Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022317.1-P | Field mustard | cytosol, endoplasmic reticulum | 42.42 | 27.63 |
| CDX95528 | Canola | cytosol | 68.69 | 14.38 |
| CDY31205 | Canola | mitochondrion | 37.37 | 9.95 |
| CDX83289 | Canola | mitochondrion | 36.36 | 9.68 |
| CDY70711 | Canola | nucleus | 24.24 | 9.34 |
| CDY34540 | Canola | mitochondrion | 29.29 | 8.95 |
| KRH41639 | Soybean | mitochondrion, plastid | 65.66 | 8.94 |
| CDY49592 | Canola | mitochondrion | 29.29 | 8.92 |
| CDY18518 | Canola | plastid | 69.7 | 8.56 |
| TraesCS1A01G376400.1 | Wheat | plastid | 61.62 | 8.54 |
| CDY51940 | Canola | plastid | 69.7 | 8.22 |
| KRH39182 | Soybean | plastid | 65.66 | 8.22 |
| CDX75965 | Canola | plastid | 69.7 | 8.21 |
| KRH48490 | Soybean | nucleus | 64.65 | 8.09 |
| GSMUA_Achr3P26360_001 | Banana | plastid | 61.62 | 7.94 |
| HORVU1Hr1G083550.4 | Barley | plasma membrane | 61.62 | 7.87 |
| TraesCS1D01G383500.1 | Wheat | mitochondrion, plastid | 61.62 | 7.83 |
| Solyc03g119450.2.1 | Tomato | nucleus | 64.65 | 7.8 |
| PGSC0003DMT400014644 | Potato | plastid | 64.65 | 7.77 |
| TraesCS1B01G396800.2 | Wheat | plastid | 61.62 | 7.7 |
| VIT_17s0000g03610.t01 | Wine grape | plastid | 63.64 | 7.59 |
| CDY30199 | Canola | cytosol | 47.47 | 7.33 |
| Zm00001d038922_P001 | Maize | extracellular | 58.59 | 7.3 |
| Os05t0551900-00 | Rice | plastid | 57.58 | 7.29 |
| KXG22496 | Sorghum | plastid | 58.59 | 7.24 |
| CDY66660 | Canola | plastid | 32.32 | 7.08 |
| CDY00840 | Canola | plastid | 31.31 | 7.01 |
| CDY27892 | Canola | plastid | 30.3 | 6.88 |
| CDY13722 | Canola | mitochondrion, nucleus, plastid | 32.32 | 6.4 |
| CDX83707 | Canola | mitochondrion, nucleus, plastid | 32.32 | 6.35 |
| CDY46704 | Canola | plastid | 47.47 | 6.0 |
| CDY10696 | Canola | plastid | 48.48 | 5.61 |
| CDY10350 | Canola | plastid | 48.48 | 5.54 |
| CDY16286 | Canola | plastid | 44.44 | 5.11 |
| CDY29740 | Canola | plastid | 44.44 | 5.01 |
| CDY49049 | Canola | plastid | 44.44 | 4.51 |
| CDY37526 | Canola | plastid | 44.44 | 4.49 |
| CDY03983 | Canola | cytosol | 32.32 | 4.37 |
| CDY15751 | Canola | mitochondrion, plastid, vacuole | 13.13 | 3.75 |
| CDY38130 | Canola | golgi | 41.41 | 3.72 |
| CDX85512 | Canola | golgi | 40.4 | 3.65 |
| CDX95529 | Canola | plastid | 2.02 | 0.66 |
Protein Annotations
| EnsemblPlants:CDX92233 | EnsemblPlantsGene:GSBRNA2T00153945001 | GO:A0A078DY85 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR001890 | InterPro:IPR035920 | InterPro:RNA-binding_CRM | InterPro:YhbY_like_sf | PANTHER:PTHR31846 |
| PANTHER:PTHR31846:SF4 | PFAM:PF01985 | PFscan:PS51295 | ProteinID:CDX92233 | ProteinID:CDX92233.1 | SUPFAM:SSF75471 |
| UniParc:UPI0004EE6A43 | MapMan:35.1 | : | : | : | : |
Description
BnaA05g21740D
Coordinates
chrLK031871:+:972450..973929
Molecular Weight (calculated)
11554.2 Da
IEP (calculated)
10.174
GRAVY (calculated)
-0.361
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MFQKVGLKMK SYLPLGDIRG VFDGVIENMH LHWKHRELVK LISKQKSLAF VENTARLLEY ESGGVLWKVE IPNDVMEEIV MRLPRFWGKT HGSSEKQRS
001: MALAPLNFTE MPLRSSLPLT SSSRYCSSPS LHALLFYSLG VKPSRQQIVR PFSSLRTSER SNNRSNNNRR LDQRNHKPTP PWIDKWPPSS SGAGGDHAGK
101: KGGENNGGDR IRSAEEEAEA KLRYLEKDKG QNAIERIVLR LRNLGLGSDD EDDVEDDEGG GINGGDVKPV TGEERLGDLL KREWVRPDMM LAEGEESEEE
201: DEVLLPWEKN EEEQAAERVV GEGGVAVMQK RRARAPSLAE LTVEDSELRR LRRDGMYLRV RINIPKAGLT QAVMEKIYDT WRKEELVRLK FHEVLARDMK
301: TAHEIVERRT GGMVIWRAGS VMVVYRGLDY KGPPVISNQM AGPKETLFVP DVSSAGDEAT NAKDNQSAPL VIKDPIIKNP IRKENMTEEE VEFNSLLDSL
401: GPRFQEWWGT GVLPVDADLL PPTIPGYKTP FRLLPTGMRS NLTNAEMTNL RKIGKTLPCH FALGRNRNHQ GLAAAILQIW EKSLIAKIAV KRGIQNTNNK
501: LMADEVKTLT GGVLLLRNKY YIVIYRGKDF LPSSVAATLA ERQELTKEIQ DVEERVRNRE IEAVQPVGDK VPAEAGTLAE FYEAQARWGK EITPDHREKM
601: IEEASRVANA RVVKRIQHKL NLAQSKFQRA EKLLSKIEAS MIPNGPDYDQ EVISEEERAM FRKVGLKMKA YLPIGIRGVF DGVIENMHLH WKHRELVKLI
701: SKQKNQAFVE ETARLLEYES GGVLVAIEKV PKGFALIYYR GKNYRRPISL RPRNLLTKAK ALKRSIAMQR HEALSQHISE LERTIEQMQS QLTSKNPSYS
801: ESEWENDEDD DDDEEEEKDD VEDNESDWDE TDGESAISSI EEADMSSR
101: KGGENNGGDR IRSAEEEAEA KLRYLEKDKG QNAIERIVLR LRNLGLGSDD EDDVEDDEGG GINGGDVKPV TGEERLGDLL KREWVRPDMM LAEGEESEEE
201: DEVLLPWEKN EEEQAAERVV GEGGVAVMQK RRARAPSLAE LTVEDSELRR LRRDGMYLRV RINIPKAGLT QAVMEKIYDT WRKEELVRLK FHEVLARDMK
301: TAHEIVERRT GGMVIWRAGS VMVVYRGLDY KGPPVISNQM AGPKETLFVP DVSSAGDEAT NAKDNQSAPL VIKDPIIKNP IRKENMTEEE VEFNSLLDSL
401: GPRFQEWWGT GVLPVDADLL PPTIPGYKTP FRLLPTGMRS NLTNAEMTNL RKIGKTLPCH FALGRNRNHQ GLAAAILQIW EKSLIAKIAV KRGIQNTNNK
501: LMADEVKTLT GGVLLLRNKY YIVIYRGKDF LPSSVAATLA ERQELTKEIQ DVEERVRNRE IEAVQPVGDK VPAEAGTLAE FYEAQARWGK EITPDHREKM
601: IEEASRVANA RVVKRIQHKL NLAQSKFQRA EKLLSKIEAS MIPNGPDYDQ EVISEEERAM FRKVGLKMKA YLPIGIRGVF DGVIENMHLH WKHRELVKLI
701: SKQKNQAFVE ETARLLEYES GGVLVAIEKV PKGFALIYYR GKNYRRPISL RPRNLLTKAK ALKRSIAMQR HEALSQHISE LERTIEQMQS QLTSKNPSYS
801: ESEWENDEDD DDDEEEEKDD VEDNESDWDE TDGESAISSI EEADMSSR
Arabidopsis Description
EMB1865CRS1 / YhbY (CRM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9LS51]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.