Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G001270.1 | Barley | cytosol, nucleus | 8.28 | 53.28 |
| VIT_14s0006g02680.t01 | Wine grape | cytosol, extracellular, mitochondrion, plastid, vacuole | 25.35 | 49.63 |
| EES13710 | Sorghum | plastid | 45.99 | 49.59 |
| TraesCS7A01G557100.1 | Wheat | cytosol, plastid | 44.84 | 48.96 |
| Os08t0360100-01 | Rice | plastid | 44.97 | 48.69 |
| TraesCS7B01G481800.1 | Wheat | cytosol, plastid | 44.97 | 48.42 |
| TraesCS7D01G553500.1 | Wheat | plastid | 44.97 | 48.42 |
| Zm00001d032373_P004 | Maize | plastid | 46.37 | 46.85 |
| KRH01727 | Soybean | plastid | 43.57 | 45.78 |
| AT5G16180.1 | Thale cress | endoplasmic reticulum | 40.64 | 44.31 |
| Solyc02g086200.1.1 | Tomato | plastid | 43.18 | 42.27 |
| PGSC0003DMT400067878 | Potato | plastid | 43.06 | 42.14 |
| VIT_14s0006g02670.t01 | Wine grape | mitochondrion | 10.06 | 41.8 |
| KRH70401 | Soybean | plastid | 30.06 | 40.2 |
| GSMUA_Achr3P26360_001 | Banana | plastid | 31.85 | 32.55 |
| GSMUA_Achr8P05570_001 | Banana | cytosol | 14.01 | 31.98 |
| CDX85512 | Canola | golgi | 39.75 | 28.47 |
| Bra023555.1-P | Field mustard | golgi | 39.36 | 28.09 |
| CDY38130 | Canola | golgi | 39.24 | 27.92 |
| GSMUA_Achr3P29330_001 | Banana | cytosol, nucleus, plastid | 29.43 | 27.21 |
| GSMUA_Achr10P... | Banana | plastid | 30.32 | 23.82 |
| GSMUA_Achr8P05580_001 | Banana | plasma membrane | 17.07 | 22.98 |
| GSMUA_Achr9P12700_001 | Banana | mitochondrion | 9.43 | 19.73 |
| GSMUA_Achr2P05820_001 | Banana | cytosol | 7.52 | 18.04 |
| GSMUA_Achr3P16860_001 | Banana | mitochondrion | 9.04 | 15.88 |
| GSMUA_Achr9P19780_001 | Banana | nucleus | 8.03 | 11.13 |
Protein Annotations
| Gene3D:3.30.110.60 | MapMan:35.1 | ncoils:Coil | GO:GO:0000373 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr9G19190_001 | EnsemblPlants:GSMUA_Achr9P19190_001 | EnsemblPlants:GSMUA_Achr9T19190_001 | InterPro:IPR001890 | InterPro:IPR035920 | UniProt:M0U1M6 |
| PFAM:PF01985 | PFscan:PS51295 | PANTHER:PTHR31846 | PANTHER:PTHR31846:SF10 | InterPro:RNA-binding_CRM | SMART:SM01103 |
| SUPFAM:SSF75471 | UniParc:UPI0002965468 | InterPro:YhbY_like_sf | SEG:seg | : | : |
Description
Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr9G19190_001]
Coordinates
chr9:-:18137729..18146915
Molecular Weight (calculated)
90575.7 Da
IEP (calculated)
10.446
GRAVY (calculated)
-0.360
Length
785 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTAPWMTSP FLLPSDQVLD LSNPSRSTRN KKKVPGPADR PLTDKVRGGR SRHAMLGIIR NIKNLRQVHS AEPDEETPAA AFADAGQAAE FGVPLRPAKG
101: GRGQRAPWVT AEEKLVFGRE KKVKVVTSAE SVLAPELLFR LRGEARRMTR WVKAKKAGVT QGVMEEIRRG WKENELVMVR IVEPLRRNMD RAREIVETGG
201: LVVWCKRDFL VVYRGQKYEM FRNAPIQIME SGIQMGDISI EGSLYEREAD RLLDGLGPRF VDWWWQKPLP VDADLLPEVV PGFRPPLRMC PPGVRPKLTD
301: DELMYLRKLA RPLPTHFALG RNRKLQGLAA SIRKLWEKSL IAKIAVKVGI QNTNNEQMSL ELKASILIVL MVDCNFHYLF LINTTWKNPN AYTGIRWLSN
401: QKKIFHCLKQ VKKTCISETF GLFNNENSGF SCVCLRNFLH NTLQLDTSVY YMLKSSKSSR TLFSVYHFSS RKWLFWNLIA FFFFPHKVQH ALDIVRLTGG
501: VLILRNKFFI ILYRGKDFLP GGVTNLIDER EAELNEQQLE EEKARTGFTN SLRAMDNILP SFSIVGTYME FQEIQANHIS LNNLSYRGQI RIEAEREKLK
601: KELREHEHKL FILKQKIERS EELLSKLSLS CCPSEQTADL EILTEEERQA FRKVGLEMNE IILLGRRGIY DGVFGSIHQH WKHREVVKVL TKQKAFHHIT
701: CTARLLEVES GGILVAVEKL RTSHAIIIYR GKNYARPLKP SNNLLSKREA LQRSIEIQRR GSLKYFARQR EKLIWELTQR LRKLE
101: GRGQRAPWVT AEEKLVFGRE KKVKVVTSAE SVLAPELLFR LRGEARRMTR WVKAKKAGVT QGVMEEIRRG WKENELVMVR IVEPLRRNMD RAREIVETGG
201: LVVWCKRDFL VVYRGQKYEM FRNAPIQIME SGIQMGDISI EGSLYEREAD RLLDGLGPRF VDWWWQKPLP VDADLLPEVV PGFRPPLRMC PPGVRPKLTD
301: DELMYLRKLA RPLPTHFALG RNRKLQGLAA SIRKLWEKSL IAKIAVKVGI QNTNNEQMSL ELKASILIVL MVDCNFHYLF LINTTWKNPN AYTGIRWLSN
401: QKKIFHCLKQ VKKTCISETF GLFNNENSGF SCVCLRNFLH NTLQLDTSVY YMLKSSKSSR TLFSVYHFSS RKWLFWNLIA FFFFPHKVQH ALDIVRLTGG
501: VLILRNKFFI ILYRGKDFLP GGVTNLIDER EAELNEQQLE EEKARTGFTN SLRAMDNILP SFSIVGTYME FQEIQANHIS LNNLSYRGQI RIEAEREKLK
601: KELREHEHKL FILKQKIERS EELLSKLSLS CCPSEQTADL EILTEEERQA FRKVGLEMNE IILLGRRGIY DGVFGSIHQH WKHREVVKVL TKQKAFHHIT
701: CTARLLEVES GGILVAVEKL RTSHAIIIYR GKNYARPLKP SNNLLSKREA LQRSIEIQRR GSLKYFARQR EKLIWELTQR LRKLE
001: MRNGINILSY PRFLSFCEVF VLLLCNFSDN PKLQTFTQML NSLFLSARAF PSLITNSSSR RAKSSQFDQF RENRGVSDAA IKVPTAPWMK GPLLLRPDEI
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF
Arabidopsis Description
CRS1Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF10]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.