Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra003706.1-P | plasma membrane |
| Bra008282.1-P | plasma membrane |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10380.1 | Bra003706.1-P | AT1G76850.1 | 24307681 |
| AT3G10380.1 | Bra008282.1-P | AT1G76850.1 | 24307681 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00928 | Canola | cytosol | 96.1 | 98.97 |
| CDY08608 | Canola | nucleus | 94.74 | 98.96 |
| AT3G10380.1 | Thale cress | cytosol | 89.2 | 93.35 |
| Bra001356.1-P | Field mustard | cytosol | 85.21 | 87.51 |
| KRG91961 | Soybean | endoplasmic reticulum | 70.6 | 73.05 |
| KRH34813 | Soybean | cytosol | 70.51 | 72.89 |
| VIT_13s0019g04770.t01 | Wine grape | cytosol | 65.88 | 70.97 |
| HORVU7Hr1G061610.1 | Barley | cytosol | 7.99 | 68.22 |
| GSMUA_Achr3P23130_001 | Banana | cytosol | 13.97 | 67.84 |
| Solyc11g008340.1.1 | Tomato | nucleus | 68.6 | 66.14 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 15.52 | 61.29 |
| Os08t0318500-01 | Rice | plasma membrane | 58.08 | 60.49 |
| EER99853 | Sorghum | cytosol | 57.17 | 59.89 |
| TraesCS7A01G284500.1 | Wheat | cytosol | 56.99 | 59.64 |
| TraesCS7B01G181500.1 | Wheat | cytosol | 20.05 | 59.09 |
| Zm00001d022502_P003 | Maize | cytosol | 57.17 | 58.93 |
| TraesCS7D01G282100.6 | Wheat | plastid | 22.5 | 58.63 |
| GSMUA_Achr3P23140_001 | Banana | cytosol | 44.1 | 57.93 |
| HORVU7Hr1G061640.1 | Barley | cytosol | 13.52 | 56.44 |
Protein Annotations
| MapMan:22.6.3.5 | EnsemblPlantsGene:Bra029834 | EnsemblPlants:Bra029834.1 | EnsemblPlants:Bra029834.1-P | GO:GO:0000145 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006904 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015031 | UniProt:M4EM14 | PFAM:PF04048 | PANTHER:PTHR14146 | InterPro:Sec8_exocyst |
| UniParc:UPI0002547957 | SEG:seg | : | : | : | : |
Description
AT3G10380 (E=1e-275) SEC8, ATSEC8 | SEC8 (SUBUNIT OF EXOCYST COMPLEX 8)
Coordinates
chrA05:+:22067948..22076166
Molecular Weight (calculated)
122122.0 Da
IEP (calculated)
5.565
GRAVY (calculated)
-0.259
Length
1102 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFTISSPDLN SMSTSFFIAL ECAEEGTLIW TLHMGIFDGL PVPSDKTYLR EELARIDESW VAARFDSLPH VVHIITSKDR ETDMLLLREQ SDVVEEVVDE
0101: VVHAYHGGFN KAIQNYSQIL RLFSESTDKI GDLKHDLAEA KKSLGTRNKQ LHQLWYRSVT LRHIIALLDQ IEGIAKVPSR IEKLIADKQF YAAIQVYLQS
0201: SLMLEREGLQ TVGALQDVRS ELAKLRGALF FKILDDLHAH LYNRGEYSSV ASSIYERDDE VPTTTAVAAS RMSSQPLSRR TRTLKGDSQF GVRGLTNGSH
0301: RTASTEEGSS FDGHDEEDSV EHDEATGDGQ TIRNGTDSKL LSYQLPPWLS DSSPDEFIEA VRKSDDPLHV KYLQTLVQCL CMLGKVAAAG AIICQRLRPT
0401: IHEIIISKIK AHMETKSLSK SACSQGDRTG AAGLHFIKGQ SEAYRLSKDK PQNGTSNSGT HLAVSPVSPL MAPGGKAQAA AKDLLDSILD TIVKIFENHV
0501: VVGELLELRA SQHDINTPKS LPTDVNWNAD SEASQATGGY TISFPLTVLQ SECQQLICEI LRATPEAASA DAAAQTAKLA KKAPKKDKRQ VLLSALVKWS
0601: VEEDASEDGV TFTFRFTDAT VSISNQGADL IRQGWGKRAP NSSQEGYGSA AVLPEQGMYL AASIYRPVLQ FTDKITSMLP KKHSQLVNDG LLTFTENFVK
0701: DHLLPTMFVD YRKGVQQAIS SAAAFRPRAH TTTYTPTVEK GRPILQGLLA IDLLAKEVLG WAQAMPKFAT DLVKYVQTFL ERTFERCRTA YMEAVLEKLS
0801: YRLIGRHDIE RLMRLDAGSA CLPSQLGHSV SHSEAVGSEV ELCELFLNLP SIKQDNLIRD DNKLILLASL SDSLEYVADS IERLGQAVPR AASQAEGNRR
0901: NQATSPRNLA SFADEYRKLA TDCLKVLRVE MQLETVFHLQ EMTNREYLED EDAEEPDDFV ISLTSQITRR DEGMAPFISG EKRNYVFGGI CGIAASASIK
1001: ALADMRSINL FGVQQICRNT IALEQAMAAI PYVDGDSVQQ NLDRVRTYYE LLNMPFEALL AFIAEHDQMF TPTEYSNLLK VNVPGRDTPS DAQVRLSEIL
1101: SH
0101: VVHAYHGGFN KAIQNYSQIL RLFSESTDKI GDLKHDLAEA KKSLGTRNKQ LHQLWYRSVT LRHIIALLDQ IEGIAKVPSR IEKLIADKQF YAAIQVYLQS
0201: SLMLEREGLQ TVGALQDVRS ELAKLRGALF FKILDDLHAH LYNRGEYSSV ASSIYERDDE VPTTTAVAAS RMSSQPLSRR TRTLKGDSQF GVRGLTNGSH
0301: RTASTEEGSS FDGHDEEDSV EHDEATGDGQ TIRNGTDSKL LSYQLPPWLS DSSPDEFIEA VRKSDDPLHV KYLQTLVQCL CMLGKVAAAG AIICQRLRPT
0401: IHEIIISKIK AHMETKSLSK SACSQGDRTG AAGLHFIKGQ SEAYRLSKDK PQNGTSNSGT HLAVSPVSPL MAPGGKAQAA AKDLLDSILD TIVKIFENHV
0501: VVGELLELRA SQHDINTPKS LPTDVNWNAD SEASQATGGY TISFPLTVLQ SECQQLICEI LRATPEAASA DAAAQTAKLA KKAPKKDKRQ VLLSALVKWS
0601: VEEDASEDGV TFTFRFTDAT VSISNQGADL IRQGWGKRAP NSSQEGYGSA AVLPEQGMYL AASIYRPVLQ FTDKITSMLP KKHSQLVNDG LLTFTENFVK
0701: DHLLPTMFVD YRKGVQQAIS SAAAFRPRAH TTTYTPTVEK GRPILQGLLA IDLLAKEVLG WAQAMPKFAT DLVKYVQTFL ERTFERCRTA YMEAVLEKLS
0801: YRLIGRHDIE RLMRLDAGSA CLPSQLGHSV SHSEAVGSEV ELCELFLNLP SIKQDNLIRD DNKLILLASL SDSLEYVADS IERLGQAVPR AASQAEGNRR
0901: NQATSPRNLA SFADEYRKLA TDCLKVLRVE MQLETVFHLQ EMTNREYLED EDAEEPDDFV ISLTSQITRR DEGMAPFISG EKRNYVFGGI CGIAASASIK
1001: ALADMRSINL FGVQQICRNT IALEQAMAAI PYVDGDSVQQ NLDRVRTYYE LLNMPFEALL AFIAEHDQMF TPTEYSNLLK VNVPGRDTPS DAQVRLSEIL
1101: SH
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
Arabidopsis Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.