Factsheet for GSMUA_Achr9P12700_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0092g00060.t01	Wine grape	nucleus	50.93	71.0
PGSC0003DMT400032783	Potato	mitochondrion	49.07	66.43
TraesCS7B01G128100.1	Wheat	mitochondrion	54.67	60.83
TraesCS7D01G222900.1	Wheat	mitochondrion	54.13	60.42
TraesCS7A01G219200.1	Wheat	mitochondrion	54.13	60.42
Zm00001d025706_P002	Maize	mitochondrion	54.13	60.06
EES12394	Sorghum	mitochondrion	53.6	59.47
Bra034894.1-P	Field mustard	mitochondrion	50.93	59.13
CDY34540	Canola	mitochondrion	50.93	58.95
Os06t0304500-01	Rice	mitochondrion	54.67	58.91
CDY49592	Canola	mitochondrion	50.67	58.46
KRH07419	Soybean	cytosol	39.73	57.09
AT4G13070.1	Thale cress	mitochondrion	49.87	54.52
KRH41679	Soybean	mitochondrion	52.53	53.1
KRH60382	Soybean	mitochondrion	52.27	52.83
Solyc01g105090.2.1	Tomato	plastid	51.47	51.47
KRH65957	Soybean	cytosol, mitochondrion, nucleus, plastid	42.13	31.66
GSMUA_Achr3P16860_001	Banana	mitochondrion	37.33	31.32
GSMUA_Achr2P05820_001	Banana	cytosol	25.87	29.66
GSMUA_Achr8P05570_001	Banana	cytosol	16.8	18.31
GSMUA_Achr9P19780_001	Banana	nucleus	26.93	17.84
GSMUA_Achr3P26360_001	Banana	plastid	21.87	10.68
GSMUA_Achr9P19190_001	Banana	plastid	19.73	9.43
GSMUA_Achr3P29330_001	Banana	cytosol, nucleus, plastid	21.07	9.31
GSMUA_Achr10P...	Banana	plastid	20.27	7.61
GSMUA_Achr8P05580_001	Banana	plasma membrane	4.27	2.74

Protein Annotations

EnsemblPlants:GSMUA_Achr9P12700_001	EnsemblPlants:GSMUA_Achr9T12700_001	EnsemblPlantsGene:GSMUA_Achr9G12700_001	Gene3D:3.30.110.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR001890	InterPro:IPR035920	InterPro:RNA-binding_CRM	InterPro:YhbY_like_sf
ncoils:Coil	PANTHER:PTHR31426	PANTHER:PTHR31426:SF3	PFAM:PF01985	PFscan:PS51295	SEG:seg
SMART:SM01103	SUPFAM:SSF75471	UniParc:UPI00029571C1	UniProt:M0TZS9	MapMan:35.1	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G12700_001]

Coordinates

chr9:-:8255944..8259216

Molecular Weight (calculated)

43821.3 Da

IEP (calculated)

10.465

GRAVY (calculated)

-0.705

Length

375 amino acids

Sequence
(BLAST)

001: MISASWFLRS KSVGLFRGLI SWCGRQGIPL SNPTRTSLVG SRNGYYLMNW TSHMHRCTCI SRLSMCTCSG PRGYKDMPFS SCVLVSSLIY HKPIIYNPFN
101: PQRWQSIRFR SNALVTLNTD DDVARFSVGI PNPKPGFQSR PTKKRKMMSR KAKLNELKWY RLKAKKKMKS PNPEVRIRYK LEKAKRKEEW LIEKLRKYEI
201: PKAPEQVHDP EILTEEERFY LRRTGEKKKN YVPVGRRGVF GGVVLNMHLH WKKHETVKVV CRPCRPGQIH EYAQELERLS KGTAIDVKAN NTIIFYRGKN
301: YVQPDIMSPP GTLSKQKALE KYRFEQSLEH TSEFIEKLEQ ELEEYHKHVA LYQKNKEITT KSTAGEEKHV EAVLL

Best Arabidopsis Sequence Match ( AT4G13070.1 )
(BLAST)

001: MLALGYAKEI AQRFLRNPKW TSRFFLLHYQ SSNYSSYVKS RPFLQVQCKS ASFDVSQAQR WNLFAYDGLF SRRYLSNSTI ELRTDDNVVR FAFNNVSSSG
101: NNVVPTRKEK KWKRAKLSRK AKVNELRFYR LKAKKKMNSP NPEVRIRYKL EKAKRKEEWL IEKLRKYDVP KSPAEPYDPE SLTEEEQHYL KRTGEKRKNF
201: VLVGRRGVFG GVVLNLHLHW KKHETVKVIC KPCNKPGQVH EYAEELARLS KGIVIDVKPN NTIVLYRGKN YVRPEVMSPV DTLSKDKALE KYRYEQSLEH
301: TSEFIEKLEK ELEEYHKYVA RHKKKKDEEA EKKKEAVSKS KVV

Arabidopsis Description

At4g13070 [Source:UniProtKB/TrEMBL;Acc:Q67YJ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.