Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d036062_P001 | plasma membrane |
| Zm00001d039959_P001 | plasma membrane |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10380.1 | Zm00001d036062_P001 | AT1G76850.1 | 24307681 |
| AT3G10380.1 | Zm00001d039959_P001 | AT1G76850.1 | 24307681 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99853 | Sorghum | cytosol | 94.39 | 95.91 |
| HORVU7Hr1G061610.1 | Barley | cytosol | 11.32 | 93.8 |
| Os08t0318500-01 | Rice | plasma membrane | 88.03 | 88.94 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 22.64 | 86.74 |
| TraesCS7A01G284500.1 | Wheat | cytosol | 84.94 | 86.23 |
| TraesCS7B01G181500.1 | Wheat | cytosol | 29.56 | 84.49 |
| HORVU7Hr1G061640.1 | Barley | cytosol | 20.86 | 84.47 |
| TraesCS7D01G282100.6 | Wheat | plastid | 32.74 | 82.74 |
| VIT_13s0019g04810.t01 | Wine grape | cytosol | 6.17 | 76.74 |
| GSMUA_Achr3P23130_001 | Banana | cytosol | 16.09 | 75.77 |
| KRH34813 | Soybean | cytosol | 62.96 | 63.13 |
| KRG91961 | Soybean | endoplasmic reticulum | 62.58 | 62.82 |
| GSMUA_Achr3P23140_001 | Banana | cytosol | 48.64 | 61.98 |
| AT3G10380.1 | Thale cress | cytosol | 60.06 | 60.97 |
| CDY08608 | Canola | nucleus | 58.84 | 59.62 |
| Solyc11g008340.1.1 | Tomato | nucleus | 63.7 | 59.58 |
| CDY00928 | Canola | cytosol | 58.84 | 58.78 |
| CDY56705 | Canola | cytosol | 58.84 | 58.35 |
| CDX73930 | Canola | cytosol | 57.81 | 58.08 |
| CDY00666 | Canola | cytosol | 57.62 | 57.89 |
| CDY41338 | Canola | nucleus | 58.19 | 57.65 |
| Bra029834.1-P | Field mustard | cytosol | 58.93 | 57.17 |
| Bra001356.1-P | Field mustard | cytosol | 56.22 | 56.01 |
Protein Annotations
| MapMan:22.6.3.5 | UniProt:A0A1D6INK8 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 |
| ProteinID:ONM60856.1 | PFAM:PF04048 | PANTHER:PTHR14146 | InterPro:Sec8_exocyst | UniParc:UPI0008432698 | EnsemblPlantsGene:Zm00001d022502 |
| EnsemblPlants:Zm00001d022502_P003 | EnsemblPlants:Zm00001d022502_T003 | SEG:seg | : | : | : |
Description
Exocyst complex component SEC8
Coordinates
chr7:+:179002712..179046270
Molecular Weight (calculated)
118509.0 Da
IEP (calculated)
5.182
GRAVY (calculated)
-0.212
Length
1069 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSRSGPRRGI FDGLPIPADK SYLKESLSRI DESWAAARFD SLPHVVHILT SKDREGEIQF LKEQSDLIED VVDEVVHAYH HGFNKAIQNY SQILRLFSES
0101: AESITGLKGE MEEAKKLLGR KNKHLGQLWY RSLTLRHVLS LLDQVEDVAK VPARIENLMA EKQLYAAVQL QVQSVLILER EGLQAVGALQ DVRSDLTKLR
0201: GVLFYKILEE LHAHLYNNGE YSSAVLSMVD SEQAPTSTAT GRLVNSMQPL SRRTRSIKGD NHIGGPVDGF PKVSSVDGGS SFDGPDDNSL DMSESDGHTR
0301: KDSKSFSHEI PIFLSYATPD EFLESMIKAD APLNVKYLRT LVQCLSMLGK VAAAGAVIWY FSSYLFFNFL TEDQRVRPTI HDVITSKIKA CSEDASKSSM
0401: GKAAKTNDVL HSNGPTPRFQ MFTQKTKSGA SVMAAQLVVS PISPTMAPTG DAQRAATQLL RSIFECLVEI LENHIIVGEL LEQKSTSEVD NVNTPHIANG
0501: DASWNPDSES FQATGGFSVA FSLSVVQSEC QQLLCEILRA TPEAATADAA VQTARLANKD PVKEKRDGSE GLSFAFRITD AATPASNEGQ GWRRNSNVPQ
0601: EGYGTASVIP DQGIFLAASV YRPVFEFMNK IGLMLPQKYS QLGSDGLLAF VNNFLKEHFL PAIFVDYRKC VQQAISSPAA FRPRVHATSA YSSSVELGRP
0701: VLQGLLAIDI IAKEVLGWVQ LMPNYATELV EYVRTFLERA HERCRASYME AVLEKQSYIL LSRNDIESLM RLEPANISLQ NSTGEHDNNA TGAEAVEVEI
0801: ELSDLLLDMC PIKQENLIHD DQKLILLASL SDSLEYLADS VERLGESFIS PPTTSESINH SHGRHARSSS AIPKSLASLA NEYRRLAVDC VRVLRLEMQL
0901: EAIYHMQEMT KREYVEDQDA EDPDDFIISL TTQIARRDEE MAPYITESER NYIFGGISSV AANASIKALA QMKSINLLGV QQICRNSIAL EQALAAIPSI
1001: DSEAVQQRLD RVRTFYELLN LPFESLLGFI AEHEYLFSAK EYLSVLKVNV PGREIPADAE RRISQILGH
0101: AESITGLKGE MEEAKKLLGR KNKHLGQLWY RSLTLRHVLS LLDQVEDVAK VPARIENLMA EKQLYAAVQL QVQSVLILER EGLQAVGALQ DVRSDLTKLR
0201: GVLFYKILEE LHAHLYNNGE YSSAVLSMVD SEQAPTSTAT GRLVNSMQPL SRRTRSIKGD NHIGGPVDGF PKVSSVDGGS SFDGPDDNSL DMSESDGHTR
0301: KDSKSFSHEI PIFLSYATPD EFLESMIKAD APLNVKYLRT LVQCLSMLGK VAAAGAVIWY FSSYLFFNFL TEDQRVRPTI HDVITSKIKA CSEDASKSSM
0401: GKAAKTNDVL HSNGPTPRFQ MFTQKTKSGA SVMAAQLVVS PISPTMAPTG DAQRAATQLL RSIFECLVEI LENHIIVGEL LEQKSTSEVD NVNTPHIANG
0501: DASWNPDSES FQATGGFSVA FSLSVVQSEC QQLLCEILRA TPEAATADAA VQTARLANKD PVKEKRDGSE GLSFAFRITD AATPASNEGQ GWRRNSNVPQ
0601: EGYGTASVIP DQGIFLAASV YRPVFEFMNK IGLMLPQKYS QLGSDGLLAF VNNFLKEHFL PAIFVDYRKC VQQAISSPAA FRPRVHATSA YSSSVELGRP
0701: VLQGLLAIDI IAKEVLGWVQ LMPNYATELV EYVRTFLERA HERCRASYME AVLEKQSYIL LSRNDIESLM RLEPANISLQ NSTGEHDNNA TGAEAVEVEI
0801: ELSDLLLDMC PIKQENLIHD DQKLILLASL SDSLEYLADS VERLGESFIS PPTTSESINH SHGRHARSSS AIPKSLASLA NEYRRLAVDC VRVLRLEMQL
0901: EAIYHMQEMT KREYVEDQDA EDPDDFIISL TTQIARRDEE MAPYITESER NYIFGGISSV AANASIKALA QMKSINLLGV QQICRNSIAL EQALAAIPSI
1001: DSEAVQQRLD RVRTFYELLN LPFESLLGFI AEHEYLFSAK EYLSVLKVNV PGREIPADAE RRISQILGH
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
Arabidopsis Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.