Factsheet for Bra024132.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024130.1-P	Field mustard	cytosol	79.8	12.32
AT4G29750.1	Thale cress	plastid	77.78	9.16
KRH02705	Soybean	plastid	63.64	7.93
PGSC0003DMT400056675	Potato	cytosol, plastid	58.59	7.09
Solyc07g039500.2.1	Tomato	plastid	57.58	7.02
VIT_11s0016g02100.t01	Wine grape	plastid	60.61	6.79
Bra033883.1-P	Field mustard	mitochondrion	54.55	6.24
Bra037586.1-P	Field mustard	plastid	45.45	5.51
Os09t0363100-01	Rice	plastid	52.53	5.49
Bra001704.1-P	Field mustard	plastid	46.46	5.48
Bra036865.1-P	Field mustard	plastid	47.47	5.47
Zm00001d020230_P006	Maize	plastid	50.51	5.19
Bra039123.1-P	Field mustard	plastid	51.52	5.15
EER96635	Sorghum	plastid	49.49	5.09
TraesCS5A01G194600.1	Wheat	plastid	49.49	5.04
TraesCS5B01G190100.1	Wheat	plastid	49.49	5.04
HORVU5Hr1G057460.1	Barley	nucleus, plastid	49.49	4.89
Bra023555.1-P	Field mustard	golgi	40.4	3.64
TraesCS5D01G197600.1	Wheat	plastid	23.23	2.54
Bra034894.1-P	Field mustard	mitochondrion	7.07	2.17
GSMUA_Achr8P05570_001	Banana	cytosol	7.07	2.03
Bra000492.1-P	Field mustard	mitochondrion	5.05	1.41
Bra015127.1-P	Field mustard	plastid	6.06	1.38
Bra036994.1-P	Field mustard	nucleus	8.08	1.08
Bra011945.1-P	Field mustard	mitochondrion	2.02	1.04
Bra022317.1-P	Field mustard	cytosol, endoplasmic reticulum	1.01	0.66
Bra033017.1-P	Field mustard	plastid	3.03	0.62
Bra025285.1-P	Field mustard	plastid	3.03	0.56

Protein Annotations

EnsemblPlants:Bra024132.1	EnsemblPlants:Bra024132.1-P	EnsemblPlantsGene:Bra024132	PANTHER:PTHR31846	PANTHER:PTHR31846:SF7	SEG:seg
UniParc:UPI0002540D35	UniProt:M4E5S8	MapMan:35.2	:	:	:

Description

AT4G29750 (E=1e-026) | RNA binding

Coordinates

chrA03:+:27409056..27409639

Molecular Weight (calculated)

11297.0 Da

IEP (calculated)

8.333

GRAVY (calculated)

0.035

Length

99 amino acids

Sequence
(BLAST)

1: MLSELCELND LLDEIGPRFL DWTGCAPLPV DADLLPPLVM RYKCPFRILL QGVKPYLSNK EMTDMRRLAR TTPPHFALGR FISRCRQSTI SSFLLQASV

Best Arabidopsis Sequence Match ( AT4G29750.1 )
(BLAST)

001: MALCQFPLNL HTISSSTSSS PRFRRLQPLD TSTKPNFLIR RLRFHSFNHP VRFHTRELSV ITATIDIDTH QRKKTKRKPK PGFFEEISDK WSSRISPKTE
101: KLPWQKQEEQ IQHHEDEEDE EGDESSSNLS SGNGLSDKRT DSNRLYSANE PWSFPRPSGY MSAPWVNNGG SKGVNFTTSS EQGIQSSSFH DVTTVDRYRR
201: DNDSSDRAVD SDLDDGERGM IDSGNNKGIW RTRKSNTVEA ERIVPEHELK RLRNVALRMV ERVKVGSAGI TQALVEAIHE KWEVDEVVKL KFSEPYSLNM
301: KRTHEVLEKK TGGLVIWRSG SSVVLYRGIS YKLKCVQTFI KQNNLEANPE IHRSVEARDY VQEDGNYPKN VPKEQLSELC ELNDLLDEVG PRFHDWTGCA
401: PFPVDADLLP GYVEGYRCPF RILPQGVKPC LSNTEMTEMR RLARTSPPHF ALGRSRELQG LAKAMVKLWA KSAIAKIAIK RGVENTRNER MAEELKRLTR
501: GVLVSRNKEY IVFYRGNDFM PPAVAEALTE RQKEITEVLQ AKEDQAREMA STRATLTSQA KSPKTQLLAG TLAETIAASS RWAPNASSVD IEELKRESAS
601: IKRAALIRDL ELRLLYGKQK LRRAERDLAK VQKDLDPSEL PTDSEIITEE ERLLYRKIGL SMDPFLLLGR REVYDGTIEN MHLHWKHREL VKVIVRGKSL
701: PQVKHIAISL EAESGGVLVS VDKTMKGYAI ILYRGKNYQM PFRLRPSNLL TRKKAFARSI ELQRREALKY HVADLEERIE LLKTGQDDDM ETRNKSDEEE
801: ENLYLRVDES DFSSDEDESL EWESEKNETF LSSEGKEEEE A

Arabidopsis Description

CRS1 / YhbY (CRM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JNR2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.