Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra003706.1-P | plasma membrane |
| Bra008282.1-P | plasma membrane |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10380.1 | Bra003706.1-P | AT1G76850.1 | 24307681 |
| AT3G10380.1 | Bra008282.1-P | AT1G76850.1 | 24307681 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73930 | Canola | cytosol | 95.81 | 96.62 |
| AT3G10380.1 | Thale cress | cytosol | 86.77 | 88.41 |
| Bra029834.1-P | Field mustard | cytosol | 87.51 | 85.21 |
| KRG91961 | Soybean | endoplasmic reticulum | 68.31 | 68.83 |
| KRH34813 | Soybean | cytosol | 68.31 | 68.76 |
| VIT_13s0019g04770.t01 | Wine grape | cytosol | 64.03 | 67.16 |
| GSMUA_Achr3P23130_001 | Banana | cytosol | 14.07 | 66.52 |
| Solyc11g008340.1.1 | Tomato | nucleus | 67.19 | 63.08 |
| HORVU7Hr1G061620.1 | Barley | plasma membrane | 15.47 | 59.5 |
| TraesCS7B01G181500.1 | Wheat | cytosol | 20.13 | 57.75 |
| Os08t0318500-01 | Rice | plasma membrane | 56.94 | 57.75 |
| EER99853 | Sorghum | cytosol | 55.82 | 56.94 |
| TraesCS7A01G284500.1 | Wheat | cytosol | 55.45 | 56.51 |
| GSMUA_Achr3P23140_001 | Banana | cytosol | 44.18 | 56.5 |
| Zm00001d022502_P003 | Maize | cytosol | 56.01 | 56.22 |
| HORVU7Hr1G061610.1 | Barley | cytosol | 6.71 | 55.81 |
| HORVU7Hr1G061640.1 | Barley | cytosol | 13.51 | 54.92 |
| TraesCS7D01G282100.6 | Wheat | plastid | 21.16 | 53.66 |
Protein Annotations
| EnsemblPlants:Bra001356.1 | EnsemblPlants:Bra001356.1-P | EnsemblPlantsGene:Bra001356 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0015031 | InterPro:Sec8_exocyst | PANTHER:PTHR14146 | PFAM:PF04048 | SEG:seg | UniParc:UPI0002540629 |
| UniProt:M4CAX7 | MapMan:22.6.3.5 | : | : | : | : |
Description
AT3G10380 (E=0.0) SEC8, ATSEC8 | SEC8 (SUBUNIT OF EXOCYST COMPLEX 8)
Coordinates
chrA03:-:15983371..15991335
Molecular Weight (calculated)
119053.0 Da
IEP (calculated)
5.993
GRAVY (calculated)
-0.274
Length
1073 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGIFNDLPVP SDKTYLREEL ARIDESWAVA RFDSLPHVVH ILTSKDREAD IHVLREQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF RESTEKLGDL
0101: KHDLADAKKS LGTRNKQLHQ LWYRSMTLRH IISVLDQIES ISKVPSRIEN LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELS KLRGSLFFKI
0201: LDDLHAHLYN RGAYRQVSFQ LLYANFRSCA AFYPCSVASS IYERDDEVPT TTAVATSQMS SQPLSRRTRT LKGDSQFGAR GLTNGSHRSA SIEEGSSFDG
0301: HDEEDSVVHD EASADSKLLS YHLPPWLSDS TPDEFIEAIR KSDDPLHVKY LQTLVECLCM LGKVAAAGAI ICQKLRPTIH EIIISKIKAH METRNLSKSG
0401: SNQGDRTGAV GLHTIKGQSE AYRLSKDKPQ NGMPNSGSHL AMSPVSPLMA PGGKAQAAAK DLLDSILDTI VKIFENHVVI GELLELKASQ HDINTPKSLP
0501: TDVNWNTDPE ASQVTGGYTI SLPLTVLQSE CQQLICEILR ATPETASADA AAQTAKLAKK APKKDKRQVI LSIGSYYIHG DGFPNIMGAP EDGLTFTFRF
0601: TDATVSLSNQ GADLIRQGWG KRASNASQEG YGSAAVLPEQ GIYLAASIYR PVLQFTDKIT SMLPKKHSQL VNDGLLTFTE NFVKDHLLPT MFVDYRKGVQ
0701: QAISSAAAFR PRAHTSTYTP TVEKGRPILQ EEWMDTSHSM VLGWAQAMPK FATDLVKYVQ TFLERTFERC RTSYMEAVLE KLSYRLIGRH DIERLMRLDA
0801: ASACLPSSLG HSVSHSEAVG SGVELNDLFL SLPSIKQDNL IRDDNKLILL ASLSDSLEYV ADSIERLGQA VPRAASQDSN SRNQATSPRN LASFADEYRK
0901: LATDCLKVLR VEMQLETVFH LQEMTNREYL EDEDAEEPDD FVISLTSQIT RRDEGMAPFI SGEKRNYVFG GICGTAASAS IKALADMRSI NLFGVQQICR
1001: NTIALEQAMA AILYIDGESV QQNLDRVRTY FELLNMPFEA LLAFIAEHDQ MFTPTESASQ LLSSAINANS TVS
0101: KHDLADAKKS LGTRNKQLHQ LWYRSMTLRH IISVLDQIES ISKVPSRIEN LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELS KLRGSLFFKI
0201: LDDLHAHLYN RGAYRQVSFQ LLYANFRSCA AFYPCSVASS IYERDDEVPT TTAVATSQMS SQPLSRRTRT LKGDSQFGAR GLTNGSHRSA SIEEGSSFDG
0301: HDEEDSVVHD EASADSKLLS YHLPPWLSDS TPDEFIEAIR KSDDPLHVKY LQTLVECLCM LGKVAAAGAI ICQKLRPTIH EIIISKIKAH METRNLSKSG
0401: SNQGDRTGAV GLHTIKGQSE AYRLSKDKPQ NGMPNSGSHL AMSPVSPLMA PGGKAQAAAK DLLDSILDTI VKIFENHVVI GELLELKASQ HDINTPKSLP
0501: TDVNWNTDPE ASQVTGGYTI SLPLTVLQSE CQQLICEILR ATPETASADA AAQTAKLAKK APKKDKRQVI LSIGSYYIHG DGFPNIMGAP EDGLTFTFRF
0601: TDATVSLSNQ GADLIRQGWG KRASNASQEG YGSAAVLPEQ GIYLAASIYR PVLQFTDKIT SMLPKKHSQL VNDGLLTFTE NFVKDHLLPT MFVDYRKGVQ
0701: QAISSAAAFR PRAHTSTYTP TVEKGRPILQ EEWMDTSHSM VLGWAQAMPK FATDLVKYVQ TFLERTFERC RTSYMEAVLE KLSYRLIGRH DIERLMRLDA
0801: ASACLPSSLG HSVSHSEAVG SGVELNDLFL SLPSIKQDNL IRDDNKLILL ASLSDSLEYV ADSIERLGQA VPRAASQDSN SRNQATSPRN LASFADEYRK
0901: LATDCLKVLR VEMQLETVFH LQEMTNREYL EDEDAEEPDD FVISLTSQIT RRDEGMAPFI SGEKRNYVFG GICGTAASAS IKALADMRSI NLFGVQQICR
1001: NTIALEQAMA AILYIDGESV QQNLDRVRTY FELLNMPFEA LLAFIAEHDQ MFTPTESASQ LLSSAINANS TVS
0001: MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTESASQL YFR
0101: KHDLAEAKQS LGARNKQLHQ LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG ALQDVRSELT KLRGALFFKI
0201: LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG
0301: TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH
0401: LIKGQSEAYR LSKEKPQNGI SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI NTPRSLPTDV NWNTESEASQ
0501: ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS
0601: AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL
0701: AIDLLAKEVL GWAQAMPKFA TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA VSHSEAVGTE VELSDLFLSL
0801: RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE
0901: DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF
1001: ELLNMPFEAL LAFIAEHDQM FTPTESASQL YFR
Arabidopsis Description
SEC8SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.