Factsheet for TraesCS7D01G222900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G128100.1	Wheat	mitochondrion	97.32	97.03
TraesCS7A01G219200.1	Wheat	mitochondrion	96.13	96.13
Os06t0304500-01	Rice	mitochondrion	79.76	77.01
EES12394	Sorghum	mitochondrion	74.4	73.96
Zm00001d025706_P002	Maize	mitochondrion	73.81	73.37
VIT_10s0092g00060.t01	Wine grape	nucleus	55.36	69.14
PGSC0003DMT400032783	Potato	mitochondrion	53.27	64.62
KRH07419	Soybean	cytosol	43.45	55.94
Bra034894.1-P	Field mustard	mitochondrion	52.98	55.11
CDY49592	Canola	mitochondrion	53.27	55.08
CDY34540	Canola	mitochondrion	52.98	54.94
GSMUA_Achr9P12700_001	Banana	mitochondrion	60.42	54.13
KRH60382	Soybean	mitochondrion	57.14	51.75
KRH41679	Soybean	mitochondrion	57.14	51.75
AT4G13070.1	Thale cress	mitochondrion	52.38	51.31
Solyc01g105090.2.1	Tomato	plastid	53.87	48.27
TraesCS3D01G505800.1	Wheat	mitochondrion	40.77	34.86
KRH65957	Soybean	cytosol, mitochondrion, nucleus, plastid	46.43	31.26
TraesCS2D01G347400.2	Wheat	mitochondrion, nucleus, plastid	33.33	19.44
TraesCS1D01G090300.1	Wheat	mitochondrion	30.65	16.91
TraesCS1D01G383500.1	Wheat	mitochondrion, plastid	27.38	11.81
TraesCS7D01G553500.1	Wheat	plastid	21.73	10.01
TraesCS4D01G150700.1	Wheat	plastid	23.51	9.27
TraesCS5D01G197600.1	Wheat	plastid	23.21	8.63
TraesCS2D01G327400.1	Wheat	plastid	22.62	7.0

Protein Annotations

EnsemblPlants:TraesCS7D01G222900.1	EnsemblPlantsGene:TraesCS7D01G222900	Gene3D:3.30.110.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920	InterPro:RNA-binding_CRM	InterPro:YhbY_like_sf	ncoils:Coil
PANTHER:PTHR31426	PANTHER:PTHR31426:SF3	PFAM:PF01985	PFscan:PS51295	SEG:seg	SMART:SM01103
SUPFAM:SSF75471	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:184186016..184187339

Molecular Weight (calculated)

38632.6 Da

IEP (calculated)

10.494

GRAVY (calculated)

-0.886

Length

336 amino acids

Sequence
(BLAST)

001: MASLVPRLLG RRTLQPAVAL RSPRDPWMRF HGANPPRPCP LFRPSPGVDG CARAARRWWF LSPVRHGSTA VTLNTDGGFA RFSVGDPGPN QNGGQNQPPA
101: KKKMSKKSKV NQLKWYRLKA KKKMKSPNPE VRIRYKLGKA KRKEEWLIEK LRKYEAPRAP EPVHDPEILT EEEKFYLKRT GEKKKNYVPV GRRGVFGGVV
201: LNMHLHWKKH ETMQVVCKPC RPGQVYEYAE ELARLSKGTV IDIKPNNTII FYRGKNYVQP KVMSPPDTLS KQKALEKYRY EQSLEHTSKF VEQLEQELED
301: YQKHVALFKK REGAISEQIS NEDSAVDDLT TNSDTD

Best Arabidopsis Sequence Match ( AT4G13070.1 )
(BLAST)

001: MLALGYAKEI AQRFLRNPKW TSRFFLLHYQ SSNYSSYVKS RPFLQVQCKS ASFDVSQAQR WNLFAYDGLF SRRYLSNSTI ELRTDDNVVR FAFNNVSSSG
101: NNVVPTRKEK KWKRAKLSRK AKVNELRFYR LKAKKKMNSP NPEVRIRYKL EKAKRKEEWL IEKLRKYDVP KSPAEPYDPE SLTEEEQHYL KRTGEKRKNF
201: VLVGRRGVFG GVVLNLHLHW KKHETVKVIC KPCNKPGQVH EYAEELARLS KGIVIDVKPN NTIVLYRGKN YVRPEVMSPV DTLSKDKALE KYRYEQSLEH
301: TSEFIEKLEK ELEEYHKYVA RHKKKKDEEA EKKKEAVSKS KVV

Arabidopsis Description

At4g13070 [Source:UniProtKB/TrEMBL;Acc:Q67YJ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.