Factsheet for TraesCS7A01G557100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G481800.1	Wheat	cytosol, plastid	92.21	90.95
HORVU1Hr1G001270.1	Barley	cytosol, nucleus	14.88	87.7
EES13710	Sorghum	plastid	70.93	70.05
Os08t0360100-01	Rice	plastid	66.62	66.07
Zm00001d032373_P004	Maize	plastid	70.65	65.38
VIT_14s0006g02680.t01	Wine grape	cytosol, extracellular, mitochondrion, plastid, vacuole	26.84	48.13
GSMUA_Achr9P19190_001	Banana	plastid	48.96	44.84
KRH01727	Soybean	plastid	43.95	42.3
AT5G16180.1	Thale cress	endoplasmic reticulum	41.45	41.39
VIT_14s0006g02670.t01	Wine grape	mitochondrion	10.85	41.27
PGSC0003DMT400067878	Potato	plastid	42.98	38.53
Solyc02g086200.1.1	Tomato	plastid	42.7	38.28
KRH70401	Soybean	plastid	30.74	37.65
TraesCS1A01G376400.1	Wheat	plastid	33.38	33.61
TraesCS4A01G150500.1	Wheat	plastid	32.68	31.63
CDX85512	Canola	golgi	41.31	27.1
Bra023555.1-P	Field mustard	golgi	41.31	27.0
CDY38130	Canola	golgi	40.61	26.47
TraesCS5A01G194600.1	Wheat	plastid	31.02	22.92
TraesCS7A01G219200.1	Wheat	mitochondrion	10.15	21.73
TraesCS2A01G335400.1	Wheat	plastid	31.15	20.04
TraesCS2A01G349000.1	Wheat	mitochondrion	11.13	16.6
TraesCS2A01G366200.1	Wheat	mitochondrion	10.99	16.56
TraesCS3A01G499000.2	Wheat	mitochondrion, nucleus	9.6	15.9
TraesCS1A01G108800.1	Wheat	mitochondrion	8.34	9.84

Protein Annotations

MapMan:16.12.2.1.1.8	Gene3D:3.30.110.60	ncoils:Coil	GO:GO:0000373	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
InterPro:IPR001890	InterPro:IPR035920	PFAM:PF01985	PFscan:PS51295	PANTHER:PTHR31846	PANTHER:PTHR31846:SF10
InterPro:RNA-binding_CRM	SMART:SM01103	SUPFAM:SSF75471	EnsemblPlantsGene:TraesCS7A01G557100	EnsemblPlants:TraesCS7A01G557100.1	InterPro:YhbY_like_sf
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:729261904..729265706

Molecular Weight (calculated)

81551.9 Da

IEP (calculated)

10.110

GRAVY (calculated)

-0.630

Length

719 amino acids

Sequence
(BLAST)

001: MAPPPLPLFS PSPKQPPPPP WLHGPKAPAT VTPPHPSEAP SSSKPQRQRE TSSTPNPLSA GVPGGRTRRA VLGIIRRVRS LELSDPPSPR PRPSTRGAVP
101: LFHLPVEEDR GGEAGGDEKG RPVPWSAARE EGLKAALRRQ KKAREPTPAE QLLDPAELER LRRAARGVAD GWVRAKKAGV TDEVVEDVRR VWSGGQELAA
201: VRVVEPLRRC MDRAREILEI KSGGLVVWTK GDIHFVYRGS NYQENTKHRH KSIADIQRVS PEKCTVPEPQ WKHESNTEPS TNYSGDVHGI FREIDPSIAV
301: HAYEEPVKGT LYEREVNRLL DSLGPRFVDW WWNTPLPVDA DLLPEVVPGF KTPFRQCPPG VRPTLADDEL TYLRNLARPL PTHFALGRNT RLQGLAAAVL
401: KLWEKSLIAK IAVKVGIQNT NNEQMAWNLK HLTGGTIILR NKDFIILYRG KDFLPRGVKQ CVIKQEARVD AQQVKEEEAR LTVIDSLQMF TGLPSEGTSA
501: GTFREYLDFQ LNHVQETTEN NLGMVELEAE KHRLEKELKD LQRRLSILMK KIERSNEALA KLHSSWNPSE QSADKELLTE EERMVFRKIG LKMDEHVLLG
601: RRGIFDGVIE EIHQHWKHKE IVKVITKQNQ AYQITYTSML LEVETGGMLI ATQKLTNSHA IILYRGKNYH RPTKSSPSNL LTKREALRRS VEVQRRGSMK
701: YYVWERQKSI EDLQWRLVS

Best Arabidopsis Sequence Match ( AT5G16180.1 )
(BLAST)

001: MRNGINILSY PRFLSFCEVF VLLLCNFSDN PKLQTFTQML NSLFLSARAF PSLITNSSSR RAKSSQFDQF RENRGVSDAA IKVPTAPWMK GPLLLRPDEI
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF

Arabidopsis Description

CRS1Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF10]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.