CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01727	Soybean	plastid	89.61	70.42
HORVU1Hr1G001270.1	Barley	cytosol, nucleus	8.69	41.8
AT5G16180.1	Thale cress	endoplasmic reticulum	45.32	36.94
PGSC0003DMT400067878	Potato	plastid	48.21	35.29
Solyc02g086200.1.1	Tomato	plastid	47.7	34.91
TraesCS7A01G557100.1	Wheat	cytosol, plastid	37.65	30.74
GSMUA_Achr9P19190_001	Banana	plastid	40.2	30.06
TraesCS7D01G553500.1	Wheat	plastid	37.14	29.9
EES13710	Sorghum	plastid	36.8	29.67
Os08t0360100-01	Rice	plastid	36.29	29.38
TraesCS7B01G481800.1	Wheat	cytosol, plastid	36.29	29.22
Zm00001d032373_P004	Maize	plastid	37.65	28.44
KRH41639	Soybean	mitochondrion, plastid	29.13	23.52
KRH48490	Soybean	nucleus	31.69	23.51
CDY38130	Canola	golgi	44.12	23.48
Bra023555.1-P	Field mustard	golgi	43.95	23.45
CDX85512	Canola	golgi	43.44	23.27
KRH39182	Soybean	plastid	31.18	23.14
KRH02705	Soybean	plastid	28.79	21.28
KRG92332	Soybean	plastid	28.96	20.36
KRH34465	Soybean	plastid	27.77	20.25
KRG93409	Soybean	plastid	26.75	15.29
KRG93411	Soybean	plastid	25.21	14.31
KRH07419	Soybean	cytosol	5.45	12.26
KRH69093	Soybean	mitochondrion	6.81	8.95
KRH41679	Soybean	mitochondrion	4.94	7.82
KRH60382	Soybean	mitochondrion	4.94	7.82
KRH71856	Soybean	nucleus	6.64	7.53
KRH65957	Soybean	cytosol, mitochondrion, nucleus, plastid	5.62	6.61
KRH24621	Soybean	mitochondrion	4.43	6.09
KRH29618	Soybean	nucleus	2.73	5.63
VIT_14s0006g02670.t01	Wine grape	mitochondrion	1.7	5.29
KRH56532	Soybean	mitochondrion	4.77	4.29
KRG93197	Soybean	mitochondrion	4.77	4.29

Protein Annotations

MapMan:35.1	UniProt:A0A0R0KUF6	EMBL:ACUP02000770	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G088500	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920	EnsemblPlants:KRH70401
ProteinID:KRH70401	ProteinID:KRH70401.1	PFAM:PF01985	PFscan:PS51295	PANTHER:PTHR31846	PANTHER:PTHR31846:SF10
InterPro:RNA-binding_CRM	SMART:SM01103	SUPFAM:SSF75471	UniParc:UPI0006EE1A41	InterPro:YhbY_like_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:7782734..7786619

Molecular Weight (calculated)

67583.3 Da

IEP (calculated)

10.303

GRAVY (calculated)

-0.516

Length

587 amino acids

Sequence
(BLAST)

001: MLFLSFHPSL STNSYSYSRF HISSSLPPNS NNGHNHQHTS TSPSDVPIKA PIPPWMKKGP LLLQPHELFH LSNPKSKKFK PEKHELSDKA LMGKEVRGKR
101: AMKKIVERVE KLHKTQNSYE TRVGSLNVEN FGGYLKNLKE NDEVLLRKLR NEAERMRTWI KVKKARVTQD VVDQIKRTWR RNELAMTKFD IPLCRNMDRA
201: REIVEVLTKT GGLVVLSKKD FLVVYRGCNH QLTTKGSPSL RTNRFEMNRV ELATKGDICW VVSNNSSSKM LSWNADHKDS ISTGIQDVNC QLVNGSLLLD
301: GLRPRFIDWW MHKPLPVDAD LLPVEVPRFQ PPFRLCPPHS SAKQTAYELT YFRKLAQPLP THFVLGRNKG LKGLAAAILK LWEKSLIAKI AIKYGIPNID
401: NEMMATELKC LTGGVLLLRN KFYILLYRGN DFLPRRVASL VEKRELELKS CQHHEEVARM KAIQAFSPIG EVTQDTSTSG TLTKFRKIQT KLEETKNVNK
501: DLNIQLEAEI CRVERELKEE QRRAFILNKK IERSERELSK LNAAWTPSEQ DIDLEIMTDE ERECFRKIGL KMKSSLLLGK EIPLLQF

Best Arabidopsis Sequence Match ( AT5G16180.1 )
(BLAST)

001: MRNGINILSY PRFLSFCEVF VLLLCNFSDN PKLQTFTQML NSLFLSARAF PSLITNSSSR RAKSSQFDQF RENRGVSDAA IKVPTAPWMK GPLLLRPDEI
101: LDTKKRNKPR KVEEKTFKAL NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM PWEREEERFI LRRMKKESVP
201: TTAELILDEG LLNRLRREAS KMRKWVNVRK AGVTELVVNK IKSMWKLNEL AMVRFDVPLC RNMERAQEII EMKTGGLVVL SKKEFLVVYR GGPSYSSEGQ
301: DEISSSLYER EADRLLDGLG PRYMDWWMRR PFPVDADLLP EVVNGYMTPS RRCPPNTRAK LTDEELTYLR NIAQPLPFHF VLGRNYGLQG LASAIVKLWE
401: KCIIAKIAIK WGALNTNNEE MADELRYLTG GVLILRNKYL IVLYRGKDFL SDEVADLVED RERLLSRYQH FEETKRESDI ELLEVVTNGK QLKETNKSGT
501: LLEFQELQRK FGEMDPRNLE TEAEKARLEK ELKSQEHKLS ILKSKIEKSN MELFKLNSLW KPSEGDDDIE ILTNEERECL RRIGLKMNSS LVLGRRGVFF
601: GVMEGLHQHW KHREVAKVIT MQKLFSRVVY TAKALETESN GVLISIEKLK EGHAILIYRG KNYKRPSSKL MAQNLLTKRK ALQRSVVMQR LGSLKFFAYQ
701: RERAIEDLKV SLVNLQDSAF

Arabidopsis Description

CRS1Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF10]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.