Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole, mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 2
- extracellular 1
- vacuole 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G001270.1 | Barley | cytosol, nucleus | 14.96 | 49.18 |
| PGSC0003DMT400067878 | Potato | plastid | 56.61 | 28.3 |
| Solyc02g086200.1.1 | Tomato | plastid | 56.11 | 28.05 |
| EES13710 | Sorghum | plastid | 48.88 | 26.92 |
| TraesCS7A01G557100.1 | Wheat | cytosol, plastid | 48.13 | 26.84 |
| TraesCS7D01G553500.1 | Wheat | plastid | 48.63 | 26.75 |
| Os08t0360100-01 | Rice | plastid | 48.13 | 26.62 |
| TraesCS7B01G481800.1 | Wheat | cytosol, plastid | 47.38 | 26.06 |
| GSMUA_Achr9P19190_001 | Banana | plastid | 49.63 | 25.35 |
| Zm00001d032373_P004 | Maize | plastid | 48.88 | 25.23 |
| VIT_17s0000g03610.t01 | Wine grape | plastid | 39.15 | 18.92 |
| VIT_05s0020g04770.t01 | Wine grape | plastid | 35.91 | 15.96 |
| VIT_11s0016g02100.t01 | Wine grape | plastid | 34.41 | 15.61 |
| VIT_14s0066g01910.t01 | Wine grape | cytosol | 36.41 | 13.98 |
| VIT_10s0092g00060.t01 | Wine grape | nucleus | 9.23 | 13.75 |
| VIT_14s0006g02670.t01 | Wine grape | mitochondrion | 3.74 | 7.94 |
| VIT_05s0102g00700.t01 | Wine grape | plastid | 7.73 | 7.45 |
| VIT_12s0035g00830.t01 | Wine grape | nucleus | 5.99 | 7.25 |
| VIT_14s0066g00360.t01 | Wine grape | nucleus | 6.48 | 2.44 |
Protein Annotations
| MapMan:35.1 | ProteinID:CCB57704 | ProteinID:CCB57704.1 | ncoils:Coil | UniProt:F6HSR3 | EMBL:FN596245 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR001890 | InterPro:IPR035920 |
| PFAM:PF01985 | PFscan:PS51295 | PANTHER:PTHR31846 | PANTHER:PTHR31846:SF10 | InterPro:RNA-binding_CRM | SMART:SM01103 |
| SUPFAM:SSF75471 | UniParc:UPI00021085C0 | ArrayExpress:VIT_14s0006g02680 | EnsemblPlantsGene:VIT_14s0006g02680 | EnsemblPlants:VIT_14s0006g02680.t01 | InterPro:YhbY_like_sf |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr14:-:20660296..20668364
Molecular Weight (calculated)
46186.2 Da
IEP (calculated)
8.843
GRAVY (calculated)
-0.339
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLPWSNSTC LCAGIWIERG RFLRSRPEAW LFGVRKTLLL FIGDPIISQL QNIFKRCDSS PTGIFMEEMV DSQPVNGSLY EREADRLLDG LGPRFIDWWR
101: PKPLPVDADL LPEVLPGFRP PFRLSPPQTR SKLTDDELTY LRKLAYALPT HFVLGRNRKL QGLAAAILKL WEKSLIVKIA IKWGIPNTKN EQMANELKCL
201: TGGVLLLRNK FFIILYRGKD FLPCRVANLI VEREMEFKGC QIREEDARLK AIETSFVTDK PLANTSTTGT LSEFQNIETE FRGLKDGNTE IEVELEAEKE
301: RLEKELKKQE RNLFILKRKI ERSAKVLAKL NSAWRPADHD ADKEMITEEE RECFRKIGQK MDSSLLLGKE KVHFPNRSVS LLQTFVLDIQ TFEVTGLADF
401: K
101: PKPLPVDADL LPEVLPGFRP PFRLSPPQTR SKLTDDELTY LRKLAYALPT HFVLGRNRKL QGLAAAILKL WEKSLIVKIA IKWGIPNTKN EQMANELKCL
201: TGGVLLLRNK FFIILYRGKD FLPCRVANLI VEREMEFKGC QIREEDARLK AIETSFVTDK PLANTSTTGT LSEFQNIETE FRGLKDGNTE IEVELEAEKE
301: RLEKELKKQE RNLFILKRKI ERSAKVLAKL NSAWRPADHD ADKEMITEEE RECFRKIGQK MDSSLLLGKE KVHFPNRSVS LLQTFVLDIQ TFEVTGLADF
401: K
001: MRNGINILSY PRFLSFCEVF VLLLCNFSDN PKLQTFTQML NSLFLSARAF PSLITNSSSR RAKSSQFDQF RENRGVSDAA IKVPTAPWMK GPLLLRPDEI
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF
Arabidopsis Description
CRS1Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF10]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.