Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025633_P007 | Maize | plastid | 100.0 | 100.0 |
| OQU81723 | Sorghum | plastid | 90.76 | 90.24 |
| TraesCS2B01G346500.1 | Wheat | plastid | 71.51 | 68.48 |
| TraesCS2D01G327400.1 | Wheat | plastid | 70.74 | 67.74 |
| Os04t0464800-00 | Rice | plastid | 55.25 | 66.98 |
| HORVU2Hr1G081140.2 | Barley | plastid | 69.59 | 66.45 |
| TraesCS2A01G335400.1 | Wheat | plastid | 70.84 | 65.83 |
| Solyc08g044250.1.1 | Tomato | mitochondrion | 3.27 | 61.82 |
| PGSC0003DMT400069622 | Potato | cytosol | 12.99 | 53.78 |
| GSMUA_Achr10P... | Banana | plastid | 47.26 | 49.15 |
| CDY49049 | Canola | plastid | 43.98 | 46.82 |
| CDY37526 | Canola | plastid | 43.89 | 46.48 |
| Bra039123.1-P | Field mustard | plastid | 44.18 | 46.32 |
| VIT_14s0066g01910.t01 | Wine grape | cytosol | 45.43 | 45.21 |
| AT3G01370.1 | Thale cress | plastid | 43.5 | 44.71 |
| KRG93409 | Soybean | plastid | 43.7 | 44.21 |
| PGSC0003DMT400003527 | Potato | plastid | 42.16 | 41.75 |
| KRG93411 | Soybean | plastid | 39.65 | 39.85 |
| Solyc02g087250.2.1 | Tomato | extracellular | 42.64 | 35.13 |
| Zm00001d007572_P001 | Maize | plastid | 28.2 | 34.8 |
| Zm00001d038922_P001 | Maize | extracellular | 23.68 | 30.94 |
| Zm00001d032373_P004 | Maize | plastid | 21.75 | 29.09 |
| Zm00001d020230_P006 | Maize | plastid | 22.71 | 24.48 |
| Zm00001d025706_P002 | Maize | mitochondrion | 7.12 | 21.89 |
| Zm00001d042043_P001 | Maize | mitochondrion | 8.28 | 21.83 |
| Zm00001d003196_P001 | Maize | mitochondrion | 8.28 | 17.73 |
| Zm00001d024823_P001 | Maize | mitochondrion | 7.51 | 11.93 |
| Zm00001d010884_P001 | Maize | mitochondrion | 7.22 | 11.63 |
Protein Annotations
| EntrezGene:100126359 | MapMan:16.12.2.1.2 | Gene3D:3.30.110.60 | ProteinID:AQK44114.1 | ProteinID:AQK44119.1 | ProteinID:AQK44125.1 |
| ProteinID:AQK44127.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| InterPro:IPR001890 | InterPro:IPR035920 | UniProt:K7U423 | PFAM:PF01985 | PFscan:PS51295 | PANTHER:PTHR31846 |
| PANTHER:PTHR31846:SF16 | InterPro:RNA-binding_CRM | SMART:SM01103 | SUPFAM:SSF75471 | UniParc:UPI0002216E7C | InterPro:YhbY_like_sf |
| EnsemblPlantsGene:Zm00001d025629 | EnsemblPlants:Zm00001d025629_P007 | EnsemblPlants:Zm00001d025629_T007 | SEG:seg | : | : |
Description
CRM family member2 CRM family member2
Coordinates
chr10:-:124622824..124638535
Molecular Weight (calculated)
115141.0 Da
IEP (calculated)
9.383
GRAVY (calculated)
-0.570
Length
1039 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLLSFSPHFS PLLISLPSTS ACKPHARLRP VHASASASTS PELLGKSALR RISDKLRSLG YLETVSEPPT PAPNKSGDAP SPGEIFVPTP AQLPRHRVGS
0101: TLDPSWATGD GEASSTSRQR RRGRGRDASG SPSAPPSAAE LALPRDELRR LQGIGIRVRK RLKVGKAGIT EGIVNGIHER WRNAEVVKLR CEDVWAMNMR
0201: RTHEILERKT GGLVIWRSGS TIILYRGTNY TYPYFHHSER VDSFLDKESS DQSNSGDEDE TSSQHGSSHE KSSENPVVAC AEQIHVGEGN SQTIEYLNQS
0301: LSREKDTNHP VSSIKRLVFD ADEGNLDIRA GNPNEQHVRL QENTHPDSPN KFGPRDRSSL VAGVGSQNKF RLQLPGEVKL AEEADKLLDG LGPRFSGWWG
0401: YDPVPVDADL LPAIVPGYRR PFRLLPSGVP PKLTDREMTI LRRLAHALPF HYALGRSSNL QGLAASMIKL WERCEVAKIA LKRDAHNTDS ELITEEVKEL
0501: TGGTLLSRDK ESIVFYRGKD FLPPAVSLAI EKRRKLGSST IYKAKPGIEE SMPTQNDSVL KVSSDVSVHV REEGTSVTEN RAESLNTVAK DVETRLSQAI
0601: AEKAKAEKLI EELEKASPLS KAEVRETISE DERYMLRKVG LKMKQFLLLG RRGVFDGTIE NMHLHWKYRE LVKIICKEHR LEDVEYAART LEAESGGILV
0701: AVEKVSKGHA IIVYRGKNYK RPSKLRPKTL LSKRDALKRS LENQRCKSLK VHVLKLSKNI DYLRDQMNSS YYHKDMHDPS VNSVTLQQQD EEMPEVAPMS
0801: SEPEVEKWTS VEIDRALDLT KSGVPVEDMQ SKVCFNKLED DSSATAGPCL TGSSIAASSY NLIRHQNQRS STVTSSPDGR YEGAPSKVVD APKLDAESLS
0901: VSPLRAAPLS NQERLVLRKQ ALQMKKRPVL SIGRNNAITG VAKTIKTHFK KHPLAIVNIK NRADGTPIQQ LISELEEATG SVLVSRETNK VILYRGWGAE
1001: VAQKSSRESS TDEGEKEVIS PQLLEAIRLE CGLLPADSG
0101: TLDPSWATGD GEASSTSRQR RRGRGRDASG SPSAPPSAAE LALPRDELRR LQGIGIRVRK RLKVGKAGIT EGIVNGIHER WRNAEVVKLR CEDVWAMNMR
0201: RTHEILERKT GGLVIWRSGS TIILYRGTNY TYPYFHHSER VDSFLDKESS DQSNSGDEDE TSSQHGSSHE KSSENPVVAC AEQIHVGEGN SQTIEYLNQS
0301: LSREKDTNHP VSSIKRLVFD ADEGNLDIRA GNPNEQHVRL QENTHPDSPN KFGPRDRSSL VAGVGSQNKF RLQLPGEVKL AEEADKLLDG LGPRFSGWWG
0401: YDPVPVDADL LPAIVPGYRR PFRLLPSGVP PKLTDREMTI LRRLAHALPF HYALGRSSNL QGLAASMIKL WERCEVAKIA LKRDAHNTDS ELITEEVKEL
0501: TGGTLLSRDK ESIVFYRGKD FLPPAVSLAI EKRRKLGSST IYKAKPGIEE SMPTQNDSVL KVSSDVSVHV REEGTSVTEN RAESLNTVAK DVETRLSQAI
0601: AEKAKAEKLI EELEKASPLS KAEVRETISE DERYMLRKVG LKMKQFLLLG RRGVFDGTIE NMHLHWKYRE LVKIICKEHR LEDVEYAART LEAESGGILV
0701: AVEKVSKGHA IIVYRGKNYK RPSKLRPKTL LSKRDALKRS LENQRCKSLK VHVLKLSKNI DYLRDQMNSS YYHKDMHDPS VNSVTLQQQD EEMPEVAPMS
0801: SEPEVEKWTS VEIDRALDLT KSGVPVEDMQ SKVCFNKLED DSSATAGPCL TGSSIAASSY NLIRHQNQRS STVTSSPDGR YEGAPSKVVD APKLDAESLS
0901: VSPLRAAPLS NQERLVLRKQ ALQMKKRPVL SIGRNNAITG VAKTIKTHFK KHPLAIVNIK NRADGTPIQQ LISELEEATG SVLVSRETNK VILYRGWGAE
1001: VAQKSSRESS TDEGEKEVIS PQLLEAIRLE CGLLPADSG
0001: MLLPLFHQQP LILAKTFPDR IFPPFLVPNT LVSRRNVSRA NSGIFCSSAS GRKTLPQSAI QRIAEKLRSL GFVEEKHDSP TRRITGEESG KNSPGEIFVP
0101: LPKQLPIHRV GHTIDTSWST PSYPVPKPGS GTAISRYHEL KRVWKKETEM ERKKEEKVPS LAELTLPPAE LRRLRTVGIR LTKKLKIGKA GITEGIVNGI
0201: HERWRTTEVV KIFCEDISRM NMKRTHDVLE TKTGGLVIWR SGSKILLYRG VNYQYPYFVS DRDLAHEAAS GASSMDQGVV DSREKQSIAE SSAPSITNKM
0301: VKPMLTQGVG SPDKVRFQLP GEVQLVEEAD RLLEGLGPRF TDWWAYDPLP VDGDLLPAVV PDYRRPFRLL PYGVSPKLTD DEMTTIRRLG RPLPCHFALG
0401: RNRNLQGLAV AIVKLWEKCE LAKIAVKRGV QNTNSELMAE ELKWLTGGTL ISRDKDFIVL YRGKDFLPSA VSSAIEERRR QTMIMENSSV HGNKLTENEE
0501: EIKPRAVKED IELEAKDQKD HIQTHQMKSR QRNSPEAILE KTSMKLSMAL EKKANAEKVL ADLENRESPQ LSDIDKEGIT NDEKYMLRKI GLKMKPFLLL
0601: GRRGVFDGTI ENMHLHWKYR ELVKIICNEY SIEAAHKVAE ILEAESGGIL VAVEMVSKGY AIIVYRGKNY ERPQCLRPQT LLSKREALKR SVEAQRRKSL
0701: KLHVLKLSNN IEELNRQLVE DSATNETWSD GESSNMMVEE ETENQHTEPE KAREKIELGY SSDLSVPSSG EENWEDDSEG EVDPLTTSSQ EYQEDESESA
0801: SSQRHEGNSL DSTANLSVFA ETGSANASSF HDRSLPHNSF LNANRKLPGS STGSGSQISA LRERKSENDG LVTDLSNRER LILRKQALKM KKRPPFAVGR
0901: SNVVTGLART LKMHFQKNPL AIVNVKGRAN GTSVQEVIAK LKEETGALLV SQEPSKVILY RGWGAEEEMK SFYPNNNVKS SINLPSTRSF VDDPPHVSPA
1001: LIEAIRLECG L
0101: LPKQLPIHRV GHTIDTSWST PSYPVPKPGS GTAISRYHEL KRVWKKETEM ERKKEEKVPS LAELTLPPAE LRRLRTVGIR LTKKLKIGKA GITEGIVNGI
0201: HERWRTTEVV KIFCEDISRM NMKRTHDVLE TKTGGLVIWR SGSKILLYRG VNYQYPYFVS DRDLAHEAAS GASSMDQGVV DSREKQSIAE SSAPSITNKM
0301: VKPMLTQGVG SPDKVRFQLP GEVQLVEEAD RLLEGLGPRF TDWWAYDPLP VDGDLLPAVV PDYRRPFRLL PYGVSPKLTD DEMTTIRRLG RPLPCHFALG
0401: RNRNLQGLAV AIVKLWEKCE LAKIAVKRGV QNTNSELMAE ELKWLTGGTL ISRDKDFIVL YRGKDFLPSA VSSAIEERRR QTMIMENSSV HGNKLTENEE
0501: EIKPRAVKED IELEAKDQKD HIQTHQMKSR QRNSPEAILE KTSMKLSMAL EKKANAEKVL ADLENRESPQ LSDIDKEGIT NDEKYMLRKI GLKMKPFLLL
0601: GRRGVFDGTI ENMHLHWKYR ELVKIICNEY SIEAAHKVAE ILEAESGGIL VAVEMVSKGY AIIVYRGKNY ERPQCLRPQT LLSKREALKR SVEAQRRKSL
0701: KLHVLKLSNN IEELNRQLVE DSATNETWSD GESSNMMVEE ETENQHTEPE KAREKIELGY SSDLSVPSSG EENWEDDSEG EVDPLTTSSQ EYQEDESESA
0801: SSQRHEGNSL DSTANLSVFA ETGSANASSF HDRSLPHNSF LNANRKLPGS STGSGSQISA LRERKSENDG LVTDLSNRER LILRKQALKM KKRPPFAVGR
0901: SNVVTGLART LKMHFQKNPL AIVNVKGRAN GTSVQEVIAK LKEETGALLV SQEPSKVILY RGWGAEEEMK SFYPNNNVKS SINLPSTRSF VDDPPHVSPA
1001: LIEAIRLECG L
Arabidopsis Description
CFM2CRM-domain containing factor CFM2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8L7C2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.