Factsheet for TraesCS7B01G128100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G222900.1	Wheat	mitochondrion	97.03	97.32
TraesCS7A01G219200.1	Wheat	mitochondrion	96.14	96.43
Os06t0304500-01	Rice	mitochondrion	80.42	77.87
EES12394	Sorghum	mitochondrion	74.18	73.96
Zm00001d025706_P002	Maize	mitochondrion	73.89	73.67
VIT_10s0092g00060.t01	Wine grape	nucleus	55.79	69.89
PGSC0003DMT400032783	Potato	mitochondrion	54.01	65.7
KRH07419	Soybean	cytosol	43.92	56.7
Bra034894.1-P	Field mustard	mitochondrion	53.41	55.73
CDY49592	Canola	mitochondrion	53.71	55.69
CDY34540	Canola	mitochondrion	53.41	55.56
GSMUA_Achr9P12700_001	Banana	mitochondrion	60.83	54.67
KRH60382	Soybean	mitochondrion	57.57	52.29
KRH41679	Soybean	mitochondrion	57.57	52.29
AT4G13070.1	Thale cress	mitochondrion	53.12	52.19
Solyc01g105090.2.1	Tomato	plastid	54.6	49.07
TraesCS3B01G562100.1	Wheat	mitochondrion	41.84	35.61
KRH65957	Soybean	cytosol, mitochondrion, nucleus, plastid	46.88	31.66
TraesCS2B01G367400.1	Wheat	mitochondrion	33.83	23.7
TraesCS1B01G108100.1	Wheat	mitochondrion	30.56	16.89
TraesCS1B01G396800.2	Wheat	plastid	27.3	11.62
TraesCS7B01G481800.1	Wheat	cytosol, plastid	21.07	9.74
TraesCS4B01G161000.1	Wheat	plastid	23.74	9.38
TraesCS5B01G190100.1	Wheat	plastid	24.33	8.43
TraesCS2B01G346500.1	Wheat	plastid	22.26	6.91

Protein Annotations

Gene3D:3.30.110.60	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920	PFAM:PF01985	PFscan:PS51295	PANTHER:PTHR31426
PANTHER:PTHR31426:SF3	InterPro:RNA-binding_CRM	SMART:SM01103	SUPFAM:SSF75471	EnsemblPlantsGene:TraesCS7B01G128100	EnsemblPlants:TraesCS7B01G128100.1
InterPro:YhbY_like_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:153437068..153438394

Molecular Weight (calculated)

38984.0 Da

IEP (calculated)

10.481

GRAVY (calculated)

-0.902

Length

337 amino acids

Sequence
(BLAST)

001: MASLVPRLLG RRALQPAVAL RSPRDPWMRF HGANPPRPCP LFRPSLGVDG CARAARRWWF LSPVRHRSTA VTLNTDGGFA RFSVGDPGTN QNGGQNQPQA
101: KKKKMSKKSK VNQLKWYRLK AKKKMKSPNP EVRIRYKLEK AKRKEEWLIE KLRKYEAPRA PEPVHDPEIL TEEEKFYLKR TGEKKKNYVP VGRRGVFGGV
201: VLNMHLHWKK HETMQVVCKP CRPGQVYEYA EELARLSKGT VIDIKPNNTI IFYRGKNYVQ PKVMSPPDTL SKQKALEKYR YEQSLEHTSK FIEQLEQELE
301: DYQKHVALFK KREGAISEQI SNEDSDVDDL TTSSDTD

Best Arabidopsis Sequence Match ( AT4G13070.1 )
(BLAST)

001: MLALGYAKEI AQRFLRNPKW TSRFFLLHYQ SSNYSSYVKS RPFLQVQCKS ASFDVSQAQR WNLFAYDGLF SRRYLSNSTI ELRTDDNVVR FAFNNVSSSG
101: NNVVPTRKEK KWKRAKLSRK AKVNELRFYR LKAKKKMNSP NPEVRIRYKL EKAKRKEEWL IEKLRKYDVP KSPAEPYDPE SLTEEEQHYL KRTGEKRKNF
201: VLVGRRGVFG GVVLNLHLHW KKHETVKVIC KPCNKPGQVH EYAEELARLS KGIVIDVKPN NTIVLYRGKN YVRPEVMSPV DTLSKDKALE KYRYEQSLEH
301: TSEFIEKLEK ELEEYHKYVA RHKKKKDEEA EKKKEAVSKS KVV

Arabidopsis Description

At4g13070 [Source:UniProtKB/TrEMBL;Acc:Q67YJ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.