CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48490	Soybean	nucleus	95.2	95.2
CDX95528	Canola	cytosol	40.46	67.65
CDX92233	Canola	cytosol	8.22	65.66
KRH41639	Soybean	mitochondrion, plastid	58.41	63.55
VIT_17s0000g03610.t01	Wine grape	plastid	63.72	60.72
GSMUA_Achr3P26360_001	Banana	plastid	56.89	58.59
CDY18518	Canola	plastid	59.17	58.06
Solyc03g119450.2.1	Tomato	nucleus	60.05	57.93
TraesCS1A01G376400.1	Wheat	plastid	51.71	57.28
PGSC0003DMT400014644	Potato	plastid	59.67	57.28
Bra037586.1-P	Field mustard	plastid	59.04	57.16
CDX75965	Canola	plastid	60.05	56.55
CDY51940	Canola	plastid	59.92	56.5
Bra001704.1-P	Field mustard	plastid	59.92	56.43
Os05t0551900-00	Rice	plastid	55.5	56.14
AT3G18390.1	Thale cress	plastid	59.54	55.54
Zm00001d038922_P001	Maize	extracellular	54.61	54.34
HORVU1Hr1G083550.4	Barley	plasma membrane	53.1	54.19
KXG22496	Sorghum	plastid	54.87	54.18
TraesCS1D01G383500.1	Wheat	mitochondrion, plastid	52.72	53.53
TraesCS1B01G396800.2	Wheat	plastid	52.97	52.9
Bra022317.1-P	Field mustard	cytosol, endoplasmic reticulum	9.61	50.0
CDX95529	Canola	plastid	16.81	43.89
KRG92332	Soybean	plastid	37.42	35.45
KRH34465	Soybean	plastid	35.27	34.66
KRH02705	Soybean	plastid	34.77	34.63
KRH01727	Soybean	plastid	32.24	34.14
KRH70401	Soybean	plastid	23.14	31.18
KRH07419	Soybean	cytosol	8.85	26.82
KRG93409	Soybean	plastid	33.38	25.71
KRG93411	Soybean	plastid	33.0	25.24
KRH60382	Soybean	mitochondrion	11.5	24.53
KRH41679	Soybean	mitochondrion	11.13	23.72
KRH29618	Soybean	nucleus	7.84	21.83
KRH69093	Soybean	mitochondrion	11.0	19.46
KRH24621	Soybean	mitochondrion	10.11	18.74
KRH71856	Soybean	nucleus	11.0	16.8
KRH65957	Soybean	cytosol, mitochondrion, nucleus, plastid	10.11	16.03
KRG93197	Soybean	mitochondrion	11.0	13.32
KRH56532	Soybean	mitochondrion	10.87	13.17

Protein Annotations

EntrezGene:100808013	Gene3D:3.30.110.60	MapMan:35.1	EMBL:ACUP02005922	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G183900
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920
UniProt:K7LEQ1	EnsemblPlants:KRH39182	ProteinID:KRH39182	ProteinID:KRH39182.1	PFAM:PF01985	PFscan:PS51295
PANTHER:PTHR31846	PANTHER:PTHR31846:SF4	InterPro:RNA-binding_CRM	SMART:SM01103	SUPFAM:SSF75471	UniParc:UPI0002338FE3
InterPro:YhbY_like_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:40899100..40908348

Molecular Weight (calculated)

90309.7 Da

IEP (calculated)

5.516

GRAVY (calculated)

-0.674

Length

791 amino acids

Sequence
(BLAST)

001: MAFPNTCKLS ELSFNSSFAS LNHPHSSFRK FPFRTLTFAS LPTPKPNPSA PWLTKSPSPK RAVEPLPAGD PTPDRKPQNA VDRIVLRLRN LGLPSEEEEQ
101: EQEHEEEIPA TNPAPVTGEE RLGELLQREW VRPDAVLVGE DDDEEEEMML PWERDEEEKE VVVVSEEGLL KKRRVRAPSL ADLTLEDELL RRLRREGMRV
201: RERVSVPKAG LTEEVMEKIH KRWRKEELVR LKFHEELAKD MRKAHEIVER RTGGLVTWRS GSVMMVYRGI DYQGPDSRKE LNEKKGDGFF VPDVSKREDS
301: TATSTSEKSE VVVREREHPE NMSEAEAEYN ALLDGLGPRF FGWWGTGILP VDADLLPRTV PGYKTPFRLL PTGMRSRLTN AEMTNLRKLA KSLPCHFAVG
401: RNRNHQGLAC AILKLWEKSL VSKIAVKRGI QNTNNELMAE ELKMLTGGTL LLRNKYFIVI YRGKDFVPTS VAAVLAEREE LTKQVQDVED KVRCRAVDAI
501: PSGQGEATAQ AGTLAEFYEA QARWGREISP DEREKMMEEA AKAKTAKLVR QIEHKIFIAQ TKKLRAEKLL AKIEASMVPA GPDYDQETIT DEERVMFRKV
601: GLRMKPYLPL GIRGVFDGVV ENMHLHWKHR ELVKLMTKQK TLAFVEDTAR LLEYESGGIL VAIEKVSKEF ALIYYRGKNY KRPITLRPRN LLTKGKALKR
701: HVAMQRHEAL SQHITELEKT IEQMKKELGM TQDSDVEDGG SIEEDDHNQI DISELALSED EDSDGYDDEE DSDWDDGEAS EFSEFINDEH P

Best Arabidopsis Sequence Match ( AT3G18390.1 )
(BLAST)

001: MALAPLNFTE MPLRSSLPLT SSSRYCSSPS LHALLFYSLG VKPSRQQIVR PFSSLRTSER SNNRSNNNRR LDQRNHKPTP PWIDKWPPSS SGAGGDHAGK
101: KGGENNGGDR IRSAEEEAEA KLRYLEKDKG QNAIERIVLR LRNLGLGSDD EDDVEDDEGG GINGGDVKPV TGEERLGDLL KREWVRPDMM LAEGEESEEE
201: DEVLLPWEKN EEEQAAERVV GEGGVAVMQK RRARAPSLAE LTVEDSELRR LRRDGMYLRV RINIPKAGLT QAVMEKIYDT WRKEELVRLK FHEVLARDMK
301: TAHEIVERRT GGMVIWRAGS VMVVYRGLDY KGPPVISNQM AGPKETLFVP DVSSAGDEAT NAKDNQSAPL VIKDPIIKNP IRKENMTEEE VEFNSLLDSL
401: GPRFQEWWGT GVLPVDADLL PPTIPGYKTP FRLLPTGMRS NLTNAEMTNL RKIGKTLPCH FALGRNRNHQ GLAAAILQIW EKSLIAKIAV KRGIQNTNNK
501: LMADEVKTLT GGVLLLRNKY YIVIYRGKDF LPSSVAATLA ERQELTKEIQ DVEERVRNRE IEAVQPVGDK VPAEAGTLAE FYEAQARWGK EITPDHREKM
601: IEEASRVANA RVVKRIQHKL NLAQSKFQRA EKLLSKIEAS MIPNGPDYDQ EVISEEERAM FRKVGLKMKA YLPIGIRGVF DGVIENMHLH WKHRELVKLI
701: SKQKNQAFVE ETARLLEYES GGVLVAIEKV PKGFALIYYR GKNYRRPISL RPRNLLTKAK ALKRSIAMQR HEALSQHISE LERTIEQMQS QLTSKNPSYS
801: ESEWENDEDD DDDEEEEKDD VEDNESDWDE TDGESAISSI EEADMSSR

Arabidopsis Description

EMB1865CRS1 / YhbY (CRM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9LS51]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.