CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
extracellular 1
golgi 2
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus, plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71856	Soybean	nucleus	92.17	79.54
VIT_12s0035g00830.t01	Wine grape	nucleus	52.8	71.3
GSMUA_Achr2P05820_001	Banana	cytosol	46.98	64.22
Solyc06g082990.2.1	Tomato	mitochondrion	57.05	55.19
PGSC0003DMT400071187	Potato	mitochondrion	57.05	54.96
Bra015127.1-P	Field mustard	plastid	52.8	54.25
CDY00840	Canola	plastid	53.47	54.07
CDY27892	Canola	plastid	52.35	53.67
AT3G25440.1	Thale cress	plastid	52.13	52.48
TraesCS2B01G367400.1	Wheat	mitochondrion	51.68	48.02
TraesCS2A01G366200.1	Wheat	mitochondrion	51.01	47.8
TraesCS2A01G349000.1	Wheat	mitochondrion	51.45	47.72
Zm00001d003196_P001	Maize	mitochondrion	51.45	47.42
Os04t0492900-03	Rice	mitochondrion	50.78	47.39
KXG26557	Sorghum	mitochondrion	52.57	46.81
HORVU2Hr1G084980.4	Barley	plastid	52.57	41.81
TraesCS2D01G347400.2	Wheat	mitochondrion, nucleus, plastid	51.01	39.58
KRH29618	Soybean	nucleus	23.04	36.27
KRH07419	Soybean	cytosol	20.36	34.87
KRH41679	Soybean	mitochondrion	25.73	31.0
KRH60382	Soybean	mitochondrion	24.61	29.65
KRH24621	Soybean	mitochondrion	27.29	28.57
KRH65957	Soybean	cytosol, mitochondrion, nucleus, plastid	22.6	20.24
KRH56532	Soybean	mitochondrion	27.29	18.68
KRG93197	Soybean	mitochondrion	27.07	18.53
KRH41639	Soybean	mitochondrion, plastid	18.79	11.55
KRG92332	Soybean	plastid	21.25	11.38
KRH34465	Soybean	plastid	19.91	11.06
KRH39182	Soybean	plastid	19.46	11.0
KRH48490	Soybean	nucleus	19.24	10.87
KRH02705	Soybean	plastid	19.02	10.71
KRH01727	Soybean	plastid	16.78	10.04
KRG93411	Soybean	plastid	19.69	8.51
KRG93409	Soybean	plastid	18.79	8.18
KRH70401	Soybean	plastid	8.95	6.81

Protein Annotations

EntrezGene:100775770	Gene3D:3.30.110.60	MapMan:35.1	EMBL:ACUP02000688	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G003500
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920
UniProt:K7K5R7	EnsemblPlants:KRH69093	ProteinID:KRH69093	ProteinID:KRH69093.1	PFAM:PF01985	PFscan:PS51295
PANTHER:PTHR31426	PANTHER:PTHR31426:SF5	InterPro:RNA-binding_CRM	SMART:SM01103	SUPFAM:SSF75471	SignalP:SignalP-noTM
UniParc:UPI0002952A89	InterPro:YhbY_like_sf	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:400682..404706

Molecular Weight (calculated)

51655.8 Da

IEP (calculated)

8.749

GRAVY (calculated)

-0.704

Length

447 amino acids

Sequence
(BLAST)

001: MVWKLLGARL LSSYSSSLLL TPLLFRSKIS LVRGQEPIFG HLCYMKPSPF LGNASFHSCP FLKFNDKVVE QQQDSQKASS ANVDGDGNAK VKRNKLKGKR
101: AVVRWLKFFR FKKKKEYERM TAEEKILYKL LKARKKEERL CEALKKIEPA ESSETTHDPE ILTPEEHFFF LKMGLKSKNY VPVGRRGIYQ GVILNMHLHW
201: KKHQTLKVVV KTFSAEEVKE IATELARLSG GIVLDIHEDN TIIMYRGKNY SQPPTEIMSP RVSLSRKKAL DKSKYRDALR AVRRHIPRLE QELEILRAQF
301: KSSAESNTDA AEAIQNSGIE SIESGSISNF QLQNSYKDRE RMNDNIGCTE DETDMNSELD SDSDKLSDIF ETDSDTENFI KEEKPLYLDE FDNFPEQSDG
401: EMNDFEEHLR QMSLKSKNME KEDNLPKLDE VDKIFLQATS FLKKKIK

Best Arabidopsis Sequence Match ( AT3G25440.1 )
(BLAST)

001: MGFLTAAIRV STSAASMLLR RKSRQLGFLA SSSPLFSSFN SMNRTISSCN IVCKVLHKES LTRPMWNVSF LRSSSFHSTP ARETGDDDIS KSENSSSQDG
101: DSCTKLKRKK LKGKRAVVRW LKFFRWKKKK EFERMTSEEK ILNKLRKARK KEERLMETMK KLEPSESAET THDPEILTPE EHFYYLKMGL KCKNYVPVGR
201: RGIYQGVILN MHLHWKKHQT LQVVIKTFTP DEVKEIAVEL ARLTGGIVLD VHEGNTIIMY RGKNYVQPPT EIMSPRITLP RKKALDKSKC RDALRAVRKY
301: IPRLEQELQL LQAQAETKRD YTNVKVDDNQ ERSEELKKII ERSEECLEDE QEEDEAGLEL ATDSDLSDIF ETDSELEDAK TERPLFLEEF EKFPAINNRE
401: DEDFGDLGKA KSEGEENDDD KSPNFDEVDK MFLRAAFLLK KKRR

Arabidopsis Description

Uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q67XL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.