Factsheet for TraesCS7B01G181500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G300100.3	plasma membrane
TraesCS2B01G316400.1	plasma membrane
TraesCS2D01G298000.2	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10380.1	TraesCS2A01G300100.3	AT1G76850.1	24307681
AT3G10380.1	TraesCS2B01G316400.1	AT1G76850.1	24307681
AT3G10380.1	TraesCS2D01G298000.2	AT1G76850.1	24307681

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G061620.1	Barley	plasma membrane	72.99	97.85
GSMUA_Achr3P23130_001	Banana	cytosol	45.45	74.89
VIT_13s0019g04810.t01	Wine grape	cytosol	17.11	74.42
TraesCS7A01G284500.1	Wheat	cytosol	94.39	33.52
Os08t0318500-01	Rice	plasma membrane	85.56	30.25
EER99853	Sorghum	cytosol	84.22	29.94
Zm00001d022502_P003	Maize	cytosol	84.49	29.56
KRH34813	Soybean	cytosol	62.3	21.86
KRG91961	Soybean	endoplasmic reticulum	62.03	21.78
AT3G10380.1	Thale cress	cytosol	60.7	21.56
CDY56705	Canola	cytosol	60.7	21.06
CDY08608	Canola	nucleus	59.36	21.04
Solyc11g008340.1.1	Tomato	nucleus	63.37	20.73
CDY41338	Canola	nucleus	59.63	20.67
CDY00928	Canola	cytosol	59.09	20.65
CDX73930	Canola	cytosol	57.75	20.3
Bra001356.1-P	Field mustard	cytosol	57.75	20.13
Bra029834.1-P	Field mustard	cytosol	59.09	20.05
CDY00666	Canola	cytosol	56.95	20.02
GSMUA_Achr3P23140_001	Banana	cytosol	19.25	8.58
TraesCS7D01G282100.6	Wheat	plastid	1.87	1.65
HORVU7Hr1G061610.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7B01G181500.1	EnsemblPlantsGene:TraesCS7B01G181500	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006904	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031
InterPro:Sec8_exocyst	PANTHER:PTHR14146	PFAM:PF04048	SEG:seg	TMHMM:TMhelix	MapMan:22.6.3.5

Description

No Description!

Coordinates

chr7B:-:275454250..275462772

Molecular Weight (calculated)

41699.2 Da

IEP (calculated)

6.836

GRAVY (calculated)

-0.149

Length

374 amino acids

Sequence
(BLAST)

001: MNRHRRGIFD GLPIPADKSY LKEGLSRIDE GWAAARFDSL PHVVHILTSK DRDGEIQFLK EQSDLIEDVV DEVVHAYHHG FNKAIQNYSQ ILRLFSESAE
101: SITGLKGEMA EAKKLLGRKN QHLGQLWYRS LTLRHVISLL DQVEDVAKVP ARIENLMAEK QLYAAVQLHV QSMLMLEREG LQAVGALQDV RSDLTKLRGA
201: LFYKILEELH CHLYNNGEYS LVTLSMVDSE DIPTSGATGR LVNSMQPLSR RTMSIKGENH FSGPATADGI TKTSSVGCSS FDGPDDDSSL GGGCGRKDSK
301: SFSCEIPIFL SCATPDEFLE SMRKADAPLN VKYLRTLVQC LSMLRKVAAA GAVIWYLHSI LFYIFVTLSK LCIY

Best Arabidopsis Sequence Match ( AT3G10380.1 )
(BLAST)

0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH

Arabidopsis Description

SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.