Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08608 | Canola | nucleus | 93.26 | 93.08 |
| CDY00928 | Canola | cytosol | 93.45 | 91.96 |
| CDY41338 | Canola | nucleus | 92.5 | 90.27 |
| CDY56705 | Canola | cytosol | 92.4 | 90.26 |
| CDX73930 | Canola | cytosol | 90.98 | 90.04 |
| CDY00666 | Canola | cytosol | 90.98 | 90.04 |
| Bra029834.1-P | Field mustard | cytosol | 93.35 | 89.2 |
| Bra001356.1-P | Field mustard | cytosol | 88.41 | 86.77 |
| KRH34813 | Soybean | cytosol | 74.55 | 73.64 |
| KRG91961 | Soybean | endoplasmic reticulum | 74.36 | 73.52 |
| VIT_13s0019g04770.t01 | Wine grape | cytosol | 69.71 | 71.75 |
| HORVU7Hr1G061610.1 | Barley | cytosol | 8.45 | 68.99 |
| GSMUA_Achr3P23130_001 | Banana | cytosol | 14.72 | 68.28 |
| Solyc11g008340.1.1 | Tomato | nucleus | 72.93 | 67.19 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 16.71 | 63.08 |
| Os08t0318500-01 | Rice | plasma membrane | 61.35 | 61.06 |
| EER99853 | Sorghum | cytosol | 60.68 | 60.74 |
| TraesCS7B01G181500.1 | Wheat | cytosol | 21.56 | 60.7 |
| TraesCS7A01G284500.1 | Wheat | cytosol | 60.59 | 60.59 |
| Zm00001d022502_P003 | Maize | cytosol | 60.97 | 60.06 |
| TraesCS7D01G282100.6 | Wheat | plastid | 24.12 | 60.05 |
| GSMUA_Achr3P23140_001 | Banana | cytosol | 47.01 | 59.0 |
| HORVU7Hr1G061640.1 | Barley | cytosol | 14.72 | 58.71 |
Protein Annotations
| MapMan:22.6.3.5 | EntrezGene:820201 | UniProt:A0A178VA38 | ProteinID:AAF02806.1 | ProteinID:AEE74898.1 | EMBL:AK118541 |
| ArrayExpress:AT3G10380 | EnsemblPlantsGene:AT3G10380 | RefSeq:AT3G10380 | TAIR:AT3G10380 | RefSeq:AT3G10380-TAIR-G | EnsemblPlants:AT3G10380.1 |
| TAIR:AT3G10380.1 | EMBL:AY059763 | Unigene:At.19746 | GO:GO:0000003 | GO:GO:0000145 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005856 | GO:GO:0005886 | GO:GO:0006612 | GO:GO:0006810 | GO:GO:0006887 |
| GO:GO:0006893 | GO:GO:0006903 | GO:GO:0006904 | GO:GO:0007154 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009524 | GO:GO:0009791 | GO:GO:0009856 |
| GO:GO:0009875 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0030312 | GO:GO:0048354 |
| GO:GO:0060321 | GO:GO:0070062 | RefSeq:NP_566372.1 | ProteinID:OAP01843.1 | PFAM:PF04048 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR14146 | UniProt:Q93YU5 | Symbol:SEC8 | InterPro:Sec8_exocyst | UniParc:UPI0000004201 |
| SEG:seg | : | : | : | : | : |
Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
Coordinates
chr3:-:3219507..3229034
Molecular Weight (calculated)
116612.0 Da
IEP (calculated)
5.761
GRAVY (calculated)
-0.266
Length
1053 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.