Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16286 | Canola | plastid | 75.08 | 79.09 |
| CDY29740 | Canola | plastid | 76.41 | 78.93 |
| Bra036865.1-P | Field mustard | plastid | 74.75 | 78.84 |
| AT3G23070.1 | Thale cress | plastid | 65.71 | 67.65 |
| KRG92332 | Soybean | plastid | 51.16 | 55.57 |
| VIT_05s0020g04770.t01 | Wine grape | plastid | 54.13 | 54.43 |
| Solyc09g083350.2.1 | Tomato | mitochondrion | 51.93 | 53.34 |
| KRH34465 | Soybean | plastid | 47.3 | 53.29 |
| PGSC0003DMT400002898 | Potato | mitochondrion | 51.82 | 53.23 |
| TraesCS4A01G150500.1 | Wheat | plastid | 41.46 | 50.61 |
| GSMUA_Achr3P29330_001 | Banana | cytosol, nucleus, plastid | 46.86 | 50.06 |
| TraesCS4B01G161000.1 | Wheat | plastid | 44.1 | 46.89 |
| TraesCS4D01G150700.1 | Wheat | plastid | 43.77 | 46.6 |
| Zm00001d007572_P001 | Maize | plastid | 42.23 | 45.49 |
| HORVU7Hr1G052190.1 | Barley | plastid | 44.43 | 45.43 |
| OQU83762 | Sorghum | cytosol, nucleus, plastid | 42.78 | 45.38 |
| Os11t0592400-00 | Rice | plastid | 43.44 | 44.47 |
| AT4G29750.1 | Thale cress | plastid | 33.19 | 35.79 |
| AT3G18390.1 | Thale cress | plastid | 31.97 | 34.2 |
| GSMUA_Achr8P05580_001 | Banana | plasma membrane | 20.4 | 31.73 |
| AT5G16180.1 | Thale cress | endoplasmic reticulum | 24.92 | 31.39 |
| AT3G01370.1 | Thale cress | plastid | 30.54 | 27.4 |
| AT4G13070.1 | Thale cress | mitochondrion | 8.38 | 22.16 |
| AT3G25440.1 | Thale cress | plastid | 10.8 | 22.07 |
| AT2G28480.1 | Thale cress | mitochondrion | 8.82 | 21.51 |
| AT3G27550.2 | Thale cress | mitochondrion | 8.49 | 14.08 |
Protein Annotations
| MapMan:16.12.2.1.3 | Gene3D:3.30.110.60 | EntrezGene:827098 | ProteinID:AEE83453.1 | ArrayExpress:AT4G14510 | EnsemblPlantsGene:AT4G14510 |
| RefSeq:AT4G14510 | TAIR:AT4G14510 | RefSeq:AT4G14510-TAIR-G | EnsemblPlants:AT4G14510.1 | TAIR:AT4G14510.1 | Symbol:ATCFM3B |
| ProteinID:CAB10230.1 | ProteinID:CAB78493.1 | InterPro:CFM3 | ncoils:Coil | UniProt:F4JVH1 | GO:GO:0000003 |
| GO:GO:0000373 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006397 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008380 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0030529 | GO:GO:0048316 | InterPro:IPR001890 | InterPro:IPR035920 | RefSeq:NP_193187.3 |
| PFAM:PF01985 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51295 | PANTHER:PTHR31846 | PANTHER:PTHR31846:SF13 | InterPro:RNA-binding_CRM |
| SMART:SM01103 | SUPFAM:SSF75471 | UniParc:UPI0001E92F08 | InterPro:YhbY_like_sf | SEG:seg | : |
Description
CFM3BCRM-domain containing factor CFM3B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JVH1]
Coordinates
chr4:-:8336701..8341174
Molecular Weight (calculated)
102037.0 Da
IEP (calculated)
6.057
GRAVY (calculated)
-0.653
Length
907 amino acids
Sequence
(BLAST)
(BLAST)
001: MAINSSHHFC PMTTTTTTSA KFVDSLGSSF CKFHGTSSSI SLRSYRFGFS FMKNVKRLSC EGSSSSSSSR NENWNRTQKQ NQFRPSKVVL NRRKDERFSD
101: LGVISGENSS RSGDVGGGSG SSSTMEKIVE KLKKYGFVDE DQFQDKEVEQ ERRIEKSSVE ERFYVEERRG GFSEESPFGV YGGNDEVKFP WEKVSSMEKK
201: ELVNGEWTAK KESRYSLAEM TLSEFELNRL RNVMFRTKSK MRVTGAGVTQ AVVDAIQEKW KGSEIVRLKI EGSSALNMRR MHEILERKTG GLVIWRSGTS
301: IALYNYKGGS NRDGSGNMNK QVYRRAERLP SSLPTSTVDQ SVQLVNLPQL EKEPTVVGNK DRTSPQEVEY EDEINELLEG LGPRYTDWQG GYPLPVDADL
401: LPGIVPGYEP PFRALPYGVR STLGTKEATS LRRIATVLPP HFALGRSRQL QGLATAMVKL WQKSLIAKVA LKRGVQLTTS ERMAEDIKRL TGGMLLSRNK
501: DFLVFYRGKS FLSLEVGEAL MEKEMLVRTL QDEEEQARLR ASSALVVPSI KANQQLARTL QDKEEQARPS ALVLPSTKAN QNLVSAGTLG ETLDATGKWG
601: KNLDNDDHVE EMKQEVEKVR SAKLVRKLER KLAFAEKKLL KAERALAKVE ESLKPAEQRT DLEGITEEER FMFQKLGLKM KAFLLLGRRG VFDGTVENMH
701: LHWKYRELIK ILVKAKTLEG AQKVAMALEA ESGGILVSVD KISKGYAVIV YRGKDYKRPT TLRPKNLLTK RKALARSLEL QKREALIKHI EAIQTRSEQL
801: RAEIEQVELV KDKGDETLYD KLDMAYSSDE ETEETDGEED DVYLDTYEDE GEDDEEGGIQ ANGSLSETDV EFGSDESDTD FGDNSASSTT PETTFVELQN
901: EELDVQP
101: LGVISGENSS RSGDVGGGSG SSSTMEKIVE KLKKYGFVDE DQFQDKEVEQ ERRIEKSSVE ERFYVEERRG GFSEESPFGV YGGNDEVKFP WEKVSSMEKK
201: ELVNGEWTAK KESRYSLAEM TLSEFELNRL RNVMFRTKSK MRVTGAGVTQ AVVDAIQEKW KGSEIVRLKI EGSSALNMRR MHEILERKTG GLVIWRSGTS
301: IALYNYKGGS NRDGSGNMNK QVYRRAERLP SSLPTSTVDQ SVQLVNLPQL EKEPTVVGNK DRTSPQEVEY EDEINELLEG LGPRYTDWQG GYPLPVDADL
401: LPGIVPGYEP PFRALPYGVR STLGTKEATS LRRIATVLPP HFALGRSRQL QGLATAMVKL WQKSLIAKVA LKRGVQLTTS ERMAEDIKRL TGGMLLSRNK
501: DFLVFYRGKS FLSLEVGEAL MEKEMLVRTL QDEEEQARLR ASSALVVPSI KANQQLARTL QDKEEQARPS ALVLPSTKAN QNLVSAGTLG ETLDATGKWG
601: KNLDNDDHVE EMKQEVEKVR SAKLVRKLER KLAFAEKKLL KAERALAKVE ESLKPAEQRT DLEGITEEER FMFQKLGLKM KAFLLLGRRG VFDGTVENMH
701: LHWKYRELIK ILVKAKTLEG AQKVAMALEA ESGGILVSVD KISKGYAVIV YRGKDYKRPT TLRPKNLLTK RKALARSLEL QKREALIKHI EAIQTRSEQL
801: RAEIEQVELV KDKGDETLYD KLDMAYSSDE ETEETDGEED DVYLDTYEDE GEDDEEGGIQ ANGSLSETDV EFGSDESDTD FGDNSASSTT PETTFVELQN
901: EELDVQP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.