | Maize | extracellular | 79.97 | 71.82 |
| CDX95528 | Canola | cytosol | 40.9 | 61.73 |
| CDX92233 | Canola | cytosol | 8.54 | 61.62 |
| GSMUA_Achr3P26360_001 | Banana | plastid | 62.89 | 58.46 |
| VIT_17s0000g03610.t01 | Wine grape | plastid | 62.32 | 53.61 |
| Solyc03g119450.2.1 | Tomato | nucleus | 60.64 | 52.8 |
| PGSC0003DMT400014644 | Potato | plastid | 60.22 | 52.18 |
| KRH48490 | Soybean | nucleus | 57.7 | 52.09 |
| CDY18518 | Canola | plastid | 58.54 | 51.86 |
| KRH39182 | Soybean | plastid | 57.28 | 51.71 |
| CDX75965 | Canola | plastid | 60.22 | 51.19 |
| KRH41639 | Soybean | mitochondrion, plastid | 51.96 | 51.03 |
| CDY51940 | Canola | plastid | 59.94 | 51.01 |
| Bra001704.1-P | Field mustard | plastid | 59.94 | 50.95 |
| Bra037586.1-P | Field mustard | plastid | 58.12 | 50.8 |
| AT3G18390.1 | Thale cress | plastid | 59.94 | 50.47 |
| Bra022317.1-P | Field mustard | cytosol, endoplasmic reticulum | 10.22 | 48.03 |
| TraesCS4A01G150500.1 | Wheat | plastid | 38.66 | 37.15 |
| CDX95529 | Canola | plastid | 14.43 | 33.99 |
| TraesCS7A01G557100.1 | Wheat | cytosol, plastid | 33.61 | 33.38 |
| TraesCS5A01G194600.1 | Wheat | plastid | 36.41 | 26.72 |
| TraesCS7A01G219200.1 | Wheat | mitochondrion | 12.46 | 26.49 |
| TraesCS2A01G335400.1 | Wheat | plastid | 35.29 | 22.54 |
| TraesCS2A01G349000.1 | Wheat | mitochondrion | 13.31 | 19.71 |
| TraesCS2A01G366200.1 | Wheat | mitochondrion | 13.03 | 19.5 |
| TraesCS3A01G499000.2 | Wheat | mitochondrion, nucleus | 11.06 | 18.2 |
| TraesCS1A01G108800.1 | Wheat | mitochondrion | 12.32 | 14.43 |
Protein Annotations
| Gene3D:3.30.110.60 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009719 | GO:GO:0009737 | InterPro:IPR001890 | InterPro:IPR035920 |
| PFAM:PF01985 | PFscan:PS51295 | PANTHER:PTHR31846 | PANTHER:PTHR31846:SF4 | InterPro:RNA-binding_CRM | SMART:SM01103 |
| SUPFAM:SSF75471 | EnsemblPlantsGene:TraesCS1A01G376400 | EnsemblPlants:TraesCS1A01G376400.1 | InterPro:YhbY_like_sf | SEG:seg | : |
Description
No Description!
Coordinates
chr1A:-:550611654..550616190
Molecular Weight (calculated)
80676.6 Da
IEP (calculated)
5.879
GRAVY (calculated)
-0.676
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKWAPADPS APAPAPSPGH APSTSIDRIV HRLRNLGLGT DDDEPSSSPA DAPLDGRERL GDLLDRSWAR PDRQFAASGL DEAVLPWERD RESDGEEADG
101: VKRKRVRAPS LAELTMDDVE LRRLRGMGMT LKDRITVPKA GVTQAITEKI HDAWRKSELV RLKFHEDLAN DMKTAHELVE RRTGGLIIWR AGSVMVVYRG
201: SNYTRPLKSQ PLDGTSSLRK GEDSTLFIPD GSSTAESDNQ GKDLTAQHDN APILDLHNTE DMTEEELEFN QMLDELGPRF VDWWGTGILP VDADLLPQTI
301: PGYKAPFRVL PTGMRTSLTN SELTNLRKLA RNLPCHFALG RNRNHQGLAA AIVKLWEKSL VVKIAVKRGI QNTNNKLMSD EIKNLTGGTL LLRNKYYIVI
401: YRGKDFLPTS VAAALAEREE LTKDIQNLEE QRRSISIEHS PEDGFDGHAL VGTLAEFQEA QARWGRNVTS KEQQEMKEAS FRSEKEKLFR RLEHKLSIAQ
501: AKIHKAGKLL SKIEASMVLA NPSDDREMIT AEERSVFRRI GLKMKAYLPV GIRGVFDGVI ENMHLHWKHR EVVKLITKQK TLAFVEETAR LLEYESGGIL
601: VAIERVPKGH ALIFYRGKNY RRPINIRPRN LLTKAKALKR AVAMQRHEAL SQHIDQLEFN MKQMKRDLGM EDYDEEAEDA SDSESEDDTA GYDEGMEDYD
701: KEEEDESDSE DEDN
101: VKRKRVRAPS LAELTMDDVE LRRLRGMGMT LKDRITVPKA GVTQAITEKI HDAWRKSELV RLKFHEDLAN DMKTAHELVE RRTGGLIIWR AGSVMVVYRG
201: SNYTRPLKSQ PLDGTSSLRK GEDSTLFIPD GSSTAESDNQ GKDLTAQHDN APILDLHNTE DMTEEELEFN QMLDELGPRF VDWWGTGILP VDADLLPQTI
301: PGYKAPFRVL PTGMRTSLTN SELTNLRKLA RNLPCHFALG RNRNHQGLAA AIVKLWEKSL VVKIAVKRGI QNTNNKLMSD EIKNLTGGTL LLRNKYYIVI
401: YRGKDFLPTS VAAALAEREE LTKDIQNLEE QRRSISIEHS PEDGFDGHAL VGTLAEFQEA QARWGRNVTS KEQQEMKEAS FRSEKEKLFR RLEHKLSIAQ
501: AKIHKAGKLL SKIEASMVLA NPSDDREMIT AEERSVFRRI GLKMKAYLPV GIRGVFDGVI ENMHLHWKHR EVVKLITKQK TLAFVEETAR LLEYESGGIL
601: VAIERVPKGH ALIFYRGKNY RRPINIRPRN LLTKAKALKR AVAMQRHEAL SQHIDQLEFN MKQMKRDLGM EDYDEEAEDA SDSESEDDTA GYDEGMEDYD
701: KEEEDESDSE DEDN
001: MALAPLNFTE MPLRSSLPLT SSSRYCSSPS LHALLFYSLG VKPSRQQIVR PFSSLRTSER SNNRSNNNRR LDQRNHKPTP PWIDKWPPSS SGAGGDHAGK
101: KGGENNGGDR IRSAEEEAEA KLRYLEKDKG QNAIERIVLR LRNLGLGSDD EDDVEDDEGG GINGGDVKPV TGEERLGDLL KREWVRPDMM LAEGEESEEE
201: DEVLLPWEKN EEEQAAERVV GEGGVAVMQK RRARAPSLAE LTVEDSELRR LRRDGMYLRV RINIPKAGLT QAVMEKIYDT WRKEELVRLK FHEVLARDMK
301: TAHEIVERRT GGMVIWRAGS VMVVYRGLDY KGPPVISNQM AGPKETLFVP DVSSAGDEAT NAKDNQSAPL VIKDPIIKNP IRKENMTEEE VEFNSLLDSL
401: GPRFQEWWGT GVLPVDADLL PPTIPGYKTP FRLLPTGMRS NLTNAEMTNL RKIGKTLPCH FALGRNRNHQ GLAAAILQIW EKSLIAKIAV KRGIQNTNNK
501: LMADEVKTLT GGVLLLRNKY YIVIYRGKDF LPSSVAATLA ERQELTKEIQ DVEERVRNRE IEAVQPVGDK VPAEAGTLAE FYEAQARWGK EITPDHREKM
601: IEEASRVANA RVVKRIQHKL NLAQSKFQRA EKLLSKIEAS MIPNGPDYDQ EVISEEERAM FRKVGLKMKA YLPIGIRGVF DGVIENMHLH WKHRELVKLI
701: SKQKNQAFVE ETARLLEYES GGVLVAIEKV PKGFALIYYR GKNYRRPISL RPRNLLTKAK ALKRSIAMQR HEALSQHISE LERTIEQMQS QLTSKNPSYS
801: ESEWENDEDD DDDEEEEKDD VEDNESDWDE TDGESAISSI EEADMSSR
101: KGGENNGGDR IRSAEEEAEA KLRYLEKDKG QNAIERIVLR LRNLGLGSDD EDDVEDDEGG GINGGDVKPV TGEERLGDLL KREWVRPDMM LAEGEESEEE
201: DEVLLPWEKN EEEQAAERVV GEGGVAVMQK RRARAPSLAE LTVEDSELRR LRRDGMYLRV RINIPKAGLT QAVMEKIYDT WRKEELVRLK FHEVLARDMK
301: TAHEIVERRT GGMVIWRAGS VMVVYRGLDY KGPPVISNQM AGPKETLFVP DVSSAGDEAT NAKDNQSAPL VIKDPIIKNP IRKENMTEEE VEFNSLLDSL
401: GPRFQEWWGT GVLPVDADLL PPTIPGYKTP FRLLPTGMRS NLTNAEMTNL RKIGKTLPCH FALGRNRNHQ GLAAAILQIW EKSLIAKIAV KRGIQNTNNK
501: LMADEVKTLT GGVLLLRNKY YIVIYRGKDF LPSSVAATLA ERQELTKEIQ DVEERVRNRE IEAVQPVGDK VPAEAGTLAE FYEAQARWGK EITPDHREKM
601: IEEASRVANA RVVKRIQHKL NLAQSKFQRA EKLLSKIEAS MIPNGPDYDQ EVISEEERAM FRKVGLKMKA YLPIGIRGVF DGVIENMHLH WKHRELVKLI
701: SKQKNQAFVE ETARLLEYES GGVLVAIEKV PKGFALIYYR GKNYRRPISL RPRNLLTKAK ALKRSIAMQR HEALSQHISE LERTIEQMQS QLTSKNPSYS
801: ESEWENDEDD DDDEEEEKDD VEDNESDWDE TDGESAISSI EEADMSSR
Arabidopsis Description
EMB1865CRS1 / YhbY (CRM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9LS51]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.