Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13710 | Sorghum | plastid | 85.33 | 91.07 |
| TraesCS7A01G557100.1 | Wheat | cytosol, plastid | 65.38 | 70.65 |
| TraesCS7D01G553500.1 | Wheat | plastid | 65.12 | 69.41 |
| Os08t0360100-01 | Rice | plastid | 64.48 | 69.1 |
| TraesCS7B01G481800.1 | Wheat | cytosol, plastid | 64.61 | 68.86 |
| HORVU1Hr1G001270.1 | Barley | cytosol, nucleus | 10.55 | 67.21 |
| VIT_14s0006g02680.t01 | Wine grape | cytosol, extracellular, mitochondrion, plastid, vacuole | 25.23 | 48.88 |
| GSMUA_Achr9P19190_001 | Banana | plastid | 46.85 | 46.37 |
| VIT_14s0006g02670.t01 | Wine grape | mitochondrion | 10.42 | 42.86 |
| KRH01727 | Soybean | plastid | 40.8 | 42.44 |
| AT5G16180.1 | Thale cress | endoplasmic reticulum | 38.48 | 41.53 |
| PGSC0003DMT400067878 | Potato | plastid | 40.67 | 39.4 |
| Solyc02g086200.1.1 | Tomato | plastid | 40.28 | 39.03 |
| KRH70401 | Soybean | plastid | 28.44 | 37.65 |
| Zm00001d038922_P001 | Maize | extracellular | 32.56 | 31.82 |
| Zm00001d007572_P001 | Maize | plastid | 30.37 | 28.03 |
| CDX85512 | Canola | golgi | 38.1 | 27.01 |
| Bra023555.1-P | Field mustard | golgi | 37.84 | 26.73 |
| CDY38130 | Canola | golgi | 37.32 | 26.29 |
| Zm00001d020230_P006 | Maize | plastid | 28.44 | 22.93 |
| Zm00001d025629_P007 | Maize | plastid | 29.09 | 21.75 |
| Zm00001d025633_P007 | Maize | plastid | 29.09 | 21.75 |
| Zm00001d025706_P002 | Maize | mitochondrion | 9.4 | 21.6 |
| Zm00001d042043_P001 | Maize | mitochondrion | 9.01 | 17.77 |
| Zm00001d003196_P001 | Maize | mitochondrion | 10.04 | 16.08 |
| Zm00001d010884_P001 | Maize | mitochondrion | 7.59 | 9.15 |
| Zm00001d024823_P001 | Maize | mitochondrion | 7.59 | 9.02 |
Protein Annotations
| MapMan:16.12.2.1.1.8 | Gene3D:3.30.110.60 | UniProt:A0A1D6KQA2 | ncoils:Coil | GO:GO:0000373 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | InterPro:IPR001890 | InterPro:IPR035920 | ProteinID:ONM04953.1 | PFAM:PF01985 | PFscan:PS51295 |
| PANTHER:PTHR31846 | PANTHER:PTHR31846:SF10 | InterPro:RNA-binding_CRM | SMART:SM01103 | SUPFAM:SSF75471 | UniParc:UPI000843DBAE |
| InterPro:YhbY_like_sf | EnsemblPlantsGene:Zm00001d032373 | EnsemblPlants:Zm00001d032373_P004 | EnsemblPlants:Zm00001d032373_T004 | SEG:seg | : |
Description
chloroplast RNA splicing1 chloroplast RNA splicing1
Coordinates
chr1:-:224244775..224257054
Molecular Weight (calculated)
87900.8 Da
IEP (calculated)
10.214
GRAVY (calculated)
-0.538
Length
777 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPPLPLFS PSLKAPPPPP WLHGSSTQSR DSAPPVPPLP AEATPSKFRI DSPKPAPARK NTKTAAKPLT AGVPGGRTHR AVLGIIRRVR SLELSDAPSP
101: NSVHTSNSGA AAAAFHLTIE LSPPREPGQY VVEKEKSRAV PWAAARDEGL KVALRREKKP REPTRAETEL ETHELHRLRR LARGIGRWAR AKKAGVTDEV
201: VKEVRREWAS GEELAAVRIV EPLRRSMDRA REILEIKTGG LVVWTKGDMH FVYRGSKYQQ NAKHSHTFLT NVHKGYLVKH NVHTTLLKYG SIGPVLINNY
301: GEADDAFQEN DQSICGQKDE EPVKGTLYER EVNRLLDTLG PRFVDWWWDT PLPVDADLLP EFVPGFKTPY RLCPPGVRPT LADEELTYLR KLARLLPTHF
401: ALGRNTRLQG LAAAILKLWE KSLIAKIAVK IGIQNTNNEQ MAWNLKASTI PDEVPSDIYV FNSSVQHLTG GTVILRNKDF IILYRGKDFL PGGVAQTVIQ
501: REAQVHDEQV KEEEARLKAV DSLQMVGELS EESSLGTFRE YQGFHAKFVH ENTENSNTMI ELEAEKYRLE KELKDHEWKL SVLNKKIERS NQALAKLHSS
601: WSPSEQSADR EHLTEEEKIM FRRIGRKMDG LVLLGRRGIF DGVIEEIHQH WKHKEVVKVI TKQNQTRQIM YAASLLEVET GGILIAVEKL TTSHAIILYR
701: GKNYRRPAKS SFSNLLTKRE ALRRSIEVQR RGSMKYFVRE RQKSILELKR KLVEVCDKAN QVSNPMIMKS LDSMVSK
101: NSVHTSNSGA AAAAFHLTIE LSPPREPGQY VVEKEKSRAV PWAAARDEGL KVALRREKKP REPTRAETEL ETHELHRLRR LARGIGRWAR AKKAGVTDEV
201: VKEVRREWAS GEELAAVRIV EPLRRSMDRA REILEIKTGG LVVWTKGDMH FVYRGSKYQQ NAKHSHTFLT NVHKGYLVKH NVHTTLLKYG SIGPVLINNY
301: GEADDAFQEN DQSICGQKDE EPVKGTLYER EVNRLLDTLG PRFVDWWWDT PLPVDADLLP EFVPGFKTPY RLCPPGVRPT LADEELTYLR KLARLLPTHF
401: ALGRNTRLQG LAAAILKLWE KSLIAKIAVK IGIQNTNNEQ MAWNLKASTI PDEVPSDIYV FNSSVQHLTG GTVILRNKDF IILYRGKDFL PGGVAQTVIQ
501: REAQVHDEQV KEEEARLKAV DSLQMVGELS EESSLGTFRE YQGFHAKFVH ENTENSNTMI ELEAEKYRLE KELKDHEWKL SVLNKKIERS NQALAKLHSS
601: WSPSEQSADR EHLTEEEKIM FRRIGRKMDG LVLLGRRGIF DGVIEEIHQH WKHKEVVKVI TKQNQTRQIM YAASLLEVET GGILIAVEKL TTSHAIILYR
701: GKNYRRPAKS SFSNLLTKRE ALRRSIEVQR RGSMKYFVRE RQKSILELKR KLVEVCDKAN QVSNPMIMKS LDSMVSK
001: MRNGINILSY PRFLSFCEVF VLLLCNFSDN PKLQTFTQML NSLFLSARAF PSLITNSSSR RAKSSQFDQF RENRGVSDAA IKVPTAPWMK GPLLLRPDEI
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF
Arabidopsis Description
CRS1Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF10]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.