Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G108100.1 | Wheat | mitochondrion | 96.72 | 96.56 |
| TraesCS1A01G108800.1 | Wheat | mitochondrion | 96.22 | 96.07 |
| HORVU1Hr1G019580.2 | Barley | plastid | 84.73 | 90.21 |
| Os05t0145300-01 | Rice | mitochondrion | 69.13 | 75.18 |
| Zm00001d024823_P001 | Maize | mitochondrion | 69.62 | 64.83 |
| Zm00001d010884_P001 | Maize | mitochondrion | 68.64 | 64.81 |
| EES17695 | Sorghum | plastid | 72.58 | 64.53 |
| CDY66660 | Canola | plastid | 44.01 | 59.29 |
| Bra033017.1-P | Field mustard | plastid | 46.63 | 58.92 |
| CDY13722 | Canola | mitochondrion, nucleus, plastid | 46.47 | 56.6 |
| CDX83707 | Canola | mitochondrion, nucleus, plastid | 46.63 | 56.35 |
| Bra025285.1-P | Field mustard | plastid | 48.93 | 56.12 |
| AT3G27550.2 | Thale cress | mitochondrion | 49.1 | 54.66 |
| GSMUA_Achr9P19780_001 | Banana | nucleus | 47.78 | 51.41 |
| PGSC0003DMT400015748 | Potato | nucleus, plastid | 44.01 | 50.28 |
| Solyc07g047900.2.1 | Tomato | mitochondrion, nucleus | 45.48 | 48.34 |
| KRH56532 | Soybean | mitochondrion | 50.41 | 47.01 |
| KRG93197 | Soybean | mitochondrion | 50.08 | 46.71 |
| CDY03983 | Canola | cytosol | 44.17 | 36.75 |
| TraesCS7D01G222900.1 | Wheat | mitochondrion | 16.91 | 30.65 |
| VIT_14s0066g00360.t01 | Wine grape | nucleus | 48.77 | 27.84 |
| TraesCS3D01G505800.1 | Wheat | mitochondrion | 15.76 | 24.43 |
| TraesCS2D01G347400.2 | Wheat | mitochondrion, nucleus, plastid | 17.08 | 18.06 |
| TraesCS1D01G383500.1 | Wheat | mitochondrion, plastid | 14.45 | 11.3 |
| TraesCS4D01G150700.1 | Wheat | plastid | 13.46 | 9.62 |
| TraesCS7D01G553500.1 | Wheat | plastid | 10.18 | 8.5 |
| TraesCS5D01G197600.1 | Wheat | plastid | 12.32 | 8.3 |
| TraesCS2D01G327400.1 | Wheat | plastid | 14.45 | 8.11 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G090300.1 | EnsemblPlantsGene:TraesCS1D01G090300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| InterPro:IPR001890 | InterPro:IPR035920 | InterPro:RNA-binding_CRM | InterPro:YhbY_like_sf | ncoils:Coil | PANTHER:PTHR31426 |
| PANTHER:PTHR31426:SF4 | PFAM:PF01985 | PFscan:PS51295 | SEG:seg | SMART:SM01103 | SUPFAM:SSF75471 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:76787658..76791187
Molecular Weight (calculated)
69733.9 Da
IEP (calculated)
8.794
GRAVY (calculated)
-1.147
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MWALRSLRRT LPKAASSSLH RRCAPSISSV GFKAWGGGGE AAAASISAAL VPAGAGGGGV CRRLMSTSKG RSIRSKVEKR MGRETGRTQK ELRHAVKLRK
101: KLMTEDERLI HSMRRAKKKV ALLLQKLKKY ELPDLPAPRH DPELLTAEQL QAYKKIGFRN RNYVPVGVRG VFGGVVQNMH MHWKFHETVQ VCCDNFPKEK
201: IKEMASMLTR LSGGIVVNIH NTKTIIMFRG RNYRQPKNLI PFNTLTKRKA LFKARYEQAL ESQKLNIKKI ETQLRRKGIN PEDPVAMASI QRVASRFFRA
301: IDEQQGTPYV FHGDKQPTAG TTELKEADVE PAEDSDQEEL DNFIAEIENA AEKQWEEEEA AEKEETSRLQ YRYREEMMGE RRGFNRSYDN SDADDRTQGR
401: YRRDNDNNKW ATDTRRWDDD SEIEASGEDV GERRGFGRRY DNSDAEDRSQ GRYRRENKNN RRTSGSSRLD DDTEASGEDW DTDDGRDSMV CFDKERHIPD
501: EHPRRFDSMR HDRSSSSHRQ NYMPGASRSP SRTPKNAVSV SDDSEDDVSD SEDDEVWGAD YKEETSSSAP KVNFPNYKSS SEEDTGDNWM RGGRTSRTKK
601: NTDEDWDSD
101: KLMTEDERLI HSMRRAKKKV ALLLQKLKKY ELPDLPAPRH DPELLTAEQL QAYKKIGFRN RNYVPVGVRG VFGGVVQNMH MHWKFHETVQ VCCDNFPKEK
201: IKEMASMLTR LSGGIVVNIH NTKTIIMFRG RNYRQPKNLI PFNTLTKRKA LFKARYEQAL ESQKLNIKKI ETQLRRKGIN PEDPVAMASI QRVASRFFRA
301: IDEQQGTPYV FHGDKQPTAG TTELKEADVE PAEDSDQEEL DNFIAEIENA AEKQWEEEEA AEKEETSRLQ YRYREEMMGE RRGFNRSYDN SDADDRTQGR
401: YRRDNDNNKW ATDTRRWDDD SEIEASGEDV GERRGFGRRY DNSDAEDRSQ GRYRRENKNN RRTSGSSRLD DDTEASGEDW DTDDGRDSMV CFDKERHIPD
501: EHPRRFDSMR HDRSSSSHRQ NYMPGASRSP SRTPKNAVSV SDDSEDDVSD SEDDEVWGAD YKEETSSSAP KVNFPNYKSS SEEDTGDNWM RGGRTSRTKK
601: NTDEDWDSD
001: MFVSRSLSRH CWRTCKWSLF SLLQSDSCVR NLVSSSNPVT SIGNSSEGNS NSFQPLMNQV FKGWSRGMST SRGRSMRSKV ESRMRKESGK TLREIRRAKK
101: LKKKLMTDEE RLIYNLKRAK KKVALLLQKL KKYDLPELPS PVHDPELFTS EQVQAFKKIG FKNKNYVPVG VRGVFGGVVQ NMHMHWKFHE TVQVCCDNFP
201: KEKIKEMASM IARLSGGVVI NIHNVKTIIM FRGRNYRQPK NLIPVNTLTK RKALFKARFE QALESQKLNI KKTEQQLRRM GVNPEDPVAM ASIHRVASTF
301: FNAIDKKEGT PYVFHGDKQS ERGTSVDNRE ESEPGDEDSD QEELDRFIAE IEEAADKEWE EEEAAEQEES GRIRYWNREE FAGRSRTPEL RSYGDASHGF
401: RRNDRDTHSQ RRPNDSDDDD DDGELDSEDD EIPKRFDRAR SSNTNTRRPR EDFKRRSPDP RPRPRAQVRS DDDVLSDLDN TMWDSEDEED APPANYISSS
501: DDDEDENRTV SASSSKQSRF RNNSSRDGIN NSKSKSGKQR DEDWDSD
101: LKKKLMTDEE RLIYNLKRAK KKVALLLQKL KKYDLPELPS PVHDPELFTS EQVQAFKKIG FKNKNYVPVG VRGVFGGVVQ NMHMHWKFHE TVQVCCDNFP
201: KEKIKEMASM IARLSGGVVI NIHNVKTIIM FRGRNYRQPK NLIPVNTLTK RKALFKARFE QALESQKLNI KKTEQQLRRM GVNPEDPVAM ASIHRVASTF
301: FNAIDKKEGT PYVFHGDKQS ERGTSVDNRE ESEPGDEDSD QEELDRFIAE IEEAADKEWE EEEAAEQEES GRIRYWNREE FAGRSRTPEL RSYGDASHGF
401: RRNDRDTHSQ RRPNDSDDDD DDGELDSEDD EIPKRFDRAR SSNTNTRRPR EDFKRRSPDP RPRPRAQVRS DDDVLSDLDN TMWDSEDEED APPANYISSS
501: DDDEDENRTV SASSSKQSRF RNNSSRDGIN NSKSKSGKQR DEDWDSD
Arabidopsis Description
RNA-binding CRS1 / YhbY (CRM) domain protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.