CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0092g00060.t01	Wine grape	nucleus	63.22	61.34
KRH41679	Soybean	mitochondrion	83.14	58.49
KRH60382	Soybean	mitochondrion	81.23	57.14
PGSC0003DMT400032783	Potato	mitochondrion	60.15	56.68
CDY49592	Canola	mitochondrion	57.85	46.46
CDY34540	Canola	mitochondrion	57.47	46.3
Bra034894.1-P	Field mustard	mitochondrion	57.09	46.13
EES12394	Sorghum	mitochondrion	59.0	45.56
AT4G13070.1	Thale cress	mitochondrion	59.77	45.48
Zm00001d025706_P002	Maize	mitochondrion	57.85	44.67
TraesCS7B01G128100.1	Wheat	mitochondrion	56.7	43.92
TraesCS7D01G222900.1	Wheat	mitochondrion	55.94	43.45
TraesCS7A01G219200.1	Wheat	mitochondrion	55.94	43.45
Os06t0304500-01	Rice	mitochondrion	57.47	43.1
Solyc01g105090.2.1	Tomato	plastid	60.15	41.87
GSMUA_Achr9P12700_001	Banana	mitochondrion	57.09	39.73
KRH65957	Soybean	cytosol, mitochondrion, nucleus, plastid	65.9	34.47
KRH29618	Soybean	nucleus	31.42	28.87
KRH24621	Soybean	mitochondrion	38.31	23.42
KRH69093	Soybean	mitochondrion	34.87	20.36
KRH71856	Soybean	nucleus	34.48	17.37
KRH56532	Soybean	mitochondrion	28.74	11.49
KRG93197	Soybean	mitochondrion	28.35	11.33
KRH02705	Soybean	plastid	27.97	9.19
KRH41639	Soybean	mitochondrion, plastid	24.9	8.94
KRH39182	Soybean	plastid	26.82	8.85
KRH48490	Soybean	nucleus	26.05	8.6
KRH01727	Soybean	plastid	24.14	8.43
KRG92332	Soybean	plastid	21.84	6.83
KRH34465	Soybean	plastid	20.31	6.58
KRG93411	Soybean	plastid	24.52	6.19
KRG93409	Soybean	plastid	22.99	5.84
KRH70401	Soybean	plastid	12.26	5.45

Protein Annotations

MapMan:35.1	UniProt:A0A0R0FXP5	EMBL:ACUP02009988	ncoils:Coil	EnsemblPlantsGene:GLYMA_16G087500	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920	EnsemblPlants:KRH07419
ProteinID:KRH07419	ProteinID:KRH07419.1	PFAM:PF01985	PFscan:PS51295	PANTHER:PTHR31426	PANTHER:PTHR31426:SF3
InterPro:RNA-binding_CRM	SMART:SM01103	SUPFAM:SSF75471	UniParc:UPI0006EE137A	InterPro:YhbY_like_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr16:+:11033011..11036711

Molecular Weight (calculated)

30892.6 Da

IEP (calculated)

10.436

GRAVY (calculated)

-0.816

Length

261 amino acids

Sequence
(BLAST)

001: MQRSNIFGSH DILGSWLHAK YISNDSIKLK TNNNLVQFSL DKFDDIDYGK KSQLNKKVKM SRKAKLNELR FYHLKAKKKM ISPNPEVRIR YKLKRLDIIT
101: TAKRKETWLI EKLRKFDVPK SFPKTFDHEI LTEEERHYLK RIGEKKKHYV PVGRQGMFSG VVLNMHLHWK NHETVKVVCK HCKPGQQGIM IDIKPNNTFI
201: FYRGKNYVQS EVMSLPNTLS KAEALEHTSY FIERLEKELE EYHQHLAKFK KGKEDTGKDT T

Best Arabidopsis Sequence Match ( AT4G13070.1 )
(BLAST)

001: MLALGYAKEI AQRFLRNPKW TSRFFLLHYQ SSNYSSYVKS RPFLQVQCKS ASFDVSQAQR WNLFAYDGLF SRRYLSNSTI ELRTDDNVVR FAFNNVSSSG
101: NNVVPTRKEK KWKRAKLSRK AKVNELRFYR LKAKKKMNSP NPEVRIRYKL EKAKRKEEWL IEKLRKYDVP KSPAEPYDPE SLTEEEQHYL KRTGEKRKNF
201: VLVGRRGVFG GVVLNLHLHW KKHETVKVIC KPCNKPGQVH EYAEELARLS KGIVIDVKPN NTIVLYRGKN YVRPEVMSPV DTLSKDKALE KYRYEQSLEH
301: TSEFIEKLEK ELEEYHKYVA RHKKKKDEEA EKKKEAVSKS KVV

Arabidopsis Description

At4g13070 [Source:UniProtKB/TrEMBL;Acc:Q67YJ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.