Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400056675 | Potato | cytosol, plastid | 94.09 | 93.4 |
| Bra024132.1-P | Field mustard | cytosol, plasma membrane, plastid | 7.02 | 57.58 |
| Solyc08g044250.1.1 | Tomato | mitochondrion | 3.82 | 56.36 |
| GSMUA_Achr8P05570_001 | Banana | cytosol | 23.52 | 55.52 |
| Bra024130.1-P | Field mustard | cytosol | 42.49 | 53.82 |
| CDY30199 | Canola | cytosol | 42.24 | 53.51 |
| KRH02705 | Soybean | plastid | 49.14 | 50.25 |
| VIT_11s0016g02100.t01 | Wine grape | plastid | 54.31 | 49.89 |
| CDY46704 | Canola | plastid | 45.69 | 47.38 |
| AT4G29750.1 | Thale cress | plastid | 45.94 | 44.35 |
| Os09t0363100-01 | Rice | plastid | 47.17 | 40.44 |
| EER96635 | Sorghum | plastid | 47.54 | 40.12 |
| Zm00001d020230_P006 | Maize | plastid | 47.29 | 39.83 |
| TraesCS5B01G190100.1 | Wheat | plastid | 47.54 | 39.67 |
| TraesCS5A01G194600.1 | Wheat | plastid | 47.41 | 39.57 |
| HORVU5Hr1G057460.1 | Barley | nucleus, plastid | 47.29 | 38.29 |
| TraesCS5D01G197600.1 | Wheat | plastid | 41.5 | 37.28 |
| Solyc09g083350.2.1 | Tomato | mitochondrion | 40.15 | 36.92 |
| Solyc03g119450.2.1 | Tomato | nucleus | 34.85 | 34.51 |
| Solyc02g086200.1.1 | Tomato | plastid | 29.19 | 29.55 |
| Solyc01g105090.2.1 | Tomato | plastid | 10.34 | 22.4 |
| Solyc02g087250.2.1 | Tomato | extracellular | 33.37 | 21.49 |
| Solyc09g005270.2.1 | Tomato | mitochondrion | 8.62 | 19.13 |
| Solyc06g082990.2.1 | Tomato | mitochondrion | 9.61 | 16.88 |
| Solyc12g014280.1.1 | Tomato | mitochondrion, plastid | 8.25 | 16.22 |
| Solyc07g047900.2.1 | Tomato | mitochondrion, nucleus | 9.36 | 13.26 |
Protein Annotations
| EnsemblPlants:Solyc07g039500.2.1 | EnsemblPlantsGene:Solyc07g039500.2 | Gene3D:3.30.110.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR001890 | InterPro:IPR035920 | InterPro:RNA-binding_CRM | InterPro:YhbY_like_sf | ncoils:Coil |
| PANTHER:PTHR31846 | PANTHER:PTHR31846:SF7 | PFAM:PF01985 | PFscan:PS51295 | SEG:seg | SMART:SM01103 |
| SUPFAM:SSF75471 | UniParc:UPI000276B60A | UniProt:K4CDS6 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7:+:47607150..47611780
Molecular Weight (calculated)
92442.5 Da
IEP (calculated)
9.514
GRAVY (calculated)
-0.647
Length
812 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAMASTPLS FDYISSKQLQ FSIPIPKIQD WHSCRAKNVV RVYCSSPQTI HSNREKQINE IKKQRKPRPS FVKQVQDKWS VKPTSLREKF PWQEGNSVSV
101: EEVVEAQVQI SKLENPVVND SVSSGSRVKV NLAPWVHGKQ PKISQLGESS SLDKSLENCE DIGSSREQKS LNKQVNVDGT DFEKDIKLES KVEAHVDKGI
201: TYANESVRLP WEGDKLRKSN AELAEKLIPE AQLKRLRNAA LRMVERIKVG SGGVTQELVD SIQKKWKVDE IVKLRFEGAP SHNMKRTHDI LEHRTGGLVI
301: WRSGSSIVLY RGISYKLPCV QSFTSKNHDV NESEYPNNDS CQSLGVKCLN EAVERPRNGS TDLSGEEIVD LSELNMILDE VGPRFKDWSG RGPMPVDADL
401: LPAVVPGYRP PFRRLPYGAK LNLKNKEMTY LRRTARIMPP HFALGRNRQL QGLAAAMVKL WRRSAIAKIA IKRGVLNTSN ERMAEELKVL TGGTLLSRNK
501: DYIVFYRGND FLSPRVTEAL EEAERKSDFL QDQEEQARQR AATSIDSDTR APKRPLVAGT LSETMAATSR WGNQPSIEER EKMLRDAAVA RHASLVKYLD
601: EKLALAKGKV KKAENMLRKL QENREPSELP TDLEILSAEE RFLFRKMGLS MKPFLLLGRR DVFDGTIENI HLHWKYRELV KIIAERRNAA QIKHIAITLE
701: AESGGLLVSI DKTTQGYAII LYRGKNYQRP NEFRPKNLLT KRQALARSIE LQRREALKHH ITELQDKIQN LKSELEDTEM VEEIDEETLF SRLDASDDED
801: DVEKQFDAED HN
101: EEVVEAQVQI SKLENPVVND SVSSGSRVKV NLAPWVHGKQ PKISQLGESS SLDKSLENCE DIGSSREQKS LNKQVNVDGT DFEKDIKLES KVEAHVDKGI
201: TYANESVRLP WEGDKLRKSN AELAEKLIPE AQLKRLRNAA LRMVERIKVG SGGVTQELVD SIQKKWKVDE IVKLRFEGAP SHNMKRTHDI LEHRTGGLVI
301: WRSGSSIVLY RGISYKLPCV QSFTSKNHDV NESEYPNNDS CQSLGVKCLN EAVERPRNGS TDLSGEEIVD LSELNMILDE VGPRFKDWSG RGPMPVDADL
401: LPAVVPGYRP PFRRLPYGAK LNLKNKEMTY LRRTARIMPP HFALGRNRQL QGLAAAMVKL WRRSAIAKIA IKRGVLNTSN ERMAEELKVL TGGTLLSRNK
501: DYIVFYRGND FLSPRVTEAL EEAERKSDFL QDQEEQARQR AATSIDSDTR APKRPLVAGT LSETMAATSR WGNQPSIEER EKMLRDAAVA RHASLVKYLD
601: EKLALAKGKV KKAENMLRKL QENREPSELP TDLEILSAEE RFLFRKMGLS MKPFLLLGRR DVFDGTIENI HLHWKYRELV KIIAERRNAA QIKHIAITLE
701: AESGGLLVSI DKTTQGYAII LYRGKNYQRP NEFRPKNLLT KRQALARSIE LQRREALKHH ITELQDKIQN LKSELEDTEM VEEIDEETLF SRLDASDDED
801: DVEKQFDAED HN
001: MALCQFPLNL HTISSSTSSS PRFRRLQPLD TSTKPNFLIR RLRFHSFNHP VRFHTRELSV ITATIDIDTH QRKKTKRKPK PGFFEEISDK WSSRISPKTE
101: KLPWQKQEEQ IQHHEDEEDE EGDESSSNLS SGNGLSDKRT DSNRLYSANE PWSFPRPSGY MSAPWVNNGG SKGVNFTTSS EQGIQSSSFH DVTTVDRYRR
201: DNDSSDRAVD SDLDDGERGM IDSGNNKGIW RTRKSNTVEA ERIVPEHELK RLRNVALRMV ERVKVGSAGI TQALVEAIHE KWEVDEVVKL KFSEPYSLNM
301: KRTHEVLEKK TGGLVIWRSG SSVVLYRGIS YKLKCVQTFI KQNNLEANPE IHRSVEARDY VQEDGNYPKN VPKEQLSELC ELNDLLDEVG PRFHDWTGCA
401: PFPVDADLLP GYVEGYRCPF RILPQGVKPC LSNTEMTEMR RLARTSPPHF ALGRSRELQG LAKAMVKLWA KSAIAKIAIK RGVENTRNER MAEELKRLTR
501: GVLVSRNKEY IVFYRGNDFM PPAVAEALTE RQKEITEVLQ AKEDQAREMA STRATLTSQA KSPKTQLLAG TLAETIAASS RWAPNASSVD IEELKRESAS
601: IKRAALIRDL ELRLLYGKQK LRRAERDLAK VQKDLDPSEL PTDSEIITEE ERLLYRKIGL SMDPFLLLGR REVYDGTIEN MHLHWKHREL VKVIVRGKSL
701: PQVKHIAISL EAESGGVLVS VDKTMKGYAI ILYRGKNYQM PFRLRPSNLL TRKKAFARSI ELQRREALKY HVADLEERIE LLKTGQDDDM ETRNKSDEEE
801: ENLYLRVDES DFSSDEDESL EWESEKNETF LSSEGKEEEE A
101: KLPWQKQEEQ IQHHEDEEDE EGDESSSNLS SGNGLSDKRT DSNRLYSANE PWSFPRPSGY MSAPWVNNGG SKGVNFTTSS EQGIQSSSFH DVTTVDRYRR
201: DNDSSDRAVD SDLDDGERGM IDSGNNKGIW RTRKSNTVEA ERIVPEHELK RLRNVALRMV ERVKVGSAGI TQALVEAIHE KWEVDEVVKL KFSEPYSLNM
301: KRTHEVLEKK TGGLVIWRSG SSVVLYRGIS YKLKCVQTFI KQNNLEANPE IHRSVEARDY VQEDGNYPKN VPKEQLSELC ELNDLLDEVG PRFHDWTGCA
401: PFPVDADLLP GYVEGYRCPF RILPQGVKPC LSNTEMTEMR RLARTSPPHF ALGRSRELQG LAKAMVKLWA KSAIAKIAIK RGVENTRNER MAEELKRLTR
501: GVLVSRNKEY IVFYRGNDFM PPAVAEALTE RQKEITEVLQ AKEDQAREMA STRATLTSQA KSPKTQLLAG TLAETIAASS RWAPNASSVD IEELKRESAS
601: IKRAALIRDL ELRLLYGKQK LRRAERDLAK VQKDLDPSEL PTDSEIITEE ERLLYRKIGL SMDPFLLLGR REVYDGTIEN MHLHWKHREL VKVIVRGKSL
701: PQVKHIAISL EAESGGVLVS VDKTMKGYAI ILYRGKNYQM PFRLRPSNLL TRKKAFARSI ELQRREALKY HVADLEERIE LLKTGQDDDM ETRNKSDEEE
801: ENLYLRVDES DFSSDEDESL EWESEKNETF LSSEGKEEEE A
Arabidopsis Description
CRS1 / YhbY (CRM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JNR2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.