Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr6P25360_001 | plasma membrane |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10380.1 | GSMUA_Achr6P25360_001 | AT1G76850.1 | 24307681 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G061640.1 | Barley | cytosol | 22.17 | 70.45 |
| TraesCS7D01G282100.6 | Wheat | plastid | 32.54 | 64.54 |
| HORVU7Hr1G061610.1 | Barley | cytosol | 9.06 | 58.91 |
| EER99853 | Sorghum | cytosol | 63.17 | 50.38 |
| TraesCS7A01G284500.1 | Wheat | cytosol | 62.57 | 49.86 |
| Os08t0318500-01 | Rice | plasma membrane | 62.34 | 49.43 |
| Zm00001d022502_P003 | Maize | cytosol | 61.98 | 48.64 |
| KRH34813 | Soybean | cytosol | 61.5 | 48.41 |
| KRG91961 | Soybean | endoplasmic reticulum | 61.38 | 48.36 |
| AT3G10380.1 | Thale cress | cytosol | 59.0 | 47.01 |
| CDY08608 | Canola | nucleus | 57.81 | 45.97 |
| CDY00928 | Canola | cytosol | 57.93 | 45.42 |
| CDY56705 | Canola | cytosol | 57.81 | 44.99 |
| Solyc11g008340.1.1 | Tomato | nucleus | 61.26 | 44.97 |
| CDX73930 | Canola | cytosol | 56.73 | 44.74 |
| CDY41338 | Canola | nucleus | 57.09 | 44.39 |
| Bra001356.1-P | Field mustard | cytosol | 56.5 | 44.18 |
| CDY00666 | Canola | cytosol | 56.02 | 44.17 |
| Bra029834.1-P | Field mustard | cytosol | 57.93 | 44.1 |
| TraesCS7B01G181500.1 | Wheat | cytosol | 8.58 | 19.25 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 2.03 | 6.09 |
| GSMUA_Achr3P23130_001 | Banana | cytosol | 0.36 | 1.32 |
| VIT_13s0019g04810.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P23140_001 | EnsemblPlants:GSMUA_Achr3T23140_001 | EnsemblPlantsGene:GSMUA_Achr3G23140_001 | PANTHER:PTHR14146 | SEG:seg | UniParc:UPI0002949D93 |
| UniProt:M0SH30 | MapMan:22.6.3.5 | : | : | : | : |
Description
Probable exocyst complex component 4 [Source:GMGC_GENE;Acc:GSMUA_Achr3G23140_001]
Coordinates
chr3:+:23945328..23966963
Molecular Weight (calculated)
92380.9 Da
IEP (calculated)
5.124
GRAVY (calculated)
-0.159
Length
839 amino acids
Sequence
(BLAST)
(BLAST)
001: MFIIDSVDNS FCSATLSISE REDEVLTATG LEYSVNSLQP LSRRTRLVKV DSYFGGSVSA DGSYRPGSID DGSSFDGHDD DSVEIAESGA SDGAFPSARV
101: HAEGHIRSIS RQTPAWLSNA MPDEFLESMK KTDAPLYVKY LRTLVECLCM LGKVAAAGAV LCQRLRPTIH DIITSKIKVH AARKSSRSSI DPVTKKTQSD
201: VNDSKGIFEG FRVLKQKNKN NSSISGAQVV VSPVSPVMTP MGAAQAAVSE FLNSILDYVI HILENHVVVG ELLESKSSQQ GDNMVTPKSA SGDTVWGADS
301: ESSQTGGFSV GFSLTVIQSE CQQLICEILR ATPEAATADA ASLSANAAGF SCFIVPPKNG SEGLSFAFRF TDAAASIPNR GIHLMNSCQG WQRGPSAQQE
401: GYGTSAVLPD QGIYLAASVY RPVLQFTDKV ASMLPQKYSQ LGNEGLLAFV EKFLKDHFLP AMFVDYRKCI QQAISSKYYY PCPAAFRPRA NGSVYRPLVE
501: MGRPVLQGLL ATNCLAKEVL GWAHLMPKYA IELVEFVQTF LERAYERCRA SYTEAVLEKL SYMLIGRSDV EGLMRLHPSN VLLQKSHDEF SLENNVSDAE
601: TVEVEIEMSD LLLGLRPIKQ ENLIHDDHKL ILLASLSDSL EYLADSVERL GEIFGRPPAS TEDKIMNNQS HRHARSTSKI PKSFASIADE NRRLATDCLR
701: VLRLEMQLET IFHLQEMTNR EYLEDQDAEE PDDFIISLTT QIARRDEEMA PFVADIKRNY IFGGISSIAA NASIKALAEI KSINLLGVQQ ICRNSIALEQ
801: ALAAIPSIDS EAVQQRLDRV RTYYELLNLP FEALYQTLN
101: HAEGHIRSIS RQTPAWLSNA MPDEFLESMK KTDAPLYVKY LRTLVECLCM LGKVAAAGAV LCQRLRPTIH DIITSKIKVH AARKSSRSSI DPVTKKTQSD
201: VNDSKGIFEG FRVLKQKNKN NSSISGAQVV VSPVSPVMTP MGAAQAAVSE FLNSILDYVI HILENHVVVG ELLESKSSQQ GDNMVTPKSA SGDTVWGADS
301: ESSQTGGFSV GFSLTVIQSE CQQLICEILR ATPEAATADA ASLSANAAGF SCFIVPPKNG SEGLSFAFRF TDAAASIPNR GIHLMNSCQG WQRGPSAQQE
401: GYGTSAVLPD QGIYLAASVY RPVLQFTDKV ASMLPQKYSQ LGNEGLLAFV EKFLKDHFLP AMFVDYRKCI QQAISSKYYY PCPAAFRPRA NGSVYRPLVE
501: MGRPVLQGLL ATNCLAKEVL GWAHLMPKYA IELVEFVQTF LERAYERCRA SYTEAVLEKL SYMLIGRSDV EGLMRLHPSN VLLQKSHDEF SLENNVSDAE
601: TVEVEIEMSD LLLGLRPIKQ ENLIHDDHKL ILLASLSDSL EYLADSVERL GEIFGRPPAS TEDKIMNNQS HRHARSTSKI PKSFASIADE NRRLATDCLR
701: VLRLEMQLET IFHLQEMTNR EYLEDQDAEE PDDFIISLTT QIARRDEEMA PFVADIKRNY IFGGISSIAA NASIKALAEI KSINLLGVQQ ICRNSIALEQ
801: ALAAIPSIDS EAVQQRLDRV RTYYELLNLP FEALYQTLN
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
Arabidopsis Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.