Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023555.1-P | Field mustard | golgi | 97.54 | 97.18 |
| CDY38130 | Canola | golgi | 94.8 | 94.2 |
| AT5G16180.1 | Thale cress | endoplasmic reticulum | 51.28 | 78.06 |
| VIT_14s0006g02670.t01 | Wine grape | mitochondrion | 8.76 | 50.79 |
| KRH01727 | Soybean | plastid | 34.4 | 50.47 |
| Solyc02g086200.1.1 | Tomato | plastid | 32.57 | 44.51 |
| PGSC0003DMT400067878 | Potato | plastid | 32.48 | 44.39 |
| KRH70401 | Soybean | plastid | 23.27 | 43.44 |
| HORVU1Hr1G001270.1 | Barley | cytosol, nucleus | 4.65 | 41.8 |
| TraesCS7A01G557100.1 | Wheat | cytosol, plastid | 27.1 | 41.31 |
| EES13710 | Sorghum | plastid | 26.92 | 40.52 |
| CDX92233 | Canola | cytosol | 3.65 | 40.4 |
| CDX95528 | Canola | cytosol | 17.34 | 40.17 |
| TraesCS7D01G553500.1 | Wheat | plastid | 26.64 | 40.05 |
| TraesCS7B01G481800.1 | Wheat | cytosol, plastid | 26.64 | 40.05 |
| GSMUA_Achr9P19190_001 | Banana | plastid | 28.47 | 39.75 |
| Os08t0360100-01 | Rice | plastid | 26.09 | 39.45 |
| Zm00001d032373_P004 | Maize | plastid | 27.01 | 38.1 |
| CDY30199 | Canola | cytosol | 19.25 | 32.92 |
| CDY18518 | Canola | plastid | 22.99 | 31.27 |
| CDX75965 | Canola | plastid | 23.08 | 30.12 |
| CDY51940 | Canola | plastid | 22.99 | 30.04 |
| CDY70711 | Canola | nucleus | 6.66 | 28.4 |
| CDY46704 | Canola | plastid | 20.26 | 28.35 |
| CDY10696 | Canola | plastid | 20.99 | 26.87 |
| CDY10350 | Canola | plastid | 21.17 | 26.76 |
| CDY16286 | Canola | plastid | 19.98 | 25.44 |
| CDY29740 | Canola | plastid | 20.07 | 25.06 |
| CDY37526 | Canola | plastid | 20.44 | 22.83 |
| CDY49592 | Canola | mitochondrion | 6.75 | 22.77 |
| CDY49049 | Canola | plastid | 20.26 | 22.75 |
| CDY34540 | Canola | mitochondrion | 6.66 | 22.53 |
| CDX95529 | Canola | plastid | 5.29 | 19.14 |
| CDY31205 | Canola | mitochondrion | 6.02 | 17.74 |
| CDX83289 | Canola | mitochondrion | 5.93 | 17.47 |
| CDY27892 | Canola | plastid | 6.11 | 15.37 |
| CDY00840 | Canola | plastid | 5.93 | 14.71 |
| CDY15751 | Canola | mitochondrion, plastid, vacuole | 4.65 | 14.7 |
| CDY66660 | Canola | plastid | 5.84 | 14.16 |
| CDY13722 | Canola | mitochondrion, nucleus, plastid | 5.84 | 12.8 |
| CDX83707 | Canola | mitochondrion, nucleus, plastid | 5.84 | 12.7 |
| CDY03983 | Canola | cytosol | 7.12 | 10.66 |
Protein Annotations
| MapMan:16.12.2.1.1.8 | Gene3D:3.30.110.60 | GO:A0A078D8X8 | EnsemblPlants:CDX85512 | ProteinID:CDX85512 | ProteinID:CDX85512.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00143220001 | InterPro:Glyco_trans_14 |
| InterPro:IPR001890 | InterPro:IPR035920 | PFAM:PF01985 | PFAM:PF02485 | PFscan:PS51295 | PANTHER:PTHR31846 |
| PANTHER:PTHR31846:SF10 | InterPro:RNA-binding_CRM | SMART:SM01103 | SUPFAM:SSF75471 | TMHMM:TMhelix | UniParc:UPI0004EE482A |
| InterPro:YhbY_like_sf | SEG:seg | : | : | : | : |
Description
BnaA02g03010D
Coordinates
chrLK031842:-:445909..451840
Molecular Weight (calculated)
126880.0 Da
IEP (calculated)
9.388
GRAVY (calculated)
-0.451
Length
1096 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGIIDQKIKK GEEHLMISKP LRLILFQSGR HVLRSLFFVT GFLIGVFLYL QLKAFHMSTP KTEQPLWSTV LFHHSTMMEI KQVLQTQELQ HDMSDQELFT
0101: KVSSLSSPSS SPSSSSWFGR MHNNDEKMVV KVAFMFMTGG ALPLAALWDK FFKGHEGFYS IYVHTNPSFQ DSYPETSVFY SRRIPSQPVY WGTSSMVDAE
0201: KRLLANALLD ESNQRFVLLS DSCIPLFDFT TIYDYLTGTN LSFIGSFDDP RKSGRGRYNP KMYPQINVTH WRKGSQWFST TRELALHILA DTFYYKIFDQ
0301: HCKPPCYMDE HYIPTLIHMF HGEMSANRTL TWVDWSRVGP HPGRFIWPDI TDEFLNRIRF TEECAYYSRD GENTTTSKCF LFARKFTEDT LEPLLRIYPL
0401: VLGSEHSKVQ TLLMLTPLFV SVRPLPSLTT ISSLNPNQNP PHTSKAPNFN QFNENPKLPD NAIKVPTAPW MKGPIFLPPD ELINTSHHHK STRKQNAEEK
0501: TFKALNRRES GVRGSKAMKK IVRSVEKLDD SEGEFKSLEE AETRRRRRMP WEREEEKFIL RRRKKERVLT TADLILDEGL LKRLRLEASK MREWVNVRKA
0601: GVTETVVNDI RLIWEENELA MVRFDVPLCR NMERAQEILE LKTGGLVVLS KKEFLVVYRG PLSDSSVCVK EGGDDISSSL YEREGERLLN GLGPRYVDWW
0701: MRRPFPVDAD LLPEVVDGYR TPSRRCPPNT RAKLSDKELT YLRNIAQALP FHFVLGRNHG LQGLASAILK LWEKCVIAKI AIKWGALNTN NEEMADELKN
0801: LTGGVLILRN KYLIILFRGK DFLSDEVADL VDDRERLLRR YQHFEETRRE SDIEISEVVA DGEQLEETSK TGTLLEFQEL QRKFGDMEVR NLETEAEKAK
0901: LEKELKSQEH KLCILKSKIE KTTIELLKLN SLRKPSERDD DIEILTNEER ECLRRIGLKM NSSLVLGRRG VFDGVMEGLH QHWKHREVAK VITMQKLFSR
1001: VVYTAKSLEA ESNGVLISIE KLKEGHAILM YRGRNYKRPS SKLMAQNLLT KRKALQRSVL MQRLGSLKFF AYQRERAIED LKLSLVKLQG SASELC
0101: KVSSLSSPSS SPSSSSWFGR MHNNDEKMVV KVAFMFMTGG ALPLAALWDK FFKGHEGFYS IYVHTNPSFQ DSYPETSVFY SRRIPSQPVY WGTSSMVDAE
0201: KRLLANALLD ESNQRFVLLS DSCIPLFDFT TIYDYLTGTN LSFIGSFDDP RKSGRGRYNP KMYPQINVTH WRKGSQWFST TRELALHILA DTFYYKIFDQ
0301: HCKPPCYMDE HYIPTLIHMF HGEMSANRTL TWVDWSRVGP HPGRFIWPDI TDEFLNRIRF TEECAYYSRD GENTTTSKCF LFARKFTEDT LEPLLRIYPL
0401: VLGSEHSKVQ TLLMLTPLFV SVRPLPSLTT ISSLNPNQNP PHTSKAPNFN QFNENPKLPD NAIKVPTAPW MKGPIFLPPD ELINTSHHHK STRKQNAEEK
0501: TFKALNRRES GVRGSKAMKK IVRSVEKLDD SEGEFKSLEE AETRRRRRMP WEREEEKFIL RRRKKERVLT TADLILDEGL LKRLRLEASK MREWVNVRKA
0601: GVTETVVNDI RLIWEENELA MVRFDVPLCR NMERAQEILE LKTGGLVVLS KKEFLVVYRG PLSDSSVCVK EGGDDISSSL YEREGERLLN GLGPRYVDWW
0701: MRRPFPVDAD LLPEVVDGYR TPSRRCPPNT RAKLSDKELT YLRNIAQALP FHFVLGRNHG LQGLASAILK LWEKCVIAKI AIKWGALNTN NEEMADELKN
0801: LTGGVLILRN KYLIILFRGK DFLSDEVADL VDDRERLLRR YQHFEETRRE SDIEISEVVA DGEQLEETSK TGTLLEFQEL QRKFGDMEVR NLETEAEKAK
0901: LEKELKSQEH KLCILKSKIE KTTIELLKLN SLRKPSERDD DIEILTNEER ECLRRIGLKM NSSLVLGRRG VFDGVMEGLH QHWKHREVAK VITMQKLFSR
1001: VVYTAKSLEA ESNGVLISIE KLKEGHAILM YRGRNYKRPS SKLMAQNLLT KRKALQRSVL MQRLGSLKFF AYQRERAIED LKLSLVKLQG SASELC
001: MRNGINILSY PRFLSFCEVF VLLLCNFSDN PKLQTFTQML NSLFLSARAF PSLITNSSSR RAKSSQFDQF RENRGVSDAA IKVPTAPWMK GPLLLRPDEI
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF
Arabidopsis Description
CRS1Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF10]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.